FFCP PHASE1:Mm9::chr16:72563753..72563785,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=141|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:72563753..72563785,+|id=chr16:72563753..72563785,+|ontology_enrichment_celltype=CL:0000117!5.51e-30!23;CL:0000337!5.51e-30!23;CL:0000540!3.76e-19!33;CL:0000047!3.76e-19!33;CL:0000031!3.76e-19!33;CL:0000404!3.76e-19!33;CL:0000393!2.44e-15!39;CL:0000211!2.44e-15!39;CL:0002319!2.13e-13!43;CL:0000221!5.72e-13!44;CL:0000133!5.72e-13!44;CL:0000055!9.15e-11!50;CL:0002613!2.31e-07!3;CL:0002612!6.17e-07!3;CL:0002610!9.13e-07!3|ontology_enrichment_celltype_v019_2=CL:0002613,1.16e-30,3;CL:0000117,1.16e-20,23;CL:0000337,1.16e-20,23;CL:0000540,2.22e-14,33;CL:0000047,2.22e-14,33;CL:0000031,2.22e-14,33;CL:0000404,2.22e-14,33;CL:0000393,3.79e-12,39;CL:0000211,3.79e-12,39;CL:0002319,5.29e-11,43;CL:0000221,9.50e-11,44;CL:0000133,9.50e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002420!1.74e-15!8;UBERON:0007245!1.74e-15!8;UBERON:0010009!1.74e-15!8;UBERON:0010011!1.74e-15!8;UBERON:0000454!1.74e-15!8;UBERON:0001017!2.09e-13!73;UBERON:0005743!2.09e-13!73;UBERON:0001049!2.92e-13!52;UBERON:0005068!2.92e-13!52;UBERON:0006241!2.92e-13!52;UBERON:0007135!2.92e-13!52;UBERON:0000073!7.51e-13!75;UBERON:0001016!7.51e-13!75;UBERON:0002020!2.13e-12!34;UBERON:0002616!2.15e-11!49;UBERON:0000955!4.66e-11!50;UBERON:0006238!4.66e-11!50;UBERON:0002346!5.33e-11!71;UBERON:0003075!5.33e-11!71;UBERON:0007284!5.33e-11!71;UBERON:0000033!1.28e-10!63;UBERON:0000369!2.23e-10!5;UBERON:0002435!2.23e-10!5;UBERON:0000204!2.23e-10!5;UBERON:0010082!2.23e-10!5;UBERON:0001948!2.43e-10!5;UBERON:0002315!2.43e-10!5;UBERON:0004121!5.95e-10!102;UBERON:0000924!5.95e-10!102;UBERON:0006601!5.95e-10!102;UBERON:0003056!8.90e-10!49;UBERON:0003080!3.74e-09!40;UBERON:0002240!1.62e-08!6;UBERON:0005174!1.62e-08!6;UBERON:0001137!1.62e-08!6;UBERON:0002780!2.53e-08!39;UBERON:0001890!2.53e-08!39;UBERON:0006240!2.53e-08!39;UBERON:0002950!6.23e-08!4;UBERON:0001891!6.23e-08!4;UBERON:0009616!6.23e-08!4;UBERON:0002298!1.80e-07!6;UBERON:0002257!6.17e-07!3;UBERON:0002791!8.80e-07!29;UBERON:0003528!8.80e-07!29;UBERON:0001893!8.80e-07!29;UBERON:0004684!9.13e-07!3;UBERON:0002275!9.13e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0002420,2.68e-20,8;UBERON:0007245,2.68e-20,8;UBERON:0010009,2.68e-20,8;UBERON:0010011,2.68e-20,8;UBERON:0000454,2.68e-20,8;UBERON:0000369,1.02e-18,5;UBERON:0002435,1.02e-18,5;UBERON:0000204,1.02e-18,5;UBERON:0010082,1.02e-18,5;UBERON:0002020,1.98e-07,34|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.420649922702764,0.571301968807607,0.662605622854841,0.122490799214954,0,0,1.10115880999389,0.766124028511126,0.46081959976873,8.70449499019279,7.13603620098795,4.16730696445408,0.558365998002762,1.12552522006336,0.45839474333043,0.883885756421003,0.711858403995515,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0.376963056338593,0,0,0.20778804455956,0.486723789203273,0,0,0,0,0,0.459804208866946,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,1.99512436700516,1.02440163452481,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.354951612318675,0,0,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0|short_description=p@chr16:72563753..72563785,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=141 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:72563753..72563785,+ | |||
|id=chr16:72563753..72563785,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.51e-30!23;CL:0000337!5.51e-30!23;CL:0000540!3.76e-19!33;CL:0000047!3.76e-19!33;CL:0000031!3.76e-19!33;CL:0000404!3.76e-19!33;CL:0000393!2.44e-15!39;CL:0000211!2.44e-15!39;CL:0002319!2.13e-13!43;CL:0000221!5.72e-13!44;CL:0000133!5.72e-13!44;CL:0000055!9.15e-11!50;CL:0002613!2.31e-07!3;CL:0002612!6.17e-07!3;CL:0002610!9.13e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.16e-30,3;CL:0000117,1.16e-20,23;CL:0000337,1.16e-20,23;CL:0000540,2.22e-14,33;CL:0000047,2.22e-14,33;CL:0000031,2.22e-14,33;CL:0000404,2.22e-14,33;CL:0000393,3.79e-12,39;CL:0000211,3.79e-12,39;CL:0002319,5.29e-11,43;CL:0000221,9.50e-11,44;CL:0000133,9.50e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002420!1.74e-15!8;UBERON:0007245!1.74e-15!8;UBERON:0010009!1.74e-15!8;UBERON:0010011!1.74e-15!8;UBERON:0000454!1.74e-15!8;UBERON:0001017!2.09e-13!73;UBERON:0005743!2.09e-13!73;UBERON:0001049!2.92e-13!52;UBERON:0005068!2.92e-13!52;UBERON:0006241!2.92e-13!52;UBERON:0007135!2.92e-13!52;UBERON:0000073!7.51e-13!75;UBERON:0001016!7.51e-13!75;UBERON:0002020!2.13e-12!34;UBERON:0002616!2.15e-11!49;UBERON:0000955!4.66e-11!50;UBERON:0006238!4.66e-11!50;UBERON:0002346!5.33e-11!71;UBERON:0003075!5.33e-11!71;UBERON:0007284!5.33e-11!71;UBERON:0000033!1.28e-10!63;UBERON:0000369!2.23e-10!5;UBERON:0002435!2.23e-10!5;UBERON:0000204!2.23e-10!5;UBERON:0010082!2.23e-10!5;UBERON:0001948!2.43e-10!5;UBERON:0002315!2.43e-10!5;UBERON:0004121!5.95e-10!102;UBERON:0000924!5.95e-10!102;UBERON:0006601!5.95e-10!102;UBERON:0003056!8.90e-10!49;UBERON:0003080!3.74e-09!40;UBERON:0002240!1.62e-08!6;UBERON:0005174!1.62e-08!6;UBERON:0001137!1.62e-08!6;UBERON:0002780!2.53e-08!39;UBERON:0001890!2.53e-08!39;UBERON:0006240!2.53e-08!39;UBERON:0002950!6.23e-08!4;UBERON:0001891!6.23e-08!4;UBERON:0009616!6.23e-08!4;UBERON:0002298!1.80e-07!6;UBERON:0002257!6.17e-07!3;UBERON:0002791!8.80e-07!29;UBERON:0003528!8.80e-07!29;UBERON:0001893!8.80e-07!29;UBERON:0004684!9.13e-07!3;UBERON:0002275!9.13e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,2.68e-20,8;UBERON:0007245,2.68e-20,8;UBERON:0010009,2.68e-20,8;UBERON:0010011,2.68e-20,8;UBERON:0000454,2.68e-20,8;UBERON:0000369,1.02e-18,5;UBERON:0002435,1.02e-18,5;UBERON:0000204,1.02e-18,5;UBERON:0010082,1.02e-18,5;UBERON:0002020,1.98e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.420649922702764,0.571301968807607,0.662605622854841,0.122490799214954,0,0,1.10115880999389,0.766124028511126,0.46081959976873,8.70449499019279,7.13603620098795,4.16730696445408,0.558365998002762,1.12552522006336,0.45839474333043,0.883885756421003,0.711858403995515,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0.376963056338593,0,0,0.20778804455956,0.486723789203273,0,0,0,0,0,0.459804208866946,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,1.99512436700516,1.02440163452481,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.354951612318675,0,0,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p@chr16:72563753..72563785,+ | |||
}} |
Revision as of 13:04, 13 September 2013
Short description: | p@chr16:72563753..72563785, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:72563753..72563785, + |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.16e-30 | 3 |
CNS neuron (sensu Vertebrata) | 1.16e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.16e-20 | 23 |
neuron | 2.22e-14 | 33 |
neuronal stem cell | 2.22e-14 | 33 |
neuroblast | 2.22e-14 | 33 |
electrically signaling cell | 2.22e-14 | 33 |
electrically responsive cell | 3.79e-12 | 39 |
electrically active cell | 3.79e-12 | 39 |
neural cell | 5.29e-11 | 43 |
ectodermal cell | 9.50e-11 | 44 |
neurectodermal cell | 9.50e-11 | 44 |
Ontology term | p-value | n |
---|---|---|
basal ganglion | 2.68e-20 | 8 |
nuclear complex of neuraxis | 2.68e-20 | 8 |
aggregate regional part of brain | 2.68e-20 | 8 |
collection of basal ganglia | 2.68e-20 | 8 |
cerebral subcortex | 2.68e-20 | 8 |
corpus striatum | 1.02e-18 | 5 |
striatum | 1.02e-18 | 5 |
ventral part of telencephalon | 1.02e-18 | 5 |
future corpus striatum | 1.02e-18 | 5 |
gray matter | 1.98e-07 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.