FFCP PHASE1:Mm9::chr13:54712693..54712748,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74325|HGNC=|MCL_coexpression_id=2859|UniProt=Q6IRU5|association_with_transcript=0bp_to_ENSMUST00000091609_5end|description=CAGE_peak_1_at_Cltb_5end|id=chr13:54712693..54712748,-|ontology_enrichment_celltype=CL:0002321!5.82e-15!70;CL:0000220!5.82e-15!70;CL:0000055!5.46e-12!50;CL:0000221!3.58e-10!44;CL:0000133!3.58e-10!44;CL:0002319!4.68e-10!43;CL:0000117!2.50e-08!23;CL:0000337!2.50e-08!23;CL:0000333!4.69e-08!10;CL:0000095!4.69e-08!10;CL:0000243!4.69e-08!10;CL:0000123!4.69e-08!10;CL:0000125!4.69e-08!10;CL:0000030!4.69e-08!10;CL:0000339!4.69e-08!10;CL:0002453!7.59e-07!8|ontology_enrichment_celltype_v019_2=CL:0002321,5.82e-15,70;CL:0000221,3.58e-10,44;CL:0000133,3.58e-10,44;CL:0002319,4.68e-10,43;CL:0000117,2.50e-08,23;CL:0000337,2.50e-08,23;CL:0000333,4.69e-08,10;CL:0000095,4.69e-08,10;CL:0000243,4.69e-08,10;CL:0000123,4.69e-08,10;CL:0000125,4.69e-08,10;CL:0000030,4.69e-08,10;CL:0000339,4.69e-08,10;CL:0002453,7.59e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.48e-21!75;UBERON:0001016!1.48e-21!75;UBERON:0001017!2.94e-20!73;UBERON:0005743!2.94e-20!73;UBERON:0004121!5.92e-20!102;UBERON:0000924!5.92e-20!102;UBERON:0006601!5.92e-20!102;UBERON:0001049!1.35e-18!52;UBERON:0005068!1.35e-18!52;UBERON:0006241!1.35e-18!52;UBERON:0007135!1.35e-18!52;UBERON:0000955!2.75e-17!50;UBERON:0006238!2.75e-17!50;UBERON:0000033!6.43e-17!63;UBERON:0002616!6.61e-17!49;UBERON:0002346!2.96e-13!71;UBERON:0003075!2.96e-13!71;UBERON:0007284!2.96e-13!71;UBERON:0002020!3.08e-13!34;UBERON:0003080!1.05e-11!40;UBERON:0003056!1.86e-11!49;UBERON:0002780!2.33e-11!39;UBERON:0001890!2.33e-11!39;UBERON:0006240!2.33e-11!39;UBERON:0002791!1.68e-10!29;UBERON:0003528!1.68e-10!29;UBERON:0001893!1.68e-10!29;UBERON:0004111!7.00e-10!122;UBERON:0000025!1.92e-09!114;UBERON:0003076!3.34e-08!12;UBERON:0003057!3.34e-08!12;UBERON:0002619!1.06e-07!17;UBERON:0000956!1.53e-07!21;UBERON:0001869!1.53e-07!21;UBERON:0000203!1.53e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.19e-23,95;UBERON:0000924,3.19e-23,95;UBERON:0006601,3.19e-23,95;UBERON:0001016,1.48e-21,75;UBERON:0001017,2.94e-20,73;UBERON:0000073,7.47e-20,54;UBERON:0001049,1.35e-18,52;UBERON:0005068,1.35e-18,52;UBERON:0006241,1.35e-18,52;UBERON:0007135,1.35e-18,52;UBERON:0010371,2.66e-17,73;UBERON:0002346,1.60e-16,64;UBERON:0003075,1.60e-16,64;UBERON:0007284,1.60e-16,64;UBERON:0000955,1.71e-15,47;UBERON:0006238,1.71e-15,47;UBERON:0002616,4.03e-15,46;UBERON:0002020,3.08e-13,34;UBERON:0010314,1.65e-12,92;UBERON:0003080,1.05e-11,40;UBERON:0003056,1.86e-11,49;UBERON:0002780,2.33e-11,39;UBERON:0001890,2.33e-11,39;UBERON:0006240,2.33e-11,39;UBERON:0003528,1.68e-10,29;UBERON:0002791,1.68e-10,29;UBERON:0001893,1.68e-10,29;UBERON:0004111,7.00e-10,122;UBERON:0000025,1.92e-09,114;UBERON:0003076,3.34e-08,12;UBERON:0003057,3.34e-08,12;UBERON:0011216,4.39e-08,194;UBERON:0002619,1.06e-07,17;UBERON:0000956,1.53e-07,21;UBERON:0001869,1.53e-07,21;UBERON:0000203,1.53e-07,21|phase1_expression=47.5642075901238,107.484425552923,88.7248516809595,69.5667686005709,89.1594399304498,49.0207473982718,46.0216901973186,7.23090611272827,19.851209823385,19.6614202110475,8.90333434772626,10.2108363514031,8.56003649656029,9.79108507092771,15.3230490435205,19.0326751346436,25.1842276126133,4.41647031501533,7.95263714913285,5.51706547337439,52.3016234429079,7.64540324246817,3.39559725880616,39.5181284299714,38.0819406571502,85.560562653138,76.6756353163153,63.7794848750232,74.6792038463549,60.2352010126234,74.7231820908377,29.8464416526027,32.5984337419822,31.6963362030877,41.016930004681,45.8807621189439,48.3881374341815,2.09265815368454,6.2506827561904,2.61761871986899,0,0,0.971020706062307,90.2680184884889,84.7511144995142,59.1020541960615,240.194142714848,323.113281755822,317.885906416781,236.03789747618,285.85227295899,265.942244075197,7.3824346665404,12.3311564141929,15.4603147605533,72.5471609621371,62.7508233465877,78.3821580261712,85.7821794044695,78.8196559115329,84.2995766663218,182.298358253193,140.50857778556,43.1951864295072,30.6548572395762,43.3392870117121,133.921249401727,252.431426596261,42.3053618218589,49.5471793677305,45.2198666905471,172.533194579897,163.442720304194,44.9541233118881,53.6734637702124,51.4762520501612,110.115880999389,157.949237211377,164.205384050924,68.8446421951612,89.8408660175663,56.7795573906868,208.27051725503,126.621587257128,136.907230008022,109.601833796204,127.849769357594,102.706094649741,196.660924086279,129.605225583137,41.4506218843399,59.3692475117157,132.594410073011,77.1775564042078,53.2816662307089,42.1145273871495,53.0879908098022,50.7882361282612,68.3237192105545,57.2410110706751,55.6331508117888,47.4807966432976,129.950672250389,78.2173373468664,51.524867760669,54.9790908080964,48.0248222764044,52.8671363099248,9.83963957859253,39.4856089912434,26.7167403219849,26.1840311348441,24.6758582063983,23.5127319262091,20.4604350416126,34.1813128416717,113.462490190078,27.0400797440235,25.653706006546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| ||
|EntrezGene=74325 | |||
|HGNC= | |||
|MCL_coexpression_id=2859 | |||
|UniProt=Q6IRU5 | |||
|association_with_transcript=0bp_to_ENSMUST00000091609_5end | |||
|description=CAGE_peak_1_at_Cltb_5end | |||
|id=chr13:54712693..54712748,- | |||
|ontology_enrichment_celltype=CL:0002321!5.82e-15!70;CL:0000220!5.82e-15!70;CL:0000055!5.46e-12!50;CL:0000221!3.58e-10!44;CL:0000133!3.58e-10!44;CL:0002319!4.68e-10!43;CL:0000117!2.50e-08!23;CL:0000337!2.50e-08!23;CL:0000333!4.69e-08!10;CL:0000095!4.69e-08!10;CL:0000243!4.69e-08!10;CL:0000123!4.69e-08!10;CL:0000125!4.69e-08!10;CL:0000030!4.69e-08!10;CL:0000339!4.69e-08!10;CL:0002453!7.59e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.82e-15,70;CL:0000221,3.58e-10,44;CL:0000133,3.58e-10,44;CL:0002319,4.68e-10,43;CL:0000117,2.50e-08,23;CL:0000337,2.50e-08,23;CL:0000333,4.69e-08,10;CL:0000095,4.69e-08,10;CL:0000243,4.69e-08,10;CL:0000123,4.69e-08,10;CL:0000125,4.69e-08,10;CL:0000030,4.69e-08,10;CL:0000339,4.69e-08,10;CL:0002453,7.59e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.48e-21!75;UBERON:0001016!1.48e-21!75;UBERON:0001017!2.94e-20!73;UBERON:0005743!2.94e-20!73;UBERON:0004121!5.92e-20!102;UBERON:0000924!5.92e-20!102;UBERON:0006601!5.92e-20!102;UBERON:0001049!1.35e-18!52;UBERON:0005068!1.35e-18!52;UBERON:0006241!1.35e-18!52;UBERON:0007135!1.35e-18!52;UBERON:0000955!2.75e-17!50;UBERON:0006238!2.75e-17!50;UBERON:0000033!6.43e-17!63;UBERON:0002616!6.61e-17!49;UBERON:0002346!2.96e-13!71;UBERON:0003075!2.96e-13!71;UBERON:0007284!2.96e-13!71;UBERON:0002020!3.08e-13!34;UBERON:0003080!1.05e-11!40;UBERON:0003056!1.86e-11!49;UBERON:0002780!2.33e-11!39;UBERON:0001890!2.33e-11!39;UBERON:0006240!2.33e-11!39;UBERON:0002791!1.68e-10!29;UBERON:0003528!1.68e-10!29;UBERON:0001893!1.68e-10!29;UBERON:0004111!7.00e-10!122;UBERON:0000025!1.92e-09!114;UBERON:0003076!3.34e-08!12;UBERON:0003057!3.34e-08!12;UBERON:0002619!1.06e-07!17;UBERON:0000956!1.53e-07!21;UBERON:0001869!1.53e-07!21;UBERON:0000203!1.53e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.19e-23,95;UBERON:0000924,3.19e-23,95;UBERON:0006601,3.19e-23,95;UBERON:0001016,1.48e-21,75;UBERON:0001017,2.94e-20,73;UBERON:0000073,7.47e-20,54;UBERON:0001049,1.35e-18,52;UBERON:0005068,1.35e-18,52;UBERON:0006241,1.35e-18,52;UBERON:0007135,1.35e-18,52;UBERON:0010371,2.66e-17,73;UBERON:0002346,1.60e-16,64;UBERON:0003075,1.60e-16,64;UBERON:0007284,1.60e-16,64;UBERON:0000955,1.71e-15,47;UBERON:0006238,1.71e-15,47;UBERON:0002616,4.03e-15,46;UBERON:0002020,3.08e-13,34;UBERON:0010314,1.65e-12,92;UBERON:0003080,1.05e-11,40;UBERON:0003056,1.86e-11,49;UBERON:0002780,2.33e-11,39;UBERON:0001890,2.33e-11,39;UBERON:0006240,2.33e-11,39;UBERON:0003528,1.68e-10,29;UBERON:0002791,1.68e-10,29;UBERON:0001893,1.68e-10,29;UBERON:0004111,7.00e-10,122;UBERON:0000025,1.92e-09,114;UBERON:0003076,3.34e-08,12;UBERON:0003057,3.34e-08,12;UBERON:0011216,4.39e-08,194;UBERON:0002619,1.06e-07,17;UBERON:0000956,1.53e-07,21;UBERON:0001869,1.53e-07,21;UBERON:0000203,1.53e-07,21 | |||
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| |||
|short_description=p1@Cltb | |||
}} |
Revision as of 00:48, 13 September 2013
Short description: | p1@Cltb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cltb_5end |
Coexpression cluster: | MCL_coexpression_mm9:2859 |
Association with transcript: | 0bp_to_ENSMUST00000091609_5end |
EntrezGene: | Cltb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.82e-15 | 70 |
ectodermal cell | 3.58e-10 | 44 |
neurectodermal cell | 3.58e-10 | 44 |
neural cell | 4.68e-10 | 43 |
CNS neuron (sensu Vertebrata) | 2.50e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.50e-08 | 23 |
migratory neural crest cell | 4.69e-08 | 10 |
neuron associated cell | 4.69e-08 | 10 |
glial cell (sensu Vertebrata) | 4.69e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 4.69e-08 | 10 |
glial cell | 4.69e-08 | 10 |
glioblast | 4.69e-08 | 10 |
glioblast (sensu Vertebrata) | 4.69e-08 | 10 |
oligodendrocyte precursor cell | 7.59e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.