FFCP PHASE1:Mm9::chr18:20594513..20594544,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16769|HGNC=|MCL_coexpression_id=25|UniProt=Q7TMD7,F6WRN6,D3YYT2|association_with_transcript=-131bp_to_ENSMUST00000019426,ENSMUST00000097660,ENSMUST00000115843,NM_181564,uc008een.1_5end|description=CAGE_peak_2_at_Dsg4_5end|id=chr18:20594513..20594544,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!8.54e-38!5;UBERON:0001003!8.54e-38!5;UBERON:0002097!8.54e-38!5;UBERON:0002199!8.54e-38!5;UBERON:0007029!8.54e-38!5;UBERON:0007376!8.54e-38!5;UBERON:0002416!8.54e-38!5;UBERON:0007383!8.54e-38!5;UBERON:0003102!1.48e-15!23;UBERON:0001723!8.81e-09!1;UBERON:0001033!8.81e-09!1;UBERON:0010056!8.81e-09!1|ontology_enrichment_uberon_v019_2=UBERON:0000014,4.20e-56,5;UBERON:0001003,4.20e-56,5;UBERON:0002097,4.20e-56,5;UBERON:0002199,4.20e-56,5;UBERON:0007029,4.20e-56,5;UBERON:0007376,4.20e-56,5;UBERON:0002416,4.20e-56,5;UBERON:0007383,4.20e-56,5;UBERON:0003102,2.26e-20,22;UBERON:0001723,2.59e-18,1;UBERON:0001033,2.59e-18,1;UBERON:0010056,2.59e-18,1;UBERON:0000165,7.56e-10,2;UBERON:0000166,7.56e-10,2;UBERON:0000930,7.56e-10,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60613260001032,0.322928853391811,1.14594557363496,6.32673423216623,11.4898629821543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,1.13365191807606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0.661774257358546,0.231867835620421|short_description=p2@Dsg4}} | ||
|EntrezGene=16769 | |||
|HGNC= | |||
|MCL_coexpression_id=25 | |||
|UniProt=Q7TMD7,F6WRN6,D3YYT2 | |||
|association_with_transcript=-131bp_to_ENSMUST00000019426,ENSMUST00000097660,ENSMUST00000115843,NM_181564,uc008een.1_5end | |||
|description=CAGE_peak_2_at_Dsg4_5end | |||
|id=chr18:20594513..20594544,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!8.54e-38!5;UBERON:0001003!8.54e-38!5;UBERON:0002097!8.54e-38!5;UBERON:0002199!8.54e-38!5;UBERON:0007029!8.54e-38!5;UBERON:0007376!8.54e-38!5;UBERON:0002416!8.54e-38!5;UBERON:0007383!8.54e-38!5;UBERON:0003102!1.48e-15!23;UBERON:0001723!8.81e-09!1;UBERON:0001033!8.81e-09!1;UBERON:0010056!8.81e-09!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,4.20e-56,5;UBERON:0001003,4.20e-56,5;UBERON:0002097,4.20e-56,5;UBERON:0002199,4.20e-56,5;UBERON:0007029,4.20e-56,5;UBERON:0007376,4.20e-56,5;UBERON:0002416,4.20e-56,5;UBERON:0007383,4.20e-56,5;UBERON:0003102,2.26e-20,22;UBERON:0001723,2.59e-18,1;UBERON:0001033,2.59e-18,1;UBERON:0010056,2.59e-18,1;UBERON:0000165,7.56e-10,2;UBERON:0000166,7.56e-10,2;UBERON:0000930,7.56e-10,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60613260001032,0.322928853391811,1.14594557363496,6.32673423216623,11.4898629821543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,1.13365191807606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0.661774257358546,0.231867835620421 | |||
|short_description=p2@Dsg4 | |||
}} |
Revision as of 15:46, 13 September 2013
Short description: | p2@Dsg4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dsg4_5end |
Coexpression cluster: | MCL_coexpression_mm9:25 |
Association with transcript: | -131bp_to_ENSMUST00000019426, ENSMUST00000097660, ENSMUST00000115843, NM_181564, uc008een.1_5end |
EntrezGene: | Dsg4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 4.20e-56 | 5 |
skin epidermis | 4.20e-56 | 5 |
skin of body | 4.20e-56 | 5 |
integument | 4.20e-56 | 5 |
surface | 4.20e-56 | 5 |
outer epithelium | 4.20e-56 | 5 |
integumental system | 4.20e-56 | 5 |
enveloping layer of ectoderm | 4.20e-56 | 5 |
surface structure | 2.26e-20 | 22 |
tongue | 2.59e-18 | 1 |
gustatory system | 2.59e-18 | 1 |
future tongue | 2.59e-18 | 1 |
mouth | 7.56e-10 | 2 |
oral opening | 7.56e-10 | 2 |
stomodeum | 7.56e-10 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.