FFCP PHASE1:Mm9::chr18:74938857..74938878,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=52538|HGNC=|MCL_coexpression_id=201|UniProt=Q8BWT1|association_with_transcript=0bp_to_NM_177470,uc008fpt.1_5end|description=CAGE_peak_1_at_Acaa2_5end|id=chr18:74938857..74938878,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!7.72e-14!47;UBERON:0002107!1.31e-10!22;UBERON:0007499!1.31e-10!22;UBERON:0006925!1.31e-10!22;UBERON:0009497!1.31e-10!22;UBERON:0000015!1.31e-10!22;UBERON:0002423!1.31e-10!22;UBERON:0006235!1.31e-10!22;UBERON:0008835!1.31e-10!22;UBERON:0003894!1.31e-10!22;UBERON:0004161!1.31e-10!22;UBERON:0008836!1.31e-10!22;UBERON:0009854!1.34e-10!23;UBERON:0009856!1.34e-10!23;UBERON:0002365!2.38e-09!25;UBERON:0002330!2.38e-09!25;UBERON:0001007!2.40e-08!128;UBERON:0001555!2.40e-08!128;UBERON:0007026!2.40e-08!128;UBERON:0005172!3.65e-08!49;UBERON:0005173!3.65e-08!49;UBERON:0002417!3.65e-08!49;UBERON:0000916!3.65e-08!49;UBERON:0004921!5.78e-08!126;UBERON:0004185!5.78e-08!126;UBERON:0004119!1.17e-07!130;UBERON:0000925!1.17e-07!130;UBERON:0006595!1.17e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0003914,7.72e-14,47;UBERON:0002107,1.31e-10,22;UBERON:0007499,1.31e-10,22;UBERON:0006925,1.31e-10,22;UBERON:0009497,1.31e-10,22;UBERON:0000015,1.31e-10,22;UBERON:0002423,1.31e-10,22;UBERON:0006235,1.31e-10,22;UBERON:0008835,1.31e-10,22;UBERON:0003894,1.31e-10,22;UBERON:0004161,1.31e-10,22;UBERON:0008836,1.31e-10,22;UBERON:0009854,1.34e-10,23;UBERON:0009856,1.34e-10,23;UBERON:0002365,2.38e-09,25;UBERON:0002330,2.38e-09,25;UBERON:0001007,1.77e-08,116;UBERON:0001555,1.77e-08,116;UBERON:0007026,1.77e-08,116;UBERON:0005172,3.65e-08,49;UBERON:0005173,3.65e-08,49;UBERON:0002417,3.65e-08,49;UBERON:0000916,3.65e-08,49;UBERON:0004921,4.27e-08,114;UBERON:0004119,9.38e-08,118;UBERON:0000925,9.38e-08,118;UBERON:0006595,9.38e-08,118;UBERON:0003104,1.73e-07,61;UBERON:0009142,1.73e-07,61;UBERON:0000160,4.05e-07,31;UBERON:0005256,7.77e-07,45;UBERON:0005409,9.74e-07,47|phase1_expression=56.2122453337827,242.886883716995,267.994552000437,337.247595607115,328.086703114857,174.762322060277,151.848216387092,61.2044553113072,19.9919985455367,36.045937053587,3.5955773327356,6.78063351460359,54.2706313881922,70.0237423376169,47.3015861778241,59.1227780778292,85.3465491316339,30.2843678743908,32.9074640653773,34.3755617956405,89.7206711093786,28.0000482386497,35.0007717446173,244.948399296706,199.815483809505,347.984570253702,320.486925142352,252.747755940548,259.001920719038,222.038544318499,100.222190816198,36.196748387199,33.2134985295668,0,229.348186082512,177.704835888228,151.493662346678,46.0384793810599,54.693474116666,55.4935168612226,29.4115744015507,40.2996836125483,38.3553178894611,66.9771071630071,62.0426819063429,48.2727958185222,24.2541316747892,40.552679086763,26.8017142936056,34.0252323379996,45.3556006066175,35.9381410912429,15.268217151254,28.2891235384424,39.3229744996683,42.1905475098953,113.753775655686,133.559071899858,6.27181028664753,6.87688273053643,9.50747105259269,32.8679196107058,21.3430751066673,9.89889689009539,15.8218618010716,12.7886420690298,13.7816050838466,22.6688800139717,7.46565208621039,7.02030879324791,10.3059231062177,17.424710048632,29.3755159465646,13.229006315215,12.2682202903343,12.8690630125403,11.0115880999389,11.2364857514965,10.1380311949121,4.87979264601717,7.13603620098795,7.29278718779464,21.4970909231063,23.6360296213306,20.6277634498694,16.4992007865254,16.2303716110977,12.8615617619457,11.0560242266449,39.2972112555285,60.0019491612473,1416.25770151136,1466.69816680762,1482.02496423745,1228.72720539354,1261.6437140661,622.590114444056,77.5457967730163,88.3272415649754,83.7414791589506,87.8862939406486,29.5150898052931,28.028576367731,7.11066703153331,21.6491041011214,23.8158273546593,22.7486000256652,754.412893303829,26.4116641320115,159.426857355622,97.6722389693345,147.970222459701,178.265779378933,147.557465101017,140.048150198624,305.495483522441,21.7531571606249,1298.64682449773,85.8072235391378,190.237815538153,122.787884263979,80.9741672735821,149.113408974498,11.4184510834503,14.8707161837553,144.077779137646,59.9075622529601,79.7870632221232,79.4188919206654,15.2786452192919,24.2475319493872,13.8219787324151,13.0368240144207,15.8543583544805,15.7918913865266,14.7639549391659,90.1278370075299,86.960472456455,84.4094013168474,317.767202388576,28.7566178947575,26.8985462187163,26.1090088217756,48.3762465252645,22.3159717216355,31.515975190073,29.4223415117549,187.042537044308,17.2454394346274,20.9907748986279,26.2167175004284,55.675716036604,90.0873087490937,61.6406334744235,80.8723796083218,111.857257951993,109.545257220865,89.2997237688062,76.4399813374144,73.7367750226387,125.471442089886,159.354924392998,149.385928154268,267.009062481227,340.621785255331,403.678928086708,341.780313383115,469.630207000756,865.091130995167,1077.75940167926,1036.22152361513,1274.42529038662,800.918820581753,873.54957971126,19.3466752678997,24.8000115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| ||
|EntrezGene=52538 | |||
|HGNC= | |||
|MCL_coexpression_id=201 | |||
|UniProt=Q8BWT1 | |||
|association_with_transcript=0bp_to_NM_177470,uc008fpt.1_5end | |||
|description=CAGE_peak_1_at_Acaa2_5end | |||
|id=chr18:74938857..74938878,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!7.72e-14!47;UBERON:0002107!1.31e-10!22;UBERON:0007499!1.31e-10!22;UBERON:0006925!1.31e-10!22;UBERON:0009497!1.31e-10!22;UBERON:0000015!1.31e-10!22;UBERON:0002423!1.31e-10!22;UBERON:0006235!1.31e-10!22;UBERON:0008835!1.31e-10!22;UBERON:0003894!1.31e-10!22;UBERON:0004161!1.31e-10!22;UBERON:0008836!1.31e-10!22;UBERON:0009854!1.34e-10!23;UBERON:0009856!1.34e-10!23;UBERON:0002365!2.38e-09!25;UBERON:0002330!2.38e-09!25;UBERON:0001007!2.40e-08!128;UBERON:0001555!2.40e-08!128;UBERON:0007026!2.40e-08!128;UBERON:0005172!3.65e-08!49;UBERON:0005173!3.65e-08!49;UBERON:0002417!3.65e-08!49;UBERON:0000916!3.65e-08!49;UBERON:0004921!5.78e-08!126;UBERON:0004185!5.78e-08!126;UBERON:0004119!1.17e-07!130;UBERON:0000925!1.17e-07!130;UBERON:0006595!1.17e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,7.72e-14,47;UBERON:0002107,1.31e-10,22;UBERON:0007499,1.31e-10,22;UBERON:0006925,1.31e-10,22;UBERON:0009497,1.31e-10,22;UBERON:0000015,1.31e-10,22;UBERON:0002423,1.31e-10,22;UBERON:0006235,1.31e-10,22;UBERON:0008835,1.31e-10,22;UBERON:0003894,1.31e-10,22;UBERON:0004161,1.31e-10,22;UBERON:0008836,1.31e-10,22;UBERON:0009854,1.34e-10,23;UBERON:0009856,1.34e-10,23;UBERON:0002365,2.38e-09,25;UBERON:0002330,2.38e-09,25;UBERON:0001007,1.77e-08,116;UBERON:0001555,1.77e-08,116;UBERON:0007026,1.77e-08,116;UBERON:0005172,3.65e-08,49;UBERON:0005173,3.65e-08,49;UBERON:0002417,3.65e-08,49;UBERON:0000916,3.65e-08,49;UBERON:0004921,4.27e-08,114;UBERON:0004119,9.38e-08,118;UBERON:0000925,9.38e-08,118;UBERON:0006595,9.38e-08,118;UBERON:0003104,1.73e-07,61;UBERON:0009142,1.73e-07,61;UBERON:0000160,4.05e-07,31;UBERON:0005256,7.77e-07,45;UBERON:0005409,9.74e-07,47 | |||
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| |||
|short_description=p1@Acaa2 | |||
}} |
Revision as of 16:44, 13 September 2013
Short description: | p1@Acaa2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Acaa2_5end |
Coexpression cluster: | MCL_coexpression_mm9:201 |
Association with transcript: | 0bp_to_NM_177470, uc008fpt.1_5end |
EntrezGene: | Acaa2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 7.72e-14 | 47 |
liver | 1.31e-10 | 22 |
epithelial sac | 1.31e-10 | 22 |
digestive gland | 1.31e-10 | 22 |
epithelium of foregut-midgut junction | 1.31e-10 | 22 |
anatomical boundary | 1.31e-10 | 22 |
hepatobiliary system | 1.31e-10 | 22 |
foregut-midgut junction | 1.31e-10 | 22 |
hepatic diverticulum | 1.31e-10 | 22 |
liver primordium | 1.31e-10 | 22 |
septum transversum | 1.31e-10 | 22 |
liver bud | 1.31e-10 | 22 |
digestive tract diverticulum | 1.34e-10 | 23 |
sac | 1.34e-10 | 23 |
exocrine gland | 2.38e-09 | 25 |
exocrine system | 2.38e-09 | 25 |
digestive system | 1.77e-08 | 116 |
digestive tract | 1.77e-08 | 116 |
primitive gut | 1.77e-08 | 116 |
abdomen element | 3.65e-08 | 49 |
abdominal segment element | 3.65e-08 | 49 |
abdominal segment of trunk | 3.65e-08 | 49 |
abdomen | 3.65e-08 | 49 |
subdivision of digestive tract | 4.27e-08 | 114 |
endoderm-derived structure | 9.38e-08 | 118 |
endoderm | 9.38e-08 | 118 |
presumptive endoderm | 9.38e-08 | 118 |
mesenchyme | 1.73e-07 | 61 |
entire embryonic mesenchyme | 1.73e-07 | 61 |
intestine | 4.05e-07 | 31 |
trunk mesenchyme | 7.77e-07 | 45 |
gastrointestinal system | 9.74e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.