FFCP PHASE1:Mm9::chr19:4191076..4191083,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=108995|HGNC=|MCL_coexpression_id=36|UniProt=Q8C9V1|association_with_transcript=-29bp_to_ENSMUST00000045864,NM_178650,uc008fzf.1,uc012bgh.1_5end|description=CAGE_peak_4_at_Tbc1d10c_5end|id=chr19:4191076..4191083,-|ontology_enrichment_celltype=CL:0000988!5.68e-13!32;CL:0002032!5.68e-13!32;CL:0000037!5.68e-13!32;CL:0000566!5.68e-13!32;CL:0000837!5.68e-13!32;CL:0002031!2.44e-11!25;CL:0000542!1.75e-10!13;CL:0000051!1.75e-10!13;CL:0000838!3.99e-10!12;CL:0000084!2.41e-09!11;CL:0000827!2.41e-09!11;CL:0002320!9.72e-09!46;CL:0000134!9.72e-09!46;CL:0000791!7.09e-08!9;CL:0000789!7.09e-08!9;CL:0002420!7.09e-08!9;CL:0002419!7.09e-08!9;CL:0000790!7.09e-08!9;CL:0000624!5.06e-07!8;CL:0000738!5.49e-07!17;CL:0002087!5.49e-07!17|ontology_enrichment_celltype_v019_2=CL:0000838,3.93e-11,12;CL:0000542,3.31e-10,13;CL:0000051,3.31e-10,13;CL:0002031,7.51e-10,25;CL:0000084,3.29e-09,11;CL:0000827,3.29e-09,11;CL:0000791,2.91e-08,9;CL:0000789,2.91e-08,9;CL:0002420,2.91e-08,9;CL:0002419,2.91e-08,9;CL:0000790,2.91e-08,9;CL:0000738,1.35e-07,17;CL:0002087,1.35e-07,17;CL:0000988,2.56e-07,32;CL:0002032,2.56e-07,32;CL:0000037,2.56e-07,32;CL:0000837,2.56e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.38e-09,3;DOID:4045,1.38e-09,3|ontology_enrichment_uberon=UBERON:0004177!1.13e-17!29;UBERON:0002193!1.86e-16!48;UBERON:0002390!5.64e-16!45;UBERON:0003061!5.64e-16!45;UBERON:0002370!6.19e-15!23;UBERON:0000974!6.19e-15!23;UBERON:0004807!6.19e-15!23;UBERON:0005058!6.19e-15!23;UBERON:0003351!6.19e-15!23;UBERON:0009113!6.19e-15!23;UBERON:0003295!6.19e-15!23;UBERON:0009722!6.19e-15!23;UBERON:0005562!6.19e-15!23;UBERON:0007690!6.19e-15!23;UBERON:0006562!5.71e-14!24;UBERON:0003408!5.71e-14!24;UBERON:0001557!5.71e-14!24;UBERON:0001042!5.71e-14!24;UBERON:0008814!5.71e-14!24;UBERON:0009145!5.71e-14!24;UBERON:0000072!1.57e-11!27;UBERON:0002405!1.04e-10!70;UBERON:0000065!1.62e-10!41;UBERON:0001004!4.86e-10!42;UBERON:0005057!1.88e-09!51;UBERON:0002384!9.72e-09!46;UBERON:0000063!4.75e-08!35|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.09e-28,23;UBERON:0000974,2.09e-28,23;UBERON:0004807,2.09e-28,23;UBERON:0005058,2.09e-28,23;UBERON:0003351,2.09e-28,23;UBERON:0009113,2.09e-28,23;UBERON:0003295,2.09e-28,23;UBERON:0009722,2.09e-28,23;UBERON:0005562,2.09e-28,23;UBERON:0007690,2.09e-28,23;UBERON:0006562,4.36e-27,24;UBERON:0003408,4.36e-27,24;UBERON:0001557,4.36e-27,24;UBERON:0001042,4.36e-27,24;UBERON:0008814,4.36e-27,24;UBERON:0009145,4.36e-27,24;UBERON:0000072,1.02e-23,27;UBERON:0004177,7.42e-22,29;UBERON:0005057,7.42e-22,29;UBERON:0002193,1.19e-19,48;UBERON:0002405,1.19e-19,48;UBERON:0002390,6.11e-19,45;UBERON:0003061,6.11e-19,45;UBERON:0000077,1.49e-17,35;UBERON:0007811,5.65e-17,36;UBERON:0000065,1.65e-14,41;UBERON:0001004,4.37e-14,42;UBERON:0000153,1.11e-13,43;UBERON:0000490,8.15e-12,66;UBERON:0003929,5.38e-10,55;UBERON:0002368,6.73e-09,60;UBERON:0002530,5.69e-08,65;UBERON:0003081,6.10e-08,87;UBERON:0005911,2.50e-07,69;UBERON:0000926,3.70e-07,120;UBERON:0004120,3.70e-07,120;UBERON:0006603,3.70e-07,120;UBERON:0000949,6.81e-07,72|phase1_expression=0.160148847104794,0,0,0,0,0,0,2.32421982194837,0.422366166455,0.70219357896598,0.171217968225505,0.239316476986009,2.73921167889929,2.53519167015092,0.666219523631325,0.404950534779652,0.699561878128147,1.26184866143295,1.23402990245165,2.12194825899015,0.0850432901510698,0.695036658406197,1.04479915655574,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0,0,2.09265815368454,3.1253413780952,1.0470474879476,1.17646297606203,1.36609096991689,2.42755176515577,0,0,0,0,0,0,0,0,0,1.17447824240415,1.45072428402269,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,0,0,0,0,0,0,0,0,1.55362730188303,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0.884610551949874,0,0.441683036920787,0,0,0,0,0.255457055208591,0.599075622529601,0.599902730993408,0.508280908292259,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0.852490498186778,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0,0,0.146199987425332,0,0,0,0,0,0.264450566663544,0.213288250535234,0,0.257734922644187,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0.341741761595705,0.206386867963223,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0.339956859987711,0.279902904647316,0.829199842826543,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,2.8441000856536,0.608175645870493,1.84879722896689,2.98817892848929,1.61124026100733,2.78153896693771,3.12508168751919,3.2491695978407,2.42319479875554,3.81034033274999,2.52065462842101,2.14407337627455,2.88635524920988,3.3894301632655,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0,0,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0,0.231867835620421|short_description=p4@Tbc1d10c}} | ||
|EntrezGene=108995 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=Q8C9V1 | |||
|association_with_transcript=-29bp_to_ENSMUST00000045864,NM_178650,uc008fzf.1,uc012bgh.1_5end | |||
|description=CAGE_peak_4_at_Tbc1d10c_5end | |||
|id=chr19:4191076..4191083,- | |||
|ontology_enrichment_celltype=CL:0000988!5.68e-13!32;CL:0002032!5.68e-13!32;CL:0000037!5.68e-13!32;CL:0000566!5.68e-13!32;CL:0000837!5.68e-13!32;CL:0002031!2.44e-11!25;CL:0000542!1.75e-10!13;CL:0000051!1.75e-10!13;CL:0000838!3.99e-10!12;CL:0000084!2.41e-09!11;CL:0000827!2.41e-09!11;CL:0002320!9.72e-09!46;CL:0000134!9.72e-09!46;CL:0000791!7.09e-08!9;CL:0000789!7.09e-08!9;CL:0002420!7.09e-08!9;CL:0002419!7.09e-08!9;CL:0000790!7.09e-08!9;CL:0000624!5.06e-07!8;CL:0000738!5.49e-07!17;CL:0002087!5.49e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.93e-11,12;CL:0000542,3.31e-10,13;CL:0000051,3.31e-10,13;CL:0002031,7.51e-10,25;CL:0000084,3.29e-09,11;CL:0000827,3.29e-09,11;CL:0000791,2.91e-08,9;CL:0000789,2.91e-08,9;CL:0002420,2.91e-08,9;CL:0002419,2.91e-08,9;CL:0000790,2.91e-08,9;CL:0000738,1.35e-07,17;CL:0002087,1.35e-07,17;CL:0000988,2.56e-07,32;CL:0002032,2.56e-07,32;CL:0000037,2.56e-07,32;CL:0000837,2.56e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.38e-09,3;DOID:4045,1.38e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.13e-17!29;UBERON:0002193!1.86e-16!48;UBERON:0002390!5.64e-16!45;UBERON:0003061!5.64e-16!45;UBERON:0002370!6.19e-15!23;UBERON:0000974!6.19e-15!23;UBERON:0004807!6.19e-15!23;UBERON:0005058!6.19e-15!23;UBERON:0003351!6.19e-15!23;UBERON:0009113!6.19e-15!23;UBERON:0003295!6.19e-15!23;UBERON:0009722!6.19e-15!23;UBERON:0005562!6.19e-15!23;UBERON:0007690!6.19e-15!23;UBERON:0006562!5.71e-14!24;UBERON:0003408!5.71e-14!24;UBERON:0001557!5.71e-14!24;UBERON:0001042!5.71e-14!24;UBERON:0008814!5.71e-14!24;UBERON:0009145!5.71e-14!24;UBERON:0000072!1.57e-11!27;UBERON:0002405!1.04e-10!70;UBERON:0000065!1.62e-10!41;UBERON:0001004!4.86e-10!42;UBERON:0005057!1.88e-09!51;UBERON:0002384!9.72e-09!46;UBERON:0000063!4.75e-08!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.09e-28,23;UBERON:0000974,2.09e-28,23;UBERON:0004807,2.09e-28,23;UBERON:0005058,2.09e-28,23;UBERON:0003351,2.09e-28,23;UBERON:0009113,2.09e-28,23;UBERON:0003295,2.09e-28,23;UBERON:0009722,2.09e-28,23;UBERON:0005562,2.09e-28,23;UBERON:0007690,2.09e-28,23;UBERON:0006562,4.36e-27,24;UBERON:0003408,4.36e-27,24;UBERON:0001557,4.36e-27,24;UBERON:0001042,4.36e-27,24;UBERON:0008814,4.36e-27,24;UBERON:0009145,4.36e-27,24;UBERON:0000072,1.02e-23,27;UBERON:0004177,7.42e-22,29;UBERON:0005057,7.42e-22,29;UBERON:0002193,1.19e-19,48;UBERON:0002405,1.19e-19,48;UBERON:0002390,6.11e-19,45;UBERON:0003061,6.11e-19,45;UBERON:0000077,1.49e-17,35;UBERON:0007811,5.65e-17,36;UBERON:0000065,1.65e-14,41;UBERON:0001004,4.37e-14,42;UBERON:0000153,1.11e-13,43;UBERON:0000490,8.15e-12,66;UBERON:0003929,5.38e-10,55;UBERON:0002368,6.73e-09,60;UBERON:0002530,5.69e-08,65;UBERON:0003081,6.10e-08,87;UBERON:0005911,2.50e-07,69;UBERON:0000926,3.70e-07,120;UBERON:0004120,3.70e-07,120;UBERON:0006603,3.70e-07,120;UBERON:0000949,6.81e-07,72 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,2.32421982194837,0.422366166455,0.70219357896598,0.171217968225505,0.239316476986009,2.73921167889929,2.53519167015092,0.666219523631325,0.404950534779652,0.699561878128147,1.26184866143295,1.23402990245165,2.12194825899015,0.0850432901510698,0.695036658406197,1.04479915655574,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0,0,2.09265815368454,3.1253413780952,1.0470474879476,1.17646297606203,1.36609096991689,2.42755176515577,0,0,0,0,0,0,0,0,0,1.17447824240415,1.45072428402269,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,0,0,0,0,0,0,0,0,1.55362730188303,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0.884610551949874,0,0.441683036920787,0,0,0,0,0.255457055208591,0.599075622529601,0.599902730993408,0.508280908292259,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0.852490498186778,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0,0,0.146199987425332,0,0,0,0,0,0.264450566663544,0.213288250535234,0,0.257734922644187,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0.341741761595705,0.206386867963223,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0.339956859987711,0.279902904647316,0.829199842826543,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,2.8441000856536,0.608175645870493,1.84879722896689,2.98817892848929,1.61124026100733,2.78153896693771,3.12508168751919,3.2491695978407,2.42319479875554,3.81034033274999,2.52065462842101,2.14407337627455,2.88635524920988,3.3894301632655,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0,0,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p4@Tbc1d10c | |||
}} |
Revision as of 17:38, 13 September 2013
Short description: | p4@Tbc1d10c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tbc1d10c_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | -29bp_to_ENSMUST00000045864, NM_178650, uc008fzf.1, uc012bgh.1_5end |
EntrezGene: | Tbc1d10c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.93e-11 | 12 |
lymphocyte | 3.31e-10 | 13 |
common lymphoid progenitor | 3.31e-10 | 13 |
hematopoietic lineage restricted progenitor cell | 7.51e-10 | 25 |
T cell | 3.29e-09 | 11 |
pro-T cell | 3.29e-09 | 11 |
mature alpha-beta T cell | 2.91e-08 | 9 |
alpha-beta T cell | 2.91e-08 | 9 |
immature T cell | 2.91e-08 | 9 |
mature T cell | 2.91e-08 | 9 |
immature alpha-beta T cell | 2.91e-08 | 9 |
leukocyte | 1.35e-07 | 17 |
nongranular leukocyte | 1.35e-07 | 17 |
hematopoietic cell | 2.56e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.56e-07 | 32 |
hematopoietic stem cell | 2.56e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.56e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.38e-09 | 3 |
muscle cancer | 1.38e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.