FFCP PHASE1:Mm9::chr13:55480530..55480540,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=51791|HGNC=|MCL_coexpression_id=88|UniProt=|association_with_transcript=0bp_to_ENSMUST00000135851,uc007qqr.1_5end|description=CAGE_peak_5_at_Rgs14_5end|id=chr13:55480530..55480540,+|ontology_enrichment_celltype=CL:0000239!5.14e-19!6;CL:0000677!5.14e-19!6;CL:0000212!5.14e-19!6;CL:0000584!5.14e-19!6;CL:0002563!1.67e-16!9;CL:0002251!1.67e-16!9;CL:0000075!3.31e-16!7;CL:0002076!1.65e-09!15;CL:0000066!8.77e-09!25;CL:0000223!6.94e-07!20|ontology_enrichment_celltype_v019_2=CL:0000239,6.30e-34,6;CL:0000677,6.30e-34,6;CL:0000584,6.30e-34,6;CL:0000075,3.50e-29,7;CL:0002563,7.58e-23,9;CL:0002251,7.58e-23,9;CL:0002076,6.10e-14,15;CL:0000223,1.40e-10,20;CL:0000066,1.49e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!8.31e-24!15;UBERON:0001242!4.88e-23!13;UBERON:0000060!4.88e-23!13;UBERON:0001262!4.88e-23!13;UBERON:0004786!4.88e-23!13;UBERON:0003350!1.67e-16!9;UBERON:0004808!1.67e-16!9;UBERON:0001277!1.67e-16!9;UBERON:0004923!4.71e-14!24;UBERON:0000485!2.52e-13!11;UBERON:0000160!1.31e-11!43;UBERON:0000331!1.47e-10!3;UBERON:0002116!1.47e-10!3;UBERON:0001204!1.47e-10!3;UBERON:0001168!1.47e-10!3;UBERON:0005409!5.61e-09!59|ontology_enrichment_uberon_v019_2=UBERON:0001242,8.68e-35,13;UBERON:0001262,8.68e-35,13;UBERON:0004786,8.68e-35,13;UBERON:0000344,3.27e-30,15;UBERON:0003350,7.58e-23,9;UBERON:0004808,7.58e-23,9;UBERON:0001277,7.58e-23,9;UBERON:0000160,6.69e-20,31;UBERON:0004923,4.99e-19,24;UBERON:0000485,8.33e-19,11;UBERON:0000331,1.59e-17,3;UBERON:0002116,1.59e-17,3;UBERON:0001204,1.59e-17,3;UBERON:0001168,1.59e-17,3;UBERON:0002108,2.08e-13,4;UBERON:0005409,3.25e-13,47|phase1_expression=0,2.79180326111489,2.72999543633722,13.3084252975005,12.0214975187123,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0,0.319984845586813,0,0.57423196411502,0.86152399231815,0,2.66032787238923,4.03248207615889,0.665191531965914,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85115396664481,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.240390899039938,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@Rgs14}} | ||
|EntrezGene=51791 | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000135851,uc007qqr.1_5end | |||
|description=CAGE_peak_5_at_Rgs14_5end | |||
|id=chr13:55480530..55480540,+ | |||
|ontology_enrichment_celltype=CL:0000239!5.14e-19!6;CL:0000677!5.14e-19!6;CL:0000212!5.14e-19!6;CL:0000584!5.14e-19!6;CL:0002563!1.67e-16!9;CL:0002251!1.67e-16!9;CL:0000075!3.31e-16!7;CL:0002076!1.65e-09!15;CL:0000066!8.77e-09!25;CL:0000223!6.94e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.30e-34,6;CL:0000677,6.30e-34,6;CL:0000584,6.30e-34,6;CL:0000075,3.50e-29,7;CL:0002563,7.58e-23,9;CL:0002251,7.58e-23,9;CL:0002076,6.10e-14,15;CL:0000223,1.40e-10,20;CL:0000066,1.49e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.31e-24!15;UBERON:0001242!4.88e-23!13;UBERON:0000060!4.88e-23!13;UBERON:0001262!4.88e-23!13;UBERON:0004786!4.88e-23!13;UBERON:0003350!1.67e-16!9;UBERON:0004808!1.67e-16!9;UBERON:0001277!1.67e-16!9;UBERON:0004923!4.71e-14!24;UBERON:0000485!2.52e-13!11;UBERON:0000160!1.31e-11!43;UBERON:0000331!1.47e-10!3;UBERON:0002116!1.47e-10!3;UBERON:0001204!1.47e-10!3;UBERON:0001168!1.47e-10!3;UBERON:0005409!5.61e-09!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,8.68e-35,13;UBERON:0001262,8.68e-35,13;UBERON:0004786,8.68e-35,13;UBERON:0000344,3.27e-30,15;UBERON:0003350,7.58e-23,9;UBERON:0004808,7.58e-23,9;UBERON:0001277,7.58e-23,9;UBERON:0000160,6.69e-20,31;UBERON:0004923,4.99e-19,24;UBERON:0000485,8.33e-19,11;UBERON:0000331,1.59e-17,3;UBERON:0002116,1.59e-17,3;UBERON:0001204,1.59e-17,3;UBERON:0001168,1.59e-17,3;UBERON:0002108,2.08e-13,4;UBERON:0005409,3.25e-13,47 | |||
|phase1_expression=0,2.79180326111489,2.72999543633722,13.3084252975005,12.0214975187123,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0,0.319984845586813,0,0.57423196411502,0.86152399231815,0,2.66032787238923,4.03248207615889,0.665191531965914,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85115396664481,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.240390899039938,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Rgs14 | |||
}} |
Revision as of 00:50, 13 September 2013
Short description: | p5@Rgs14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rgs14_5end |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | 0bp_to_ENSMUST00000135851, uc007qqr.1_5end |
EntrezGene: | Rgs14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.30e-34 | 6 |
gut absorptive cell | 6.30e-34 | 6 |
enterocyte | 6.30e-34 | 6 |
columnar/cuboidal epithelial cell | 3.50e-29 | 7 |
intestinal epithelial cell | 7.58e-23 | 9 |
epithelial cell of alimentary canal | 7.58e-23 | 9 |
endo-epithelial cell | 6.10e-14 | 15 |
endodermal cell | 1.40e-10 | 20 |
epithelial cell | 1.49e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 8.68e-35 | 13 |
wall of intestine | 8.68e-35 | 13 |
gastrointestinal system mucosa | 8.68e-35 | 13 |
mucosa | 3.27e-30 | 15 |
epithelium of mucosa | 7.58e-23 | 9 |
gastrointestinal system epithelium | 7.58e-23 | 9 |
intestinal epithelium | 7.58e-23 | 9 |
intestine | 6.69e-20 | 31 |
organ component layer | 4.99e-19 | 24 |
simple columnar epithelium | 8.33e-19 | 11 |
ileal mucosa | 1.59e-17 | 3 |
ileum | 1.59e-17 | 3 |
mucosa of small intestine | 1.59e-17 | 3 |
wall of small intestine | 1.59e-17 | 3 |
small intestine | 2.08e-13 | 4 |
gastrointestinal system | 3.25e-13 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.