FFCP PHASE1:Hg19::chr3:57960752..57960764,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:57960752..57960764,-|id=chr3:57960752..57960764,-|ontology_enrichment_celltype=CL:0000066!9.58e-08!254|ontology_enrichment_celltype_v019=CL:0000222;3.28e-23;1!CL:0000319;3.28e-23;1!CL:0002097;1.65e-12;2!CL:0000159;2.59e-12;2!CL:0002593;2.59e-12;2!CL:0000174;8.96e-09;3|ontology_enrichment_celltype_v019_2=CL:0000319,3.28e-23,1;CL:0002097,1.65e-12,2;CL:0000159,2.59e-12,2;CL:0002593,3.62e-12,2;CL:0000174,8.96e-09,3|ontology_enrichment_development_v019=UBERON:0009847;1.98e-30;3!UBERON:0003353;1.98e-30;3!UBERON:0006238;5.86e-09;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3030;3.28e-23;1!DOID:3093;2.75e-08;11|ontology_enrichment_disease_v019_2=DOID:3030,3.28e-23,1;DOID:3093,2.85e-08,11|ontology_enrichment_uberon=UBERON:0000162!2.08e-10!14;UBERON:0001353!2.08e-10!14;UBERON:0000163!2.08e-10!14;UBERON:0006866!2.08e-10!14;UBERON:0000164!2.08e-10!14;UBERON:0000931!2.08e-10!14;UBERON:0002367!1.40e-09!11;UBERON:0010147!1.40e-09!11;UBERON:0009846!1.40e-09!11;UBERON:0003353!1.40e-09!11;UBERON:0004902!1.40e-09!11;UBERON:0003820!1.40e-09!11;UBERON:0009847!1.40e-09!11;UBERON:0004122!1.54e-09!15;UBERON:0003937!1.29e-08!12;UBERON:0005399!1.29e-08!12;UBERON:0003064!1.22e-07!37;UBERON:0006554!2.00e-07!44;UBERON:0001008!3.73e-07!45;UBERON:0001046!5.36e-07!19|ontology_enrichment_uberon_v019=UBERON:0002456;2.59e-12;2!UBERON:0002367;4.80e-09;11!UBERON:0010147;4.80e-09;11!UBERON:0002369;8.96e-09;3!UBERON:0001235;8.96e-09;3!UBERON:0006858;8.96e-09;3!UBERON:0003937;2.29e-08;12!UBERON:0005399;2.29e-08;12|ontology_enrichment_uberon_v019_2=UBERON:0002456,3.62e-12,2;UBERON:0002367,5.00e-09,11;UBERON:0010147,5.00e-09,11;UBERON:0009846,5.00e-09,11;UBERON:0003353,5.00e-09,11;UBERON:0004902,5.00e-09,11;UBERON:0003820,5.00e-09,11;UBERON:0009847,5.00e-09,11;UBERON:0002369,8.96e-09,3;UBERON:0001235,8.96e-09,3;UBERON:0006858,8.96e-09,3;UBERON:0003937,2.37e-08,12;UBERON:0005399,2.37e-08,12;UBERON:0003064,8.59e-08,28;UBERON:0000162,2.77e-07,14;UBERON:0001353,2.77e-07,14;UBERON:0000163,2.77e-07,14;UBERON:0006866,2.77e-07,14;UBERON:0000164,2.77e-07,14;UBERON:0000931,2.77e-07,14;UBERON:0004122,7.41e-07,15|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.492484232307152,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755751887377619,0,0.232429036905685,0,0,0.28769239232215,0,0.47296445977717,0,0,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0.560677600142307,0,0.74000264525148,0,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.788512075169673,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0.229628896329213,0,0.131124414959424,0,0.15403067420883,0.784349769176855,0,0.316654886678627,0,0.340187410553031,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0.288666338176536,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0.409074730008619,0,0.311039587661807,0.449341755736634,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.146178634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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:57960752..57960764,- | |||
|id=chr3:57960752..57960764,- | |||
|ontology_enrichment_celltype=CL:0000066!9.58e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000222;3.28e-23;1!CL:0000319;3.28e-23;1!CL:0002097;1.65e-12;2!CL:0000159;2.59e-12;2!CL:0002593;2.59e-12;2!CL:0000174;8.96e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,3.28e-23,1;CL:0002097,1.65e-12,2;CL:0000159,2.59e-12,2;CL:0002593,3.62e-12,2;CL:0000174,8.96e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.98e-30;3!UBERON:0003353;1.98e-30;3!UBERON:0006238;5.86e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;3.28e-23;1!DOID:3093;2.75e-08;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,3.28e-23,1;DOID:3093,2.85e-08,11 | |||
|ontology_enrichment_uberon=UBERON:0000162!2.08e-10!14;UBERON:0001353!2.08e-10!14;UBERON:0000163!2.08e-10!14;UBERON:0006866!2.08e-10!14;UBERON:0000164!2.08e-10!14;UBERON:0000931!2.08e-10!14;UBERON:0002367!1.40e-09!11;UBERON:0010147!1.40e-09!11;UBERON:0009846!1.40e-09!11;UBERON:0003353!1.40e-09!11;UBERON:0004902!1.40e-09!11;UBERON:0003820!1.40e-09!11;UBERON:0009847!1.40e-09!11;UBERON:0004122!1.54e-09!15;UBERON:0003937!1.29e-08!12;UBERON:0005399!1.29e-08!12;UBERON:0003064!1.22e-07!37;UBERON:0006554!2.00e-07!44;UBERON:0001008!3.73e-07!45;UBERON:0001046!5.36e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;2.59e-12;2!UBERON:0002367;4.80e-09;11!UBERON:0010147;4.80e-09;11!UBERON:0002369;8.96e-09;3!UBERON:0001235;8.96e-09;3!UBERON:0006858;8.96e-09;3!UBERON:0003937;2.29e-08;12!UBERON:0005399;2.29e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,3.62e-12,2;UBERON:0002367,5.00e-09,11;UBERON:0010147,5.00e-09,11;UBERON:0009846,5.00e-09,11;UBERON:0003353,5.00e-09,11;UBERON:0004902,5.00e-09,11;UBERON:0003820,5.00e-09,11;UBERON:0009847,5.00e-09,11;UBERON:0002369,8.96e-09,3;UBERON:0001235,8.96e-09,3;UBERON:0006858,8.96e-09,3;UBERON:0003937,2.37e-08,12;UBERON:0005399,2.37e-08,12;UBERON:0003064,8.59e-08,28;UBERON:0000162,2.77e-07,14;UBERON:0001353,2.77e-07,14;UBERON:0000163,2.77e-07,14;UBERON:0006866,2.77e-07,14;UBERON:0000164,2.77e-07,14;UBERON:0000931,2.77e-07,14;UBERON:0004122,7.41e-07,15 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.492484232307152,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755751887377619,0,0.232429036905685,0,0,0.28769239232215,0,0.47296445977717,0,0,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0.560677600142307,0,0.74000264525148,0,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.788512075169673,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0.229628896329213,0,0.131124414959424,0,0.15403067420883,0.784349769176855,0,0.316654886678627,0,0.340187410553031,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0.288666338176536,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0.409074730008619,0,0.311039587661807,0.449341755736634,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.146178634172371,0.328461828212837,0.0969890164884194,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,1.08723364858891,1.255234155748,0.407992870545287,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0.171086837884329,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0.400027764663154,0,0,1.26184898228651,3.08191728651685,0,0.260994291965212,0,0,0.244736704506468,0.358177682162975,0,0,0,0,0,0.256241518587947,0.690860683462397,0.303859956177382,0,0,0,0,0,1.2288645437686,0.422624246717254,0,0,0,0.567515953566836,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945550727071746,1.11231401892069,4.08164082822673,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.940634592723046,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.448527450322454,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr3:57960752..57960764,- | |||
}} |
Revision as of 01:00, 13 September 2013
Short description: | p@chr3:57960752..57960764, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:57960752..57960764, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 3.28e-23 | 1 |
cortical cell of adrenal gland | 1.65e-12 | 2 |
seromucus secreting cell | 2.59e-12 | 2 |
smooth muscle cell of the internal thoracic artery | 3.62e-12 | 2 |
steroid hormone secreting cell | 8.96e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 3.62e-12 | 2 |
prostate gland | 5.00e-09 | 11 |
male accessory sex gland | 5.00e-09 | 11 |
embryonic cloacal epithelium | 5.00e-09 | 11 |
epithelium of hindgut | 5.00e-09 | 11 |
urogenital sinus epithelium | 5.00e-09 | 11 |
prostate bud | 5.00e-09 | 11 |
prostate field | 5.00e-09 | 11 |
adrenal gland | 8.96e-09 | 3 |
adrenal cortex | 8.96e-09 | 3 |
adrenal/interrenal gland | 8.96e-09 | 3 |
sex gland | 2.37e-08 | 12 |
male reproductive gland | 2.37e-08 | 12 |
intermediate mesoderm | 8.59e-08 | 28 |
cloaca | 2.77e-07 | 14 |
anal region | 2.77e-07 | 14 |
embryonic cloaca | 2.77e-07 | 14 |
terminal part of digestive tract | 2.77e-07 | 14 |
primitive urogenital sinus | 2.77e-07 | 14 |
proctodeum | 2.77e-07 | 14 |
genitourinary system | 7.41e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 3.28e-23 | 1 |
nervous system cancer | 2.85e-08 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.