FFCP PHASE1:Hg19::chr5:74630416..74630424,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C793|description=CAGE_peak_at_chr5:74630416..74630424,+|id=chr5:74630416..74630424,+|ontology_enrichment_celltype=CL:0002150!3.70e-09!3;CL:0000861!3.70e-09!3;CL:0002253!4.70e-07!2|ontology_enrichment_celltype_v019=CL:0000307;1.03e-17;3!CL:0002202;8.61e-07;9!CL:0002632;8.61e-07;9|ontology_enrichment_celltype_v019_2=CL:0000068,1.12e-17,3;CL:0000069,1.12e-17,3;CL:0000307,1.12e-17,3;CL:0000377,1.12e-17,3;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9|ontology_enrichment_development_v019=CL:0000377;1.03e-17;3|ontology_enrichment_disease=DOID:162!3.82e-16!235;DOID:14566!1.45e-15!239;DOID:0050686!7.47e-11!137;DOID:0060058!3.79e-10!10;DOID:4362!3.75e-09!5;DOID:0050687!2.05e-08!143;DOID:2531!3.42e-08!51;DOID:0060083!3.42e-08!51;DOID:305!1.35e-07!106|ontology_enrichment_disease_v019=DOID:1036;1.59e-07;8!DOID:8692;3.64e-07;31|ontology_enrichment_disease_v019_2=DOID:1036,1.59e-07,8;DOID:8692,1.92e-07,31|ontology_enrichment_uberon=UBERON:0000002!1.25e-07!6;UBERON:0001560!1.25e-07!6|ontology_enrichment_uberon_v019=UBERON:0003126;2.26e-08;7!UBERON:0001005;2.26e-08;7|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.35e-08,7;UBERON:0001005,2.35e-08,7|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0,0,0.329250856225877,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,1.4098700508785,0.37428108081644,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,2.2251121057253,0,0,0.424059214301822,0.216388639742091,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,4.20905574360579,0.103688191397247,0,0,0,0,0,0,0,0,0.174118413160805,0,0.171986032471617,0.0967563312890851,0.219267951258557,0.328461828212837,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.787831823072237,0.906574442192831,0.539228350833479,0.0984274815147488,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444925607568277,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0.126698501011437,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0|short_description=p@chr5:74630416..74630424,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C793 | |||
|description=CAGE_peak_at_chr5:74630416..74630424,+ | |||
|id=chr5:74630416..74630424,+ | |||
|ontology_enrichment_celltype=CL:0002150!3.70e-09!3;CL:0000861!3.70e-09!3;CL:0002253!4.70e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000307;1.03e-17;3!CL:0002202;8.61e-07;9!CL:0002632;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.12e-17,3;CL:0000069,1.12e-17,3;CL:0000307,1.12e-17,3;CL:0000377,1.12e-17,3;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;1.03e-17;3 | |||
|ontology_enrichment_disease=DOID:162!3.82e-16!235;DOID:14566!1.45e-15!239;DOID:0050686!7.47e-11!137;DOID:0060058!3.79e-10!10;DOID:4362!3.75e-09!5;DOID:0050687!2.05e-08!143;DOID:2531!3.42e-08!51;DOID:0060083!3.42e-08!51;DOID:305!1.35e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.59e-07;8!DOID:8692;3.64e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.59e-07,8;DOID:8692,1.92e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0000002!1.25e-07!6;UBERON:0001560!1.25e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003126;2.26e-08;7!UBERON:0001005;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.35e-08,7;UBERON:0001005,2.35e-08,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0,0,0.329250856225877,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,1.4098700508785,0.37428108081644,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,2.2251121057253,0,0,0.424059214301822,0.216388639742091,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,4.20905574360579,0.103688191397247,0,0,0,0,0,0,0,0,0.174118413160805,0,0.171986032471617,0.0967563312890851,0.219267951258557,0.328461828212837,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.787831823072237,0.906574442192831,0.539228350833479,0.0984274815147488,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444925607568277,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0.126698501011437,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr5:74630416..74630424,+ | |||
}} |
Revision as of 16:25, 13 September 2013
Short description: | p@chr5:74630416..74630424, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:74630416..74630424, + |
Coexpression cluster: | C793_chronic_embryonic_spinal_medulla_pons_locus_corpus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.12e-17 | 3 |
branched duct epithelial cell | 1.12e-17 | 3 |
tracheal epithelial cell | 1.12e-17 | 3 |
tracheoblast | 1.12e-17 | 3 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.35e-08 | 7 |
respiratory airway | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.59e-07 | 8 |
myeloid leukemia | 1.92e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.