FFCP PHASE1:Hg19::chr4:4291780..4291807,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55646|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26021|TSSclassifier=S|UniProt=D6RDJ1|association_with_transcript=-15bp_to_ENST00000513174_5end|coexpression_cluster_id=C1|description=CAGE_peak_4_at_LYAR_5end|id=chr4:4291780..4291807,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002591;5.16e-21;1|ontology_enrichment_celltype_v019_2=CL:0002591,5.16e-21,1|ontology_enrichment_development_v019=UBERON:0009117;1.13e-18;10!UBERON:0005564;1.13e-18;10|ontology_enrichment_disease=DOID:162!4.32e-20!235;DOID:14566!1.73e-19!239;DOID:2531!5.73e-17!51;DOID:0060083!5.73e-17!51;DOID:1240!3.41e-13!39;DOID:0050686!3.39e-10!137;DOID:8692!1.75e-08!31;DOID:305!3.67e-07!106;DOID:0050687!8.97e-07!143;DOID:0060058!9.94e-07!10|ontology_enrichment_disease_v019=DOID:4231;3.34e-11;2!DOID:1907;3.34e-11;2|ontology_enrichment_disease_v019_2=DOID:4231,3.02e-11,2;DOID:1907,3.02e-11,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000473;3.80e-23;8!UBERON:0003135;4.84e-17;11!UBERON:0000078;3.34e-11;2!UBERON:0002012;3.34e-11;2!UBERON:0008886;3.34e-11;2!UBERON:0000991;3.08e-09;21!UBERON:0003101;7.61e-09;22!UBERON:0000079;7.61e-09;22|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.76e-23,8;UBERON:0003135,5.70e-17,11;UBERON:0000078,3.35e-11,2;UBERON:0007497,3.35e-11,2;UBERON:0003643,3.35e-11,2;UBERON:0003504,3.35e-11,2;UBERON:0003469,3.35e-11,2;UBERON:0003496,3.35e-11,2;UBERON:0002012,3.35e-11,2;UBERON:0008886,3.35e-11,2;UBERON:0007303,3.35e-11,2;UBERON:0002061,3.35e-11,2;UBERON:0005432,3.35e-11,2;UBERON:0004363,3.35e-11,2;UBERON:0000991,3.35e-09,21;UBERON:0009196,3.35e-09,21;UBERON:0009117,3.35e-09,21;UBERON:0005564,3.35e-09,21;UBERON:0004176,8.25e-09,22;UBERON:0003101,8.25e-09,22;UBERON:0000079,8.25e-09,22;UBERON:0004145,6.78e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0.164201178899891,0.393553906568396,0,0,0.154816123316076,0,0,0.369754010166788,1.47187681102573,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.580418477257168,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.526768169550154,0.196709770113833,0,0,0.167186495390678,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0.651083453856419,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,5.63210024640164,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302256294682921,0,0,0.545492241181669,0,0.609868530647977,0.265059536642971,0.464775771478074,0.10366105501537,0.252320850875628,0.72995471815166,0,0,0,0,0,0.236613600079688,0.505754070234305,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0.882926198829301,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.358234090811393,0.871901815541886,0,0.492663237895943,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0.519254429183621,0,0.241718899183244,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0,0,0.183138929636687,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0.107420244868274,0,0.170453254832202,0,0.165284915360978,0.192190067365106,0,0,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0.213648142254946,0,0,0.929015875628594,0.865615277858669,0.569134746787313,0.956557636372934,0.798317485731266,0.383010740264733,0.423347165447766,0,0.280797178113459,0,1.72347885350326,0,0.169291777801603,0.642352300414798,0.80719882876419,0.851692475380653,0,0,0.223676107892416,0.333698283423817,0,0.278406173895242,0,0.270455678475983,0,0,0.37428108081644,0,0,0.222886768554957,0,0,0,0,0,0,0,0.16480387422676,0.211125408127993,0,0,0.251932747854276,0,0.246169610922139,0,0,0.358042349351218,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0.108647371922008,0,0,0,1.02193298195737,0.156980256395025,0.16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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55646 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26021 | |||
|TSSclassifier=S | |||
|UniProt=D6RDJ1 | |||
|association_with_transcript=-15bp_to_ENST00000513174_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_LYAR_5end | |||
|id=chr4:4291780..4291807,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;5.16e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,5.16e-21,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.13e-18;10!UBERON:0005564;1.13e-18;10 | |||
|ontology_enrichment_disease=DOID:162!4.32e-20!235;DOID:14566!1.73e-19!239;DOID:2531!5.73e-17!51;DOID:0060083!5.73e-17!51;DOID:1240!3.41e-13!39;DOID:0050686!3.39e-10!137;DOID:8692!1.75e-08!31;DOID:305!3.67e-07!106;DOID:0050687!8.97e-07!143;DOID:0060058!9.94e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:4231;3.34e-11;2!DOID:1907;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,3.02e-11,2;DOID:1907,3.02e-11,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.80e-23;8!UBERON:0003135;4.84e-17;11!UBERON:0000078;3.34e-11;2!UBERON:0002012;3.34e-11;2!UBERON:0008886;3.34e-11;2!UBERON:0000991;3.08e-09;21!UBERON:0003101;7.61e-09;22!UBERON:0000079;7.61e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.76e-23,8;UBERON:0003135,5.70e-17,11;UBERON:0000078,3.35e-11,2;UBERON:0007497,3.35e-11,2;UBERON:0003643,3.35e-11,2;UBERON:0003504,3.35e-11,2;UBERON:0003469,3.35e-11,2;UBERON:0003496,3.35e-11,2;UBERON:0002012,3.35e-11,2;UBERON:0008886,3.35e-11,2;UBERON:0007303,3.35e-11,2;UBERON:0002061,3.35e-11,2;UBERON:0005432,3.35e-11,2;UBERON:0004363,3.35e-11,2;UBERON:0000991,3.35e-09,21;UBERON:0009196,3.35e-09,21;UBERON:0009117,3.35e-09,21;UBERON:0005564,3.35e-09,21;UBERON:0004176,8.25e-09,22;UBERON:0003101,8.25e-09,22;UBERON:0000079,8.25e-09,22;UBERON:0004145,6.78e-08,3 | |||
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| |||
|short_description=p4@LYAR | |||
}} |
Revision as of 10:58, 13 September 2013
Short description: | p4@LYAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_LYAR_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -15bp_to_ENST00000513174_5end |
EntrezGene: | LYAR |
HGNC: | 26021 |
UniProt: | D6RDJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 5.16e-21 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 4.76e-23 | 8 |
male reproductive organ | 5.70e-17 | 11 |
mixed ectoderm/mesoderm/endoderm-derived structure | 3.35e-11 | 2 |
developing epithelial placode | 3.35e-11 | 2 |
respiratory system arterial blood vessel | 3.35e-11 | 2 |
respiratory system blood vessel | 3.35e-11 | 2 |
respiratory system artery | 3.35e-11 | 2 |
head blood vessel | 3.35e-11 | 2 |
pulmonary artery | 3.35e-11 | 2 |
pulmonary vascular system | 3.35e-11 | 2 |
pharyngeal vasculature | 3.35e-11 | 2 |
truncus arteriosus | 3.35e-11 | 2 |
aortic sac | 3.35e-11 | 2 |
pharyngeal arch artery | 3.35e-11 | 2 |
gonad | 3.35e-09 | 21 |
indifferent external genitalia | 3.35e-09 | 21 |
indifferent gonad | 3.35e-09 | 21 |
gonad primordium | 3.35e-09 | 21 |
external genitalia | 8.25e-09 | 22 |
male organism | 8.25e-09 | 22 |
male reproductive system | 8.25e-09 | 22 |
outflow tract | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 3.02e-11 | 2 |
malignant fibroxanthoma | 3.02e-11 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.