FFCP PHASE1:Hg19::chr4:90757261..90757273,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6622|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11138|TSSclassifier=S|UniProt=E7EPV7|association_with_transcript=-415bp_to_ENST00000502987_5end|coexpression_cluster_id=C14|description=CAGE_peak_11_at_SNCA_5end|id=chr4:90757261..90757273,-|ontology_enrichment_celltype=CL:0000764!5.93e-10!2;CL:0000765!5.93e-10!2;CL:0000050!5.93e-10!2;CL:0000038!5.93e-10!2;CL:0000558!5.93e-10!2;CL:0000547!5.93e-10!2;CL:0000549!5.93e-10!2;CL:0000550!5.93e-10!2;CL:0000552!5.93e-10!2|ontology_enrichment_celltype_v019=CL:0000764;1.86e-36;2!CL:0000558;1.86e-36;2|ontology_enrichment_celltype_v019_2=CL:0000764,1.70e-36,2;CL:0000765,1.70e-36,2;CL:0000050,1.70e-36,2;CL:0000038,1.70e-36,2;CL:0000558,1.70e-36,2;CL:0000547,1.70e-36,2;CL:0000549,1.70e-36,2;CL:0000550,1.70e-36,2;CL:0000552,1.70e-36,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1909!1.09e-09!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.42e-23!115;UBERON:0000178!4.34e-18!15;UBERON:0000179!4.34e-18!15;UBERON:0000463!4.34e-18!15;UBERON:0002360!6.29e-09!2;UBERON:0000094!6.29e-09!2;UBERON:0007645!6.29e-09!2;UBERON:0001950!1.80e-08!20;UBERON:0002619!1.18e-07!22;UBERON:0001017!2.02e-07!82;UBERON:0000073!5.56e-07!94;UBERON:0001016!5.56e-07!94;UBERON:0005743!6.02e-07!86|ontology_enrichment_uberon_v019=UBERON:0000178;2.74e-76;15!UBERON:0000179;2.74e-76;15!UBERON:0000463;2.74e-76;15!UBERON:0002390;1.15e-33;32!UBERON:0002193;2.44e-19;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.74e-76,15;UBERON:0000179,2.74e-76,15;UBERON:0000463,2.74e-76,15;UBERON:0007023,3.13e-15,114;UBERON:0002390,2.86e-11,98;UBERON:0003061,2.86e-11,98;UBERON:0004535,3.44e-10,109;UBERON:0002193,3.44e-10,108;UBERON:0001009,6.67e-10,112|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06963827304308,1.5686127061494,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1489521846434,13.7634697285628,5.12682468456746,2.85878130549347,2.46817363851717,5.83625980073446,12.9607544937148,9.51750211553125,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,1.4889757501569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.303298235083296,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p11@SNCA}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6622 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11138 | |||
|TSSclassifier=S | |||
|UniProt=E7EPV7 | |||
|association_with_transcript=-415bp_to_ENST00000502987_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_11_at_SNCA_5end | |||
|id=chr4:90757261..90757273,- | |||
|ontology_enrichment_celltype=CL:0000764!5.93e-10!2;CL:0000765!5.93e-10!2;CL:0000050!5.93e-10!2;CL:0000038!5.93e-10!2;CL:0000558!5.93e-10!2;CL:0000547!5.93e-10!2;CL:0000549!5.93e-10!2;CL:0000550!5.93e-10!2;CL:0000552!5.93e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.86e-36;2!CL:0000558;1.86e-36;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.70e-36,2;CL:0000765,1.70e-36,2;CL:0000050,1.70e-36,2;CL:0000038,1.70e-36,2;CL:0000558,1.70e-36,2;CL:0000547,1.70e-36,2;CL:0000549,1.70e-36,2;CL:0000550,1.70e-36,2;CL:0000552,1.70e-36,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!1.09e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-23!115;UBERON:0000178!4.34e-18!15;UBERON:0000179!4.34e-18!15;UBERON:0000463!4.34e-18!15;UBERON:0002360!6.29e-09!2;UBERON:0000094!6.29e-09!2;UBERON:0007645!6.29e-09!2;UBERON:0001950!1.80e-08!20;UBERON:0002619!1.18e-07!22;UBERON:0001017!2.02e-07!82;UBERON:0000073!5.56e-07!94;UBERON:0001016!5.56e-07!94;UBERON:0005743!6.02e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.74e-76;15!UBERON:0000179;2.74e-76;15!UBERON:0000463;2.74e-76;15!UBERON:0002390;1.15e-33;32!UBERON:0002193;2.44e-19;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.74e-76,15;UBERON:0000179,2.74e-76,15;UBERON:0000463,2.74e-76,15;UBERON:0007023,3.13e-15,114;UBERON:0002390,2.86e-11,98;UBERON:0003061,2.86e-11,98;UBERON:0004535,3.44e-10,109;UBERON:0002193,3.44e-10,108;UBERON:0001009,6.67e-10,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06963827304308,1.5686127061494,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1489521846434,13.7634697285628,5.12682468456746,2.85878130549347,2.46817363851717,5.83625980073446,12.9607544937148,9.51750211553125,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,1.4889757501569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.303298235083296,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@SNCA | |||
}} |
Revision as of 12:19, 13 September 2013
Short description: | p11@SNCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_SNCA_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -415bp_to_ENST00000502987_5end |
EntrezGene: | SNCA |
HGNC: | 11138 |
UniProt: | E7EPV7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.70e-36 | 2 |
erythroblast | 1.70e-36 | 2 |
megakaryocyte-erythroid progenitor cell | 1.70e-36 | 2 |
erythroid progenitor cell | 1.70e-36 | 2 |
reticulocyte | 1.70e-36 | 2 |
proerythroblast | 1.70e-36 | 2 |
basophilic erythroblast | 1.70e-36 | 2 |
polychromatophilic erythroblast | 1.70e-36 | 2 |
orthochromatic erythroblast | 1.70e-36 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.74e-76 | 15 |
haemolymphatic fluid | 2.74e-76 | 15 |
organism substance | 2.74e-76 | 15 |
adult organism | 3.13e-15 | 114 |
hematopoietic system | 2.86e-11 | 98 |
blood island | 2.86e-11 | 98 |
cardiovascular system | 3.44e-10 | 109 |
hemolymphoid system | 3.44e-10 | 108 |
circulatory system | 6.67e-10 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.