FFCP PHASE1:Hg19::chr4:89680310..89680324,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10144|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19367|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000515155_5end|coexpression_cluster_id=C3|description=CAGE_peak_15_at_FAM13A_5end|id=chr4:89680310..89680324,-|ontology_enrichment_celltype=CL:0000540!8.41e-14!6;CL:0000031!8.41e-14!6;CL:0000404!8.41e-14!6;CL:0000047!1.06e-13!8|ontology_enrichment_celltype_v019=CL:0000540;5.39e-15;6!CL:0000404;5.39e-15;6|ontology_enrichment_celltype_v019_2=CL:0000047,4.62e-17,8;CL:0000540,4.68e-15,6;CL:0000031,4.68e-15,6;CL:0000404,4.68e-15,6|ontology_enrichment_development_v019=UBERON:0006215;3.98e-17;3!CL:0000031;5.39e-15;6!UBERON:0006601;6.38e-10;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!5.40e-73!86;UBERON:0001017!2.39e-71!82;UBERON:0001049!2.43e-67!57;UBERON:0005068!2.43e-67!57;UBERON:0006241!2.43e-67!57;UBERON:0007135!2.43e-67!57;UBERON:0000073!4.98e-67!94;UBERON:0001016!4.98e-67!94;UBERON:0002616!1.14e-58!59;UBERON:0002780!2.05e-57!41;UBERON:0001890!2.05e-57!41;UBERON:0006240!2.05e-57!41;UBERON:0000955!5.38e-56!69;UBERON:0006238!5.38e-56!69;UBERON:0003080!8.06e-56!42;UBERON:0007023!8.58e-54!115;UBERON:0001869!7.97e-52!32;UBERON:0001893!8.67e-52!34;UBERON:0002020!4.55e-51!34;UBERON:0003528!4.55e-51!34;UBERON:0002791!1.39e-49!33;UBERON:0003075!5.99e-47!86;UBERON:0007284!5.99e-47!86;UBERON:0002346!2.97e-44!90;UBERON:0002619!5.80e-41!22;UBERON:0003056!3.73e-40!61;UBERON:0000956!8.46e-39!25;UBERON:0000203!8.46e-39!25;UBERON:0001950!5.88e-37!20;UBERON:0004121!7.35e-36!169;UBERON:0000924!1.19e-34!173;UBERON:0006601!1.19e-34!173;UBERON:0000153!2.77e-34!129;UBERON:0007811!2.77e-34!129;UBERON:0000033!1.80e-33!123;UBERON:0000025!1.64e-17!194;UBERON:0000200!8.34e-15!6;UBERON:0002420!3.33e-14!9;UBERON:0007245!3.33e-14!9;UBERON:0010009!3.33e-14!9;UBERON:0010011!3.33e-14!9;UBERON:0000454!3.33e-14!9;UBERON:0001871!5.59e-14!7;UBERON:0004111!1.55e-13!241;UBERON:0002308!1.77e-13!9;UBERON:0000125!1.77e-13!9;UBERON:0003076!1.11e-12!15;UBERON:0003057!1.11e-12!15;UBERON:0002021!1.42e-11!5;UBERON:0000349!1.46e-11!5;UBERON:0000477!2.85e-11!286;UBERON:0004733!1.17e-10!12;UBERON:0002028!1.17e-10!12;UBERON:0007277!1.17e-10!12;UBERON:0000483!1.35e-10!309;UBERON:0000475!1.60e-10!365;UBERON:0009663!2.20e-10!7;UBERON:0000119!2.36e-10!312;UBERON:0004732!1.01e-09!13;UBERON:0000369!6.80e-09!4;UBERON:0002435!6.80e-09!4;UBERON:0000204!6.80e-09!4;UBERON:0010082!6.80e-09!4;UBERON:0002680!1.94e-08!9;UBERON:0001895!1.94e-08!9;UBERON:0010092!1.94e-08!9;UBERON:0002771!3.27e-08!3;UBERON:0001872!3.46e-08!5;UBERON:0000064!2.54e-07!219;UBERON:0001894!2.64e-07!7;UBERON:0006222!2.64e-07!7;UBERON:0005383!6.66e-07!3;UBERON:0005382!6.66e-07!3;UBERON:0000481!7.37e-07!347|ontology_enrichment_uberon_v019=UBERON:0002619;3.50e-57;22!UBERON:0001950;2.66e-55;20!UBERON:0000956;3.46e-50;25!UBERON:0000203;3.46e-50;25!UBERON:0001869;1.38e-42;32!UBERON:0001893;5.59e-41;34!UBERON:0002791;3.24e-38;32!UBERON:0003528;3.89e-37;34!UBERON:0002020;3.89e-37;34!UBERON:0000200;7.38e-33;6!UBERON:0002780;5.25e-29;41!UBERON:0001890;5.25e-29;41!UBERON:0000073;3.26e-28;53!UBERON:0002616;3.26e-28;53!UBERON:0000955;4.31e-22;68!UBERON:0001017;2.06e-18;75!UBERON:0001870;9.12e-18;3!UBERON:0001872;1.73e-17;5!UBERON:0001016;3.22e-16;83!UBERON:0001871;1.53e-12;6!UBERON:0002702;1.75e-12;2!UBERON:0002771;5.82e-12;2!UBERON:0002021;2.42e-10;5!UBERON:0000349;3.92e-10;5!UBERON:0002680;6.97e-10;9!UBERON:0001895;6.97e-10;9!UBERON:0007023;3.89e-09;114!UBERON:0002037;8.23e-09;6!UBERON:0011216;3.47e-08;132!UBERON:0004733;1.97e-07;12!UBERON:0002028;1.97e-07;12!UBERON:0002022;3.72e-07;1!UBERON:0002902;5.40e-07;1!UBERON:0009899;5.40e-07;1!UBERON:0007190;5.40e-07;1!UBERON:0004732;7.26e-07;13|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.23e-57,22;UBERON:0001017,3.42e-57,81;UBERON:0001950,9.24e-56,20;UBERON:0001016,5.23e-51,89;UBERON:0000956,1.37e-50,25;UBERON:0000203,1.37e-50,25;UBERON:0001869,7.91e-50,32;UBERON:0000073,2.85e-48,53;UBERON:0002616,2.85e-48,53;UBERON:0000955,3.25e-47,68;UBERON:0006238,3.25e-47,68;UBERON:0001893,9.36e-47,34;UBERON:0001049,1.81e-45,56;UBERON:0005068,1.81e-45,56;UBERON:0006241,1.81e-45,56;UBERON:0007135,1.81e-45,56;UBERON:0002791,3.67e-44,32;UBERON:0002780,1.06e-42,41;UBERON:0001890,1.06e-42,41;UBERON:0003080,1.06e-42,41;UBERON:0006240,1.06e-42,41;UBERON:0003528,2.00e-41,34;UBERON:0002020,2.00e-41,34;UBERON:0000200,3.34e-33,6;UBERON:0003075,1.37e-32,82;UBERON:0007284,1.37e-32,82;UBERON:0002346,7.45e-31,86;UBERON:0003056,8.31e-31,61;UBERON:0007023,7.81e-27,114;UBERON:0004121,5.39e-26,171;UBERON:0000924,5.39e-26,171;UBERON:0006601,5.39e-26,171;UBERON:0010371,1.12e-24,104;UBERON:0010314,3.17e-22,132;UBERON:0011216,1.72e-21,223;UBERON:0001872,6.41e-18,5;UBERON:0001870,1.15e-17,3;UBERON:0001871,1.10e-12,6;UBERON:0002702,2.14e-12,2;UBERON:0002771,3.17e-12,2;UBERON:0000025,4.80e-11,192;UBERON:0002021,2.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10144 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19367 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000515155_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_15_at_FAM13A_5end | |||
|id=chr4:89680310..89680324,- | |||
|ontology_enrichment_celltype=CL:0000540!8.41e-14!6;CL:0000031!8.41e-14!6;CL:0000404!8.41e-14!6;CL:0000047!1.06e-13!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;5.39e-15;6!CL:0000404;5.39e-15;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.62e-17,8;CL:0000540,4.68e-15,6;CL:0000031,4.68e-15,6;CL:0000404,4.68e-15,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.98e-17;3!CL:0000031;5.39e-15;6!UBERON:0006601;6.38e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p15@FAM13A | |||
}} |
Revision as of 12:17, 13 September 2013
Short description: | p15@FAM13A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_FAM13A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000515155_5end |
EntrezGene: | FAM13A |
HGNC: | 19367 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.62e-17 | 8 |
neuron | 4.68e-15 | 6 |
neuroblast | 4.68e-15 | 6 |
electrically signaling cell | 4.68e-15 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.