FFCP PHASE1:Hg19::chr3:69101359..69101374,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7110|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11870|TSSclassifier=S|UniProt=F8WF45|association_with_transcript=66bp_to_ENST00000488010_5end|coexpression_cluster_id=C22|description=CAGE_peak_6_at_TMF1_5end|id=chr3:69101359..69101374,-|ontology_enrichment_celltype=CL:0000738!1.68e-10!140;CL:0000766!9.76e-09!76;CL:0000037!6.05e-08!172;CL:0000566!6.05e-08!172;CL:0002031!7.16e-07!124;CL:0000557!8.95e-07!71;CL:0002057!9.82e-07!42|ontology_enrichment_celltype_v019=CL:0000624;3.01e-25;6!CL:0000791;7.68e-18;18!CL:0000789;7.68e-18;18!CL:0002419;7.68e-18;18!CL:0000898;1.50e-13;3!CL:0000623;2.52e-13;3!CL:0000097;5.51e-13;5!CL:0000084;2.38e-12;25!CL:0000094;3.75e-12;8!CL:0000815;1.70e-09;2!CL:0000792;1.70e-09;2!CL:0002677;1.70e-09;2!CL:0000771;3.79e-09;2!CL:0000081;9.25e-09;11!CL:0000163;3.07e-07;9!CL:0000766;9.53e-07;69|ontology_enrichment_celltype_v019_2=CL:0000738,4.29e-26,136;CL:0000624,3.06e-25,6;CL:0000037,1.26e-19,168;CL:0000988,3.14e-18,177;CL:0002032,5.22e-18,161;CL:0000837,5.22e-18,161;CL:0002031,6.34e-18,120;CL:0000791,7.92e-18,18;CL:0000789,7.92e-18,18;CL:0002420,7.92e-18,18;CL:0002419,7.92e-18,18;CL:0000790,7.92e-18,18;CL:0002087,3.54e-14,115;CL:0000898,1.48e-13,3;CL:0000623,2.15e-13,3;CL:0000825,2.15e-13,3;CL:0000097,3.05e-13,5;CL:0002028,3.05e-13,5;CL:0000766,4.18e-13,72;CL:0000084,2.43e-12,25;CL:0000827,2.43e-12,25;CL:0000094,2.97e-12,8;CL:0000838,7.78e-11,52;CL:0000542,1.41e-10,53;CL:0000051,1.41e-10,53;CL:0000815,1.67e-09,2;CL:0000792,1.67e-09,2;CL:0002677,1.67e-09,2;CL:0000771,3.80e-09,2;CL:0000081,7.84e-09,11;CL:0000763,1.59e-08,108;CL:0000049,1.59e-08,108;CL:0000557,3.22e-08,67;CL:0000134,1.05e-07,354;CL:0002320,2.15e-07,361;CL:0000163,2.24e-07,9;CL:0000839,4.41e-07,66|ontology_enrichment_development_v019=CL:0000790;7.68e-18;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.58e-07,98;UBERON:0003061,1.58e-07,98;UBERON:0002384,5.66e-07,371;UBERON:0002371,6.36e-07,76|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0.247532705920093,0.662794751455832,0.672325146451775,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0.125542639594803,0.229240217243854,0.0821005894499457,0.0787107813136792,1.57345710739562,0.767658796194425,1.39334510984468,0,0,0.369754010166788,0.0774672005803016,0.284338464974843,0.587200878669695,1.10799081706375,0.401088894940283,1.51907609501096,0.447830948479849,0,0.257575567634187,0.436194716338694,0.755751887377619,0.242584061187816,0.697287110717054,0.411167888021826,0.929119112685311,0.575384784644301,0.256160706529101,0.709446689665756,0.689491361473237,0,1.35426486594342,0,0.272906150057846,0.674170453335254,0,0.962787081228281,0,0,0.199463657621632,0.852449501065388,1.7412554317715,1.13477044938228,1.86846674698672,0.251248665256743,1.5644487552606,0.65156653411535,0,0.736555271975129,0,0.422510572623884,1.27562579979026,0,0.22465726229299,0.300353785683013,0.16072558669708,0.570025487482497,0,0,0,0,0,0,0.400395987036012,0,0,0,0,1.17447437874188,0.382273228125229,0,0.560508562981536,0.263384084775077,2.9506465517075,3.53709686474248,3.08402248499264,0.668745981562712,3.91106719960308,2.8406868344084,1.94826728407911,0.334231370655521,2.3568472597987,1.55073726208535,2.16643091012012,0.128091319725675,0.520237390239513,0.328875809207352,0.276350017785848,0.289803085735052,1.33457906845854,1.87278579662799,1.04535523804977,0.113309342697566,4.21542542962113,3.09264700934367,3.54227568827304,0.637130828648193,0.651083453856419,0,0.301150238155546,0,0,0,0,6.45141578319144,5.34880391567015,4.19990771260117,0,0,0.383587685530591,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.175669571386252,0.0654895377488563,0,0,0,0.174129737299267,0,0.476981248610684,0.571994910780128,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,1.31780417436063,3.87780264148325,0,0.993943903390637,0.25326102332916,0.926864265692532,0.286836620748814,0,0.560677600142307,0,0,0,0,0.163461903113459,0.302714855289863,0.576175924479999,0,0.936480230490962,0.570471821544449,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0,0.150238058906597,0,0.89694817844431,0.213557388818567,0,0.300091096084402,0.103052529238439,0.515281080091258,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0.484938170456436,1.06502877754984,0.10075209822764,0,0.193260853163297,0,0,0,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0.220587945464788,0,0,0.539325232640658,0.196221465125346,0.769494313892781,0,0,0,0,1.26755034821831,0,0,0,0.614942192715568,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7110 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11870 | |||
|TSSclassifier=S | |||
|UniProt=F8WF45 | |||
|association_with_transcript=66bp_to_ENST00000488010_5end | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_6_at_TMF1_5end | |||
|id=chr3:69101359..69101374,- | |||
|ontology_enrichment_celltype=CL:0000738!1.68e-10!140;CL:0000766!9.76e-09!76;CL:0000037!6.05e-08!172;CL:0000566!6.05e-08!172;CL:0002031!7.16e-07!124;CL:0000557!8.95e-07!71;CL:0002057!9.82e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000624;3.01e-25;6!CL:0000791;7.68e-18;18!CL:0000789;7.68e-18;18!CL:0002419;7.68e-18;18!CL:0000898;1.50e-13;3!CL:0000623;2.52e-13;3!CL:0000097;5.51e-13;5!CL:0000084;2.38e-12;25!CL:0000094;3.75e-12;8!CL:0000815;1.70e-09;2!CL:0000792;1.70e-09;2!CL:0002677;1.70e-09;2!CL:0000771;3.79e-09;2!CL:0000081;9.25e-09;11!CL:0000163;3.07e-07;9!CL:0000766;9.53e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.29e-26,136;CL:0000624,3.06e-25,6;CL:0000037,1.26e-19,168;CL:0000988,3.14e-18,177;CL:0002032,5.22e-18,161;CL:0000837,5.22e-18,161;CL:0002031,6.34e-18,120;CL:0000791,7.92e-18,18;CL:0000789,7.92e-18,18;CL:0002420,7.92e-18,18;CL:0002419,7.92e-18,18;CL:0000790,7.92e-18,18;CL:0002087,3.54e-14,115;CL:0000898,1.48e-13,3;CL:0000623,2.15e-13,3;CL:0000825,2.15e-13,3;CL:0000097,3.05e-13,5;CL:0002028,3.05e-13,5;CL:0000766,4.18e-13,72;CL:0000084,2.43e-12,25;CL:0000827,2.43e-12,25;CL:0000094,2.97e-12,8;CL:0000838,7.78e-11,52;CL:0000542,1.41e-10,53;CL:0000051,1.41e-10,53;CL:0000815,1.67e-09,2;CL:0000792,1.67e-09,2;CL:0002677,1.67e-09,2;CL:0000771,3.80e-09,2;CL:0000081,7.84e-09,11;CL:0000763,1.59e-08,108;CL:0000049,1.59e-08,108;CL:0000557,3.22e-08,67;CL:0000134,1.05e-07,354;CL:0002320,2.15e-07,361;CL:0000163,2.24e-07,9;CL:0000839,4.41e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000790;7.68e-18;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.58e-07,98;UBERON:0003061,1.58e-07,98;UBERON:0002384,5.66e-07,371;UBERON:0002371,6.36e-07,76 | |||
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| |||
|short_description=p6@TMF1 | |||
}} |
Revision as of 01:14, 13 September 2013
Short description: | p6@TMF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_TMF1_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 66bp_to_ENST00000488010_5end |
EntrezGene: | TMF1 |
HGNC: | 11870 |
UniProt: | F8WF45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.58e-07 | 98 |
blood island | 1.58e-07 | 98 |
connective tissue | 5.66e-07 | 371 |
bone marrow | 6.36e-07 | 76 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.