FFCP PHASE1:Mm9::chr13:42804851..42804907,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=218194|HGNC=|MCL_coexpression_id=13|UniProt=Q2M3X8|association_with_transcript=-4bp_to_ENSMUST00000066928_5end|description=CAGE_peak_5_at_Phactr1_5end|id=chr13:42804851..42804907,+|ontology_enrichment_celltype=CL:0000117!4.81e-19!23;CL:0000337!4.81e-19!23;CL:0000540!6.19e-17!33;CL:0000047!6.19e-17!33;CL:0000031!6.19e-17!33;CL:0000404!6.19e-17!33;CL:0000393!2.76e-12!39;CL:0000211!2.76e-12!39;CL:0000221!5.92e-12!44;CL:0000133!5.92e-12!44;CL:0002319!1.05e-11!43;CL:0000055!2.51e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.33e-29,23;CL:0000337,1.33e-29,23;CL:0000540,9.54e-20,33;CL:0000047,9.54e-20,33;CL:0000031,9.54e-20,33;CL:0000404,9.54e-20,33;CL:0000393,1.80e-15,39;CL:0000211,1.80e-15,39;CL:0002319,2.64e-13,43;CL:0000221,7.91e-13,44;CL:0000133,7.91e-13,44;CL:0002609,6.35e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!9.93e-33!71;UBERON:0003075!9.93e-33!71;UBERON:0007284!9.93e-33!71;UBERON:0001017!7.02e-30!73;UBERON:0005743!7.02e-30!73;UBERON:0000073!7.55e-30!75;UBERON:0001016!7.55e-30!75;UBERON:0000033!3.49e-29!63;UBERON:0004121!5.15e-29!102;UBERON:0000924!5.15e-29!102;UBERON:0006601!5.15e-29!102;UBERON:0001049!5.47e-28!52;UBERON:0005068!5.47e-28!52;UBERON:0006241!5.47e-28!52;UBERON:0007135!5.47e-28!52;UBERON:0000955!3.92e-26!50;UBERON:0006238!3.92e-26!50;UBERON:0003056!8.65e-26!49;UBERON:0002616!2.03e-25!49;UBERON:0003080!2.09e-21!40;UBERON:0002020!5.72e-21!34;UBERON:0002780!1.50e-20!39;UBERON:0001890!1.50e-20!39;UBERON:0006240!1.50e-20!39;UBERON:0002791!1.05e-16!29;UBERON:0003528!1.05e-16!29;UBERON:0001893!1.05e-16!29;UBERON:0007811!6.24e-15!86;UBERON:0000153!2.62e-12!94;UBERON:0000956!3.32e-11!21;UBERON:0001869!3.32e-11!21;UBERON:0000203!3.32e-11!21;UBERON:0002619!1.48e-08!17;UBERON:0003076!4.82e-07!12;UBERON:0003057!4.82e-07!12;UBERON:0002420!7.62e-07!8;UBERON:0007245!7.62e-07!8;UBERON:0010009!7.62e-07!8;UBERON:0010011!7.62e-07!8;UBERON:0000454!7.62e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.69e-35,64;UBERON:0003075,2.69e-35,64;UBERON:0007284,2.69e-35,64;UBERON:0000073,3.43e-35,54;UBERON:0001049,2.56e-32,52;UBERON:0005068,2.56e-32,52;UBERON:0006241,2.56e-32,52;UBERON:0007135,2.56e-32,52;UBERON:0001017,4.86e-32,73;UBERON:0001016,8.72e-31,75;UBERON:0010371,3.81e-29,73;UBERON:0004121,4.23e-29,95;UBERON:0000924,4.23e-29,95;UBERON:0006601,4.23e-29,95;UBERON:0002020,4.41e-29,34;UBERON:0000955,1.01e-25,47;UBERON:0006238,1.01e-25,47;UBERON:0003056,4.32e-25,49;UBERON:0002616,1.06e-24,46;UBERON:0003528,1.99e-22,29;UBERON:0002791,1.99e-22,29;UBERON:0001893,1.99e-22,29;UBERON:0003080,1.25e-21,40;UBERON:0010314,3.17e-21,92;UBERON:0002780,2.01e-20,39;UBERON:0001890,2.01e-20,39;UBERON:0006240,2.01e-20,39;UBERON:0000956,3.94e-15,21;UBERON:0001869,3.94e-15,21;UBERON:0000203,3.94e-15,21;UBERON:0003076,3.50e-11,12;UBERON:0003057,3.50e-11,12;UBERON:0002619,5.19e-11,17;UBERON:0002240,3.14e-09,6;UBERON:0005174,3.14e-09,6;UBERON:0001137,3.14e-09,6;UBERON:0002420,1.64e-08,8;UBERON:0007245,1.64e-08,8;UBERON:0010009,1.64e-08,8;UBERON:0010011,1.64e-08,8;UBERON:0000454,1.64e-08,8;UBERON:0000025,3.22e-08,114;UBERON:0001948,4.30e-08,5;UBERON:0002315,4.30e-08,5;UBERON:0002021,6.35e-08,10;UBERON:0000411,6.35e-08,10;UBERON:0001950,6.35e-08,10;UBERON:0004111,5.49e-07,122|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,5.46254444320914,9.52183762689659,8.23980824558033,0,0,0,0,0,0,0,7.67303131082735,6.61529097825284,7.15104868594699,11.9973413449598,9.718215801871,6.00204916153275,7.3801012684042,3.67687514644008,8.8092704799511,15.0671058940522,14.8998337258556,9.10015385338338,13.4486836095542,11.9810075228055,9.49222196604695,3.93933827022176,8.40390362772456,10.606629077052,13.9524247183121,10.0655700745662,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.608930956624282,0.691846491768175,0.753613202763113,1.41106448562846,0,0,0,0,0,0,0,0,14.0534782565543,12.5668024088073,0,0,0,0,11.833460512981,0.457500602818626,9.29842205635197,4.69325664519146,1.79000820131231,6.2336413367868,2.92034273521964,0,0,0,3.36706969418358,0.260240885925407,0.229902104433473,0.720248519221397,1.9591626318643,2.85753296435577,3.33095672740609,7.30873451565885,6.20888089773638,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,9.46722433889417,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.758671603812327,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0.44292937929755,0,0.163863314715738,0,0.144649058581512,0,0,0,0,5.29816946959713,7.03270119553219,0,0,0,0.780877488593277,1.50796378412959,0,0.66839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| ||
|EntrezGene=218194 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=Q2M3X8 | |||
|association_with_transcript=-4bp_to_ENSMUST00000066928_5end | |||
|description=CAGE_peak_5_at_Phactr1_5end | |||
|id=chr13:42804851..42804907,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.81e-19!23;CL:0000337!4.81e-19!23;CL:0000540!6.19e-17!33;CL:0000047!6.19e-17!33;CL:0000031!6.19e-17!33;CL:0000404!6.19e-17!33;CL:0000393!2.76e-12!39;CL:0000211!2.76e-12!39;CL:0000221!5.92e-12!44;CL:0000133!5.92e-12!44;CL:0002319!1.05e-11!43;CL:0000055!2.51e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.33e-29,23;CL:0000337,1.33e-29,23;CL:0000540,9.54e-20,33;CL:0000047,9.54e-20,33;CL:0000031,9.54e-20,33;CL:0000404,9.54e-20,33;CL:0000393,1.80e-15,39;CL:0000211,1.80e-15,39;CL:0002319,2.64e-13,43;CL:0000221,7.91e-13,44;CL:0000133,7.91e-13,44;CL:0002609,6.35e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.93e-33!71;UBERON:0003075!9.93e-33!71;UBERON:0007284!9.93e-33!71;UBERON:0001017!7.02e-30!73;UBERON:0005743!7.02e-30!73;UBERON:0000073!7.55e-30!75;UBERON:0001016!7.55e-30!75;UBERON:0000033!3.49e-29!63;UBERON:0004121!5.15e-29!102;UBERON:0000924!5.15e-29!102;UBERON:0006601!5.15e-29!102;UBERON:0001049!5.47e-28!52;UBERON:0005068!5.47e-28!52;UBERON:0006241!5.47e-28!52;UBERON:0007135!5.47e-28!52;UBERON:0000955!3.92e-26!50;UBERON:0006238!3.92e-26!50;UBERON:0003056!8.65e-26!49;UBERON:0002616!2.03e-25!49;UBERON:0003080!2.09e-21!40;UBERON:0002020!5.72e-21!34;UBERON:0002780!1.50e-20!39;UBERON:0001890!1.50e-20!39;UBERON:0006240!1.50e-20!39;UBERON:0002791!1.05e-16!29;UBERON:0003528!1.05e-16!29;UBERON:0001893!1.05e-16!29;UBERON:0007811!6.24e-15!86;UBERON:0000153!2.62e-12!94;UBERON:0000956!3.32e-11!21;UBERON:0001869!3.32e-11!21;UBERON:0000203!3.32e-11!21;UBERON:0002619!1.48e-08!17;UBERON:0003076!4.82e-07!12;UBERON:0003057!4.82e-07!12;UBERON:0002420!7.62e-07!8;UBERON:0007245!7.62e-07!8;UBERON:0010009!7.62e-07!8;UBERON:0010011!7.62e-07!8;UBERON:0000454!7.62e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.69e-35,64;UBERON:0003075,2.69e-35,64;UBERON:0007284,2.69e-35,64;UBERON:0000073,3.43e-35,54;UBERON:0001049,2.56e-32,52;UBERON:0005068,2.56e-32,52;UBERON:0006241,2.56e-32,52;UBERON:0007135,2.56e-32,52;UBERON:0001017,4.86e-32,73;UBERON:0001016,8.72e-31,75;UBERON:0010371,3.81e-29,73;UBERON:0004121,4.23e-29,95;UBERON:0000924,4.23e-29,95;UBERON:0006601,4.23e-29,95;UBERON:0002020,4.41e-29,34;UBERON:0000955,1.01e-25,47;UBERON:0006238,1.01e-25,47;UBERON:0003056,4.32e-25,49;UBERON:0002616,1.06e-24,46;UBERON:0003528,1.99e-22,29;UBERON:0002791,1.99e-22,29;UBERON:0001893,1.99e-22,29;UBERON:0003080,1.25e-21,40;UBERON:0010314,3.17e-21,92;UBERON:0002780,2.01e-20,39;UBERON:0001890,2.01e-20,39;UBERON:0006240,2.01e-20,39;UBERON:0000956,3.94e-15,21;UBERON:0001869,3.94e-15,21;UBERON:0000203,3.94e-15,21;UBERON:0003076,3.50e-11,12;UBERON:0003057,3.50e-11,12;UBERON:0002619,5.19e-11,17;UBERON:0002240,3.14e-09,6;UBERON:0005174,3.14e-09,6;UBERON:0001137,3.14e-09,6;UBERON:0002420,1.64e-08,8;UBERON:0007245,1.64e-08,8;UBERON:0010009,1.64e-08,8;UBERON:0010011,1.64e-08,8;UBERON:0000454,1.64e-08,8;UBERON:0000025,3.22e-08,114;UBERON:0001948,4.30e-08,5;UBERON:0002315,4.30e-08,5;UBERON:0002021,6.35e-08,10;UBERON:0000411,6.35e-08,10;UBERON:0001950,6.35e-08,10;UBERON:0004111,5.49e-07,122 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,5.46254444320914,9.52183762689659,8.23980824558033,0,0,0,0,0,0,0,7.67303131082735,6.61529097825284,7.15104868594699,11.9973413449598,9.718215801871,6.00204916153275,7.3801012684042,3.67687514644008,8.8092704799511,15.0671058940522,14.8998337258556,9.10015385338338,13.4486836095542,11.9810075228055,9.49222196604695,3.93933827022176,8.40390362772456,10.606629077052,13.9524247183121,10.0655700745662,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.608930956624282,0.691846491768175,0.753613202763113,1.41106448562846,0,0,0,0,0,0,0,0,14.0534782565543,12.5668024088073,0,0,0,0,11.833460512981,0.457500602818626,9.29842205635197,4.69325664519146,1.79000820131231,6.2336413367868,2.92034273521964,0,0,0,3.36706969418358,0.260240885925407,0.229902104433473,0.720248519221397,1.9591626318643,2.85753296435577,3.33095672740609,7.30873451565885,6.20888089773638,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,9.46722433889417,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.758671603812327,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0.44292937929755,0,0.163863314715738,0,0.144649058581512,0,0,0,0,5.29816946959713,7.03270119553219,0,0,0,0.780877488593277,1.50796378412959,0,0.668396022247182,0.283076530788832,0,0.584511715822624,0.790575555893047,5.14114106274891,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,1.36175842301515,1.08036656418786,0.905510786479282,0.643011105094777,0.709360934569094,0.356737635204141,0.987294123612726,0.913394847343798,0,0,0,0,0,0,0,0,0,7.97328798645192,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.432021363287205,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.337912250981556,0,0.2604087696879,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915758121336325,0.428736758158132,0,1.12950368523413,2.30162618253588,0.572895513439397,5.499301834998,2.05524755931193,1.5107877947794,4.05013500139084,2.2516060161211,3.62513927187364,3.62432218226274,1.03787347584177,0,0.682934423016537,2.18796045361465,0.419226325255965,0.367687016900028,0.666740183404846,0.824140228955577,0.320919209591815,1.26348605881899,0.50695859978048,1.13175804831646,1.03005658216871,1.21647789569252,1.78049953762401,0.476293691283074,1.15884325944855,1.54327376370964,1.64834360321323,0.588795680537589,0.342869252385415,0.70990322463735,1.66905332963125,1.0174249164263,0.846984423737976,1.69229215783353,0.914639864363863,0.263069711437843,1.49384525230448,0,1.54225523561426,1.28055827088233,0,1.08455788830176,2.89359916471712,2.99772693525535,1.16965804222704,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Phactr1 | |||
}} |
Revision as of 00:33, 13 September 2013
Short description: | p5@Phactr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Phactr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -4bp_to_ENSMUST00000066928_5end |
EntrezGene: | Phactr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.33e-29 | 23 |
neuroblast (sensu Vertebrata) | 1.33e-29 | 23 |
neuron | 9.54e-20 | 33 |
neuronal stem cell | 9.54e-20 | 33 |
neuroblast | 9.54e-20 | 33 |
electrically signaling cell | 9.54e-20 | 33 |
electrically responsive cell | 1.80e-15 | 39 |
electrically active cell | 1.80e-15 | 39 |
neural cell | 2.64e-13 | 43 |
ectodermal cell | 7.91e-13 | 44 |
neurectodermal cell | 7.91e-13 | 44 |
neuron of cerebral cortex | 6.35e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.