FFCP PHASE1:Hg19::chr3:8590309..8590333,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C315|description=CAGE_peak_at_chr3:8590309..8590333,+|id=chr3:8590309..8590333,+|ontology_enrichment_celltype=CL:0000136!1.45e-12!15|ontology_enrichment_celltype_v019=CL:0000136;5.29e-39;13!CL:0002615;5.53e-17;3!CL:0002579;3.24e-16;3!CL:0002521;3.32e-16;3!CL:0002334;3.71e-15;12!CL:0002617;5.29e-12;2!CL:0002580;3.80e-08;3!CL:0000511;8.90e-07;1!CL:0002625;8.90e-07;1!CL:0000216;8.90e-07;1|ontology_enrichment_celltype_v019_2=CL:0000136,1.49e-33,15;CL:0002615,5.26e-17,3;CL:0002521,2.70e-16,3;CL:0002579,6.20e-16,3;CL:0002334,4.85e-15,12;CL:0002617,5.16e-12,2;CL:0002580,3.95e-08,3;CL:0000511,8.67e-07,1;CL:0002625,8.67e-07,1;CL:0000216,8.67e-07,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004457!1.36e-08!12;UBERON:0000042!1.36e-08!12;UBERON:0003688!1.87e-08!6;UBERON:0002358!1.87e-08!6;UBERON:0003684!1.87e-08!6;UBERON:0001178!1.87e-08!6|ontology_enrichment_uberon_v019=UBERON:0003688;2.08e-31;6!UBERON:0002358;2.08e-31;6!UBERON:0003684;2.08e-31;6!UBERON:0001178;2.08e-31;6!UBERON:0004457;8.06e-28;9!UBERON:0000042;8.06e-28;9!UBERON:0002190;3.32e-16;3!UBERON:0001013;1.03e-12;14!UBERON:0005406;2.47e-11;2!UBERON:0002072;6.34e-10;5!UBERON:0000310;7.06e-09;10!UBERON:0001443;4.49e-08;11!UBERON:0001136;8.90e-07;1!UBERON:0001389;8.90e-07;1!UBERON:0001343;8.90e-07;1!UBERON:0000026;8.90e-07;1!UBERON:0008784;8.90e-07;1!UBERON:0006058;8.90e-07;1!UBERON:0003663;8.90e-07;1!UBERON:0004256;8.90e-07;1!UBERON:0004708;8.90e-07;1!UBERON:0002101;8.90e-07;1!UBERON:0004709;8.90e-07;1!UBERON:0002529;8.90e-07;1!UBERON:0010538;8.90e-07;1!UBERON:0003661;8.90e-07;1!UBERON:0010890;8.90e-07;1!UBERON:0002471;8.90e-07;1!UBERON:0001383;8.90e-07;1!UBERON:0004910;8.90e-07;1!UBERON:0010758;8.90e-07;1!UBERON:0010707;8.90e-07;1!UBERON:0004813;8.90e-07;1!UBERON:0000978;8.90e-07;1!UBERON:0002103;8.90e-07;1!UBERON:0001665;8.90e-07;1!UBERON:0003823;8.90e-07;1!UBERON:0000154;8.90e-07;1!UBERON:0010709;8.90e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.82e-31,6;UBERON:0002358,3.82e-31,6;UBERON:0003684,3.82e-31,6;UBERON:0001178,3.82e-31,6;UBERON:0004457,1.46e-20,12;UBERON:0000042,1.46e-20,12;UBERON:0002190,2.70e-16,3;UBERON:0001013,9.15e-13,14;UBERON:0005406,2.06e-11,2;UBERON:0002072,5.61e-10,5;UBERON:0000310,7.14e-09,10;UBERON:0004458,8.41e-09,49;UBERON:0001443,4.54e-08,11;UBERON:0003886,7.44e-08,54;UBERON:0002323,1.11e-07,46;UBERON:0004923,2.25e-07,66;UBERON:0001136,8.67e-07,1;UBERON:0001343,8.67e-07,1;UBERON:0004910,8.67e-07,1;UBERON:0005154,8.67e-07,1;UBERON:0005295,8.67e-07,1;UBERON:0004813,8.67e-07,1;UBERON:0005297,8.67e-07,1;UBERON:0005294,8.67e-07,1;UBERON:0010141,8.67e-07,1;UBERON:0005891,8.67e-07,1;UBERON:0005418,9.15e-07,1;UBERON:0001389,9.15e-07,1;UBERON:0000026,9.15e-07,1;UBERON:0008784,9.15e-07,1;UBERON:0006058,9.15e-07,1;UBERON:0003663,9.15e-07,1;UBERON:0004256,9.15e-07,1;UBERON:0004708,9.15e-07,1;UBERON:0002101,9.15e-07,1;UBERON:0004709,9.15e-07,1;UBERON:0002529,9.15e-07,1;UBERON:0010538,9.15e-07,1;UBERON:0003661,9.15e-07,1;UBERON:0010890,9.15e-07,1;UBERON:0002471,9.15e-07,1;UBERON:0001383,9.15e-07,1;UBERON:0004357,9.15e-07,1;UBERON:0004347,9.15e-07,1;UBERON:0005420,9.15e-07,1;UBERON:0005732,9.15e-07,1;UBERON:0010758,9.15e-07,1;UBERON:0010707,9.15e-07,1;UBERON:0000978,9.15e-07,1;UBERON:0002103,9.15e-07,1;UBERON:0001665,9.15e-07,1;UBERON:0003823,9.15e-07,1;UBERON:0000154,9.15e-07,1;UBERON:0010709,9.15e-07,1;UBERON:0005733,9.15e-07,1;UBERON:0005730,9.15e-07,1;UBERON:0002553,9.42e-07,61|phase1_expression=5.26867299884614,4.92431204949261,3.52386010239928,4.00293193412522,5.36353313312745,3.48935409640147,7.59899634504932,1.89515962028049,1.30592814099919,0,0.697801167972428,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.869079113764942,1.5905718941022,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,0.633152558322899,0.132409180813219,0.573673241497627,0,0,0,0.49333509683432,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.600952235626387,0,0,0.640672166455702,0.423863802319124,0,0.412210116953756,0,0.744467425326359,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C315 | |||
|description=CAGE_peak_at_chr3:8590309..8590333,+ | |||
|id=chr3:8590309..8590333,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.45e-12!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.29e-39;13!CL:0002615;5.53e-17;3!CL:0002579;3.24e-16;3!CL:0002521;3.32e-16;3!CL:0002334;3.71e-15;12!CL:0002617;5.29e-12;2!CL:0002580;3.80e-08;3!CL:0000511;8.90e-07;1!CL:0002625;8.90e-07;1!CL:0000216;8.90e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.49e-33,15;CL:0002615,5.26e-17,3;CL:0002521,2.70e-16,3;CL:0002579,6.20e-16,3;CL:0002334,4.85e-15,12;CL:0002617,5.16e-12,2;CL:0002580,3.95e-08,3;CL:0000511,8.67e-07,1;CL:0002625,8.67e-07,1;CL:0000216,8.67e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!1.36e-08!12;UBERON:0000042!1.36e-08!12;UBERON:0003688!1.87e-08!6;UBERON:0002358!1.87e-08!6;UBERON:0003684!1.87e-08!6;UBERON:0001178!1.87e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.08e-31;6!UBERON:0002358;2.08e-31;6!UBERON:0003684;2.08e-31;6!UBERON:0001178;2.08e-31;6!UBERON:0004457;8.06e-28;9!UBERON:0000042;8.06e-28;9!UBERON:0002190;3.32e-16;3!UBERON:0001013;1.03e-12;14!UBERON:0005406;2.47e-11;2!UBERON:0002072;6.34e-10;5!UBERON:0000310;7.06e-09;10!UBERON:0001443;4.49e-08;11!UBERON:0001136;8.90e-07;1!UBERON:0001389;8.90e-07;1!UBERON:0001343;8.90e-07;1!UBERON:0000026;8.90e-07;1!UBERON:0008784;8.90e-07;1!UBERON:0006058;8.90e-07;1!UBERON:0003663;8.90e-07;1!UBERON:0004256;8.90e-07;1!UBERON:0004708;8.90e-07;1!UBERON:0002101;8.90e-07;1!UBERON:0004709;8.90e-07;1!UBERON:0002529;8.90e-07;1!UBERON:0010538;8.90e-07;1!UBERON:0003661;8.90e-07;1!UBERON:0010890;8.90e-07;1!UBERON:0002471;8.90e-07;1!UBERON:0001383;8.90e-07;1!UBERON:0004910;8.90e-07;1!UBERON:0010758;8.90e-07;1!UBERON:0010707;8.90e-07;1!UBERON:0004813;8.90e-07;1!UBERON:0000978;8.90e-07;1!UBERON:0002103;8.90e-07;1!UBERON:0001665;8.90e-07;1!UBERON:0003823;8.90e-07;1!UBERON:0000154;8.90e-07;1!UBERON:0010709;8.90e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.82e-31,6;UBERON:0002358,3.82e-31,6;UBERON:0003684,3.82e-31,6;UBERON:0001178,3.82e-31,6;UBERON:0004457,1.46e-20,12;UBERON:0000042,1.46e-20,12;UBERON:0002190,2.70e-16,3;UBERON:0001013,9.15e-13,14;UBERON:0005406,2.06e-11,2;UBERON:0002072,5.61e-10,5;UBERON:0000310,7.14e-09,10;UBERON:0004458,8.41e-09,49;UBERON:0001443,4.54e-08,11;UBERON:0003886,7.44e-08,54;UBERON:0002323,1.11e-07,46;UBERON:0004923,2.25e-07,66;UBERON:0001136,8.67e-07,1;UBERON:0001343,8.67e-07,1;UBERON:0004910,8.67e-07,1;UBERON:0005154,8.67e-07,1;UBERON:0005295,8.67e-07,1;UBERON:0004813,8.67e-07,1;UBERON:0005297,8.67e-07,1;UBERON:0005294,8.67e-07,1;UBERON:0010141,8.67e-07,1;UBERON:0005891,8.67e-07,1;UBERON:0005418,9.15e-07,1;UBERON:0001389,9.15e-07,1;UBERON:0000026,9.15e-07,1;UBERON:0008784,9.15e-07,1;UBERON:0006058,9.15e-07,1;UBERON:0003663,9.15e-07,1;UBERON:0004256,9.15e-07,1;UBERON:0004708,9.15e-07,1;UBERON:0002101,9.15e-07,1;UBERON:0004709,9.15e-07,1;UBERON:0002529,9.15e-07,1;UBERON:0010538,9.15e-07,1;UBERON:0003661,9.15e-07,1;UBERON:0010890,9.15e-07,1;UBERON:0002471,9.15e-07,1;UBERON:0001383,9.15e-07,1;UBERON:0004357,9.15e-07,1;UBERON:0004347,9.15e-07,1;UBERON:0005420,9.15e-07,1;UBERON:0005732,9.15e-07,1;UBERON:0010758,9.15e-07,1;UBERON:0010707,9.15e-07,1;UBERON:0000978,9.15e-07,1;UBERON:0002103,9.15e-07,1;UBERON:0001665,9.15e-07,1;UBERON:0003823,9.15e-07,1;UBERON:0000154,9.15e-07,1;UBERON:0010709,9.15e-07,1;UBERON:0005733,9.15e-07,1;UBERON:0005730,9.15e-07,1;UBERON:0002553,9.42e-07,61 | |||
|phase1_expression=5.26867299884614,4.92431204949261,3.52386010239928,4.00293193412522,5.36353313312745,3.48935409640147,7.59899634504932,1.89515962028049,1.30592814099919,0,0.697801167972428,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.869079113764942,1.5905718941022,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,0.633152558322899,0.132409180813219,0.573673241497627,0,0,0,0.49333509683432,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.600952235626387,0,0,0.640672166455702,0.423863802319124,0,0.412210116953756,0,0.744467425326359,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0.439001141634502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0.258543431515556,0,0,0.531876233169741,2.08014873822732,0.257207374262142,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0.579125226670317,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0.356857977594324,0.315404830067869,0.117141414992713,0.601892199455438,29.562975527278,2.0694614258501,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0,2.23297027036899,0.306923946576125,5.05188169979532,3.45975702990393,2.04682899626681,1.12597744800525,1.48418066444991,0,0.532685175939381,0,0,0,0.483437798366489,0.40101294060657,0.184161977871793,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,4.82051789532479,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0.571890581771475,0,0,0,0,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,1.15755106853338,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0.491245205065606,0,0,0.211107635297664,1.64647446479951,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0.251932747854276,0,0,0.311039587661807,0,0,0,1.28236427328014,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,1.30815439456455,0.341826167541004,0,0.269272933229316,0,0.31900115973192,0.824378340616761,0,0,0,0,0,0,0,0,0,0.632994193584081,0.326465616318295,0,0,0,0.530745387020035,0,0.296521128680622,0.370691816839509,0,0,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,2.27144668714639,0,0,0,0,0.387956065953678,0.0882561266915003,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0.458320848023367,0.717873024576814,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0.412618309791701,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,1.81538601365081,0.157204305099666,0.414239055347196,0,0,0,0,0.544017803369474,1.2534494701135,0.306345576763462,0.327872630709804,0,0,0,0,0,0.110929051536852,0,0,0,0,0.856396000634902,0,0,0,0.149254802886874,0.701139929541673,0,0.189403005275089,0,0,0.228840068396924,0.302461847526478,0.310874401165561,0.147855149989634,0,0,0.155262956876259,0,0,0.521745061811734,0,1.14241563650639,0,0,0,0,1.99047944349308,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0,0,1.42769420259154,0,0,0,0,0.381382095467167,0,0,0.376051641746286,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.354809480650555,0,0.514464028312255,0,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0,4.53200186031526,5.33846595652485,3.4794432940146,0.971421986118279,0,0,0,0,0.219881033490858,0.150962843566674,0.154348316215889,0,0,0.490296643507811,0,0.196308467114945,0,0.4226557275834,0.169927114687817,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0.606229585745915,0,0.829169439458779,0,5.75731751132648,0,0,0.0620747142958579,0,0,0.202117188958219,0.870866991587845,0.342233301085281,0,0.071722205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| |||
|short_description=p@chr3:8590309..8590333,+ | |||
}} |
Revision as of 01:29, 13 September 2013
Short description: | p@chr3:8590309..8590333, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:8590309..8590333, + |
Coexpression cluster: | C315_Osteoblast_Preadipocyte_mesenchymal_Smooth_Cardiac_leiomyoma_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.49e-33 | 15 |
adipocyte of omentum tissue | 5.26e-17 | 3 |
subcutaneous fat cell | 2.70e-16 | 3 |
omentum preadipocyte | 6.20e-16 | 3 |
preadipocyte | 4.85e-15 | 12 |
adipocyte of breast | 5.16e-12 | 2 |
preadipocyte of the breast | 3.95e-08 | 3 |
androgen binding protein secreting cell | 8.67e-07 | 1 |
seminiferous tubule epithelial cell | 8.67e-07 | 1 |
Sertoli cell | 8.67e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.