FFCP PHASE1:Mm9::chr1:125942580..125942662,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=269109|HGNC=|MCL_coexpression_id=1|UniProt=Q6NXK7,E9QN98|association_with_transcript=-444bp_to_ENSMUST00000035420,ENSMUST00000112606,NM_199021,uc007cjx.2_5end|description=CAGE_peak_1_at_Dpp10_5end|id=chr1:125942580..125942662,-|ontology_enrichment_celltype=CL:0000117!6.09e-13!23;CL:0000337!6.09e-13!23;CL:0000540!2.43e-12!33;CL:0000047!2.43e-12!33;CL:0000031!2.43e-12!33;CL:0000404!2.43e-12!33;CL:0000221!1.31e-08!44;CL:0000133!1.31e-08!44;CL:0000393!2.18e-08!39;CL:0000211!2.18e-08!39;CL:0002319!3.30e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,7.19e-16,23;CL:0000337,7.19e-16,23;CL:0000540,7.82e-13,33;CL:0000047,7.82e-13,33;CL:0000031,7.82e-13,33;CL:0000404,7.82e-13,33;CL:0000221,1.16e-09,44;CL:0000133,1.16e-09,44;CL:0000393,1.62e-09,39;CL:0000211,1.62e-09,39;CL:0002319,3.76e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.22e-28!73;UBERON:0005743!2.22e-28!73;UBERON:0000073!1.01e-26!75;UBERON:0001016!1.01e-26!75;UBERON:0001049!1.23e-24!52;UBERON:0005068!1.23e-24!52;UBERON:0006241!1.23e-24!52;UBERON:0007135!1.23e-24!52;UBERON:0000033!1.32e-24!63;UBERON:0000955!1.58e-23!50;UBERON:0006238!1.58e-23!50;UBERON:0002346!2.05e-23!71;UBERON:0003075!2.05e-23!71;UBERON:0007284!2.05e-23!71;UBERON:0002616!1.11e-22!49;UBERON:0004121!4.73e-22!102;UBERON:0000924!4.73e-22!102;UBERON:0006601!4.73e-22!102;UBERON:0003056!9.23e-20!49;UBERON:0003080!6.03e-19!40;UBERON:0002780!3.21e-18!39;UBERON:0001890!3.21e-18!39;UBERON:0006240!3.21e-18!39;UBERON:0002020!1.90e-17!34;UBERON:0007811!3.66e-15!86;UBERON:0002791!3.76e-14!29;UBERON:0003528!3.76e-14!29;UBERON:0001893!3.76e-14!29;UBERON:0000153!2.14e-13!94;UBERON:0000956!1.89e-09!21;UBERON:0001869!1.89e-09!21;UBERON:0000203!1.89e-09!21;UBERON:0002021!8.36e-09!10;UBERON:0000411!8.36e-09!10;UBERON:0001950!8.36e-09!10;UBERON:0002619!1.94e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.27e-33,73;UBERON:0000073,7.26e-32,54;UBERON:0001016,2.37e-31,75;UBERON:0001049,9.60e-30,52;UBERON:0005068,9.60e-30,52;UBERON:0006241,9.60e-30,52;UBERON:0007135,9.60e-30,52;UBERON:0002346,8.17e-29,64;UBERON:0003075,8.17e-29,64;UBERON:0007284,8.17e-29,64;UBERON:0004121,3.13e-27,95;UBERON:0000924,3.13e-27,95;UBERON:0006601,3.13e-27,95;UBERON:0010371,1.70e-25,73;UBERON:0000955,1.92e-25,47;UBERON:0006238,1.92e-25,47;UBERON:0002616,2.30e-24,46;UBERON:0003056,1.18e-22,49;UBERON:0002020,1.29e-22,34;UBERON:0003080,1.70e-22,40;UBERON:0002780,1.53e-21,39;UBERON:0001890,1.53e-21,39;UBERON:0006240,1.53e-21,39;UBERON:0003528,3.43e-18,29;UBERON:0002791,3.43e-18,29;UBERON:0001893,3.43e-18,29;UBERON:0010314,2.77e-16,92;UBERON:0000956,6.77e-12,21;UBERON:0001869,6.77e-12,21;UBERON:0000203,6.77e-12,21;UBERON:0002619,1.93e-11,17;UBERON:0002021,2.69e-11,10;UBERON:0000411,2.69e-11,10;UBERON:0001950,2.69e-11,10;UBERON:0002420,1.12e-07,8;UBERON:0007245,1.12e-07,8;UBERON:0010009,1.12e-07,8;UBERON:0010011,1.12e-07,8;UBERON:0000454,1.12e-07,8;UBERON:0003076,1.27e-07,12;UBERON:0003057,1.27e-07,12|phase1_expression=5.92550734287738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,9.71119012126069,10.5798195854407,10.1413024560989,0,0,0,0,0,1.19840044207362,1.15265491596466,1.45165457231869,0.540023753326763,1.26194976810829,10.8547374073445,8.39300455616131,1.71487118900936,1.91690942036473,2.75765635983006,15.4162233399144,14.6840438797966,15.5142598588806,8.17694983927202,9.14876436024097,9.89735404057844,8.93385596804419,13.5063026407603,10.5430790965999,16.2045722010517,17.3693450574906,12.1159639786445,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,3.09855523508697,0,0,0,0,0.253359865475099,0,0.45673551887624,0.258937883647172,0,0.520455980298408,0,0.230615497256059,0.301445281105245,0.470354828542819,0,0,0,0,0.161766849947409,0,0,0,21.6657789788545,27.6469652993761,0.255457055208591,0,0,0,17.0761328921498,15.0975198930147,7.16229807043327,17.9039049798045,22.5029602450691,13.9217989854905,16.061885043708,0.611036183101898,0,0,0,0.130120442962704,0.689706313300419,1.0803727788321,1.80845781402858,2.4493139694478,1.92170580427275,2.52994656311268,1.29351685369508,0,0.378212160335639,0.175951124163949,0,0.278047249225598,0,0,1.79130840136644,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0,3.99550902271842,7.71784592844633,0,0,0.426576501070468,0.928946687441754,0.77320476793256,0,0.667134131534611,1.33157938278791,0.949058123089023,0.658795818896044,0.754005626400808,1.59165177632921,1.36474860983384,0,0.216138049874694,0.796565093017469,0.569003702859245,0.342745537829186,0,0,0.387904974335251,0.280543279561274,0.189709611372772,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,7.38532713943843,7.97039468826982,0,0,0.315508219416257,0.780877488593277,1.29254038639679,0.47793759590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| ||
|EntrezGene=269109 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q6NXK7,E9QN98 | |||
|association_with_transcript=-444bp_to_ENSMUST00000035420,ENSMUST00000112606,NM_199021,uc007cjx.2_5end | |||
|description=CAGE_peak_1_at_Dpp10_5end | |||
|id=chr1:125942580..125942662,- | |||
|ontology_enrichment_celltype=CL:0000117!6.09e-13!23;CL:0000337!6.09e-13!23;CL:0000540!2.43e-12!33;CL:0000047!2.43e-12!33;CL:0000031!2.43e-12!33;CL:0000404!2.43e-12!33;CL:0000221!1.31e-08!44;CL:0000133!1.31e-08!44;CL:0000393!2.18e-08!39;CL:0000211!2.18e-08!39;CL:0002319!3.30e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.19e-16,23;CL:0000337,7.19e-16,23;CL:0000540,7.82e-13,33;CL:0000047,7.82e-13,33;CL:0000031,7.82e-13,33;CL:0000404,7.82e-13,33;CL:0000221,1.16e-09,44;CL:0000133,1.16e-09,44;CL:0000393,1.62e-09,39;CL:0000211,1.62e-09,39;CL:0002319,3.76e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.22e-28!73;UBERON:0005743!2.22e-28!73;UBERON:0000073!1.01e-26!75;UBERON:0001016!1.01e-26!75;UBERON:0001049!1.23e-24!52;UBERON:0005068!1.23e-24!52;UBERON:0006241!1.23e-24!52;UBERON:0007135!1.23e-24!52;UBERON:0000033!1.32e-24!63;UBERON:0000955!1.58e-23!50;UBERON:0006238!1.58e-23!50;UBERON:0002346!2.05e-23!71;UBERON:0003075!2.05e-23!71;UBERON:0007284!2.05e-23!71;UBERON:0002616!1.11e-22!49;UBERON:0004121!4.73e-22!102;UBERON:0000924!4.73e-22!102;UBERON:0006601!4.73e-22!102;UBERON:0003056!9.23e-20!49;UBERON:0003080!6.03e-19!40;UBERON:0002780!3.21e-18!39;UBERON:0001890!3.21e-18!39;UBERON:0006240!3.21e-18!39;UBERON:0002020!1.90e-17!34;UBERON:0007811!3.66e-15!86;UBERON:0002791!3.76e-14!29;UBERON:0003528!3.76e-14!29;UBERON:0001893!3.76e-14!29;UBERON:0000153!2.14e-13!94;UBERON:0000956!1.89e-09!21;UBERON:0001869!1.89e-09!21;UBERON:0000203!1.89e-09!21;UBERON:0002021!8.36e-09!10;UBERON:0000411!8.36e-09!10;UBERON:0001950!8.36e-09!10;UBERON:0002619!1.94e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.27e-33,73;UBERON:0000073,7.26e-32,54;UBERON:0001016,2.37e-31,75;UBERON:0001049,9.60e-30,52;UBERON:0005068,9.60e-30,52;UBERON:0006241,9.60e-30,52;UBERON:0007135,9.60e-30,52;UBERON:0002346,8.17e-29,64;UBERON:0003075,8.17e-29,64;UBERON:0007284,8.17e-29,64;UBERON:0004121,3.13e-27,95;UBERON:0000924,3.13e-27,95;UBERON:0006601,3.13e-27,95;UBERON:0010371,1.70e-25,73;UBERON:0000955,1.92e-25,47;UBERON:0006238,1.92e-25,47;UBERON:0002616,2.30e-24,46;UBERON:0003056,1.18e-22,49;UBERON:0002020,1.29e-22,34;UBERON:0003080,1.70e-22,40;UBERON:0002780,1.53e-21,39;UBERON:0001890,1.53e-21,39;UBERON:0006240,1.53e-21,39;UBERON:0003528,3.43e-18,29;UBERON:0002791,3.43e-18,29;UBERON:0001893,3.43e-18,29;UBERON:0010314,2.77e-16,92;UBERON:0000956,6.77e-12,21;UBERON:0001869,6.77e-12,21;UBERON:0000203,6.77e-12,21;UBERON:0002619,1.93e-11,17;UBERON:0002021,2.69e-11,10;UBERON:0000411,2.69e-11,10;UBERON:0001950,2.69e-11,10;UBERON:0002420,1.12e-07,8;UBERON:0007245,1.12e-07,8;UBERON:0010009,1.12e-07,8;UBERON:0010011,1.12e-07,8;UBERON:0000454,1.12e-07,8;UBERON:0003076,1.27e-07,12;UBERON:0003057,1.27e-07,12 | |||
|phase1_expression=5.92550734287738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,9.71119012126069,10.5798195854407,10.1413024560989,0,0,0,0,0,1.19840044207362,1.15265491596466,1.45165457231869,0.540023753326763,1.26194976810829,10.8547374073445,8.39300455616131,1.71487118900936,1.91690942036473,2.75765635983006,15.4162233399144,14.6840438797966,15.5142598588806,8.17694983927202,9.14876436024097,9.89735404057844,8.93385596804419,13.5063026407603,10.5430790965999,16.2045722010517,17.3693450574906,12.1159639786445,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,3.09855523508697,0,0,0,0,0.253359865475099,0,0.45673551887624,0.258937883647172,0,0.520455980298408,0,0.230615497256059,0.301445281105245,0.470354828542819,0,0,0,0,0.161766849947409,0,0,0,21.6657789788545,27.6469652993761,0.255457055208591,0,0,0,17.0761328921498,15.0975198930147,7.16229807043327,17.9039049798045,22.5029602450691,13.9217989854905,16.061885043708,0.611036183101898,0,0,0,0.130120442962704,0.689706313300419,1.0803727788321,1.80845781402858,2.4493139694478,1.92170580427275,2.52994656311268,1.29351685369508,0,0.378212160335639,0.175951124163949,0,0.278047249225598,0,0,1.79130840136644,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0,3.99550902271842,7.71784592844633,0,0,0.426576501070468,0.928946687441754,0.77320476793256,0,0.667134131534611,1.33157938278791,0.949058123089023,0.658795818896044,0.754005626400808,1.59165177632921,1.36474860983384,0,0.216138049874694,0.796565093017469,0.569003702859245,0.342745537829186,0,0,0.387904974335251,0.280543279561274,0.189709611372772,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,7.38532713943843,7.97039468826982,0,0,0.315508219416257,0.780877488593277,1.29254038639679,0.477937595905104,0,0,0.404810701674894,2.33804686329049,1.97643888973262,42.4144137676785,0,1.24645922567079,1.46598263418218,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0,0.948110273807448,0,1.03135543248187,2.04263763452273,0.900305470156551,0.905510786479282,1.50035924522115,4.43350584105684,2.31879462882692,3.1264313914403,3.34911444026059,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0.291480836629851,6.11903496634682,0,0.412773735926445,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,1.08005340821801,0.209088296014469,2.18362563746178,0.809186078308924,0.41326727862668,0.26175594198403,0.648074866458964,0,0,0,0.165458490457098,0,0.129159823477731,0,0.352071715937262,0,0,0,0,0.316011120628178,0.608175645870493,0.513554785824136,0.51968329191118,0,0,0.120195449519969,0.295379054349154,0,0,0.100826185136841,0,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,19.2015626489803,22.5559365888517,18.3326564300607,14.6075204992134,26.0331357512844,24.9279986138601,16.2005400055633,22.516060161211,20.8445508132734,24.8524949640874,0,1.99512436700516,3.07320490357441,2.43106717068294,1.46729213839588,2.20612210140017,1.77797382241292,2.47242068686673,1.28367683836726,2.02157769411038,1.01391719956096,1.69763707247469,1.40462261204824,3.3293079250532,2.5845961030026,3.81034953026459,3.01299247456624,2.50781986602817,1.23625770240992,1.91358596174717,1.37147700954166,3.37204031702741,1.66905332963125,1.59881058295561,2.1645157495526,2.79228206042532,1.82927972872773,1.57841826862706,2.03706170768793,1.12228454331548,3.08451047122853,1.97008964751127,1.63692417267876,2.78886314134739,1.35034627686799,4.99621155875892,1.87145286756327,1.50409737833809,0.57386499620653,1.10295709559758,0.695603506861264 | |||
|short_description=p1@Dpp10 | |||
}} |
Revision as of 18:37, 13 September 2013
Short description: | p1@Dpp10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dpp10_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -444bp_to_ENSMUST00000035420, ENSMUST00000112606, NM_199021, uc007cjx.2_5end |
EntrezGene: | Dpp10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.19e-16 | 23 |
neuroblast (sensu Vertebrata) | 7.19e-16 | 23 |
neuron | 7.82e-13 | 33 |
neuronal stem cell | 7.82e-13 | 33 |
neuroblast | 7.82e-13 | 33 |
electrically signaling cell | 7.82e-13 | 33 |
ectodermal cell | 1.16e-09 | 44 |
neurectodermal cell | 1.16e-09 | 44 |
electrically responsive cell | 1.62e-09 | 39 |
electrically active cell | 1.62e-09 | 39 |
neural cell | 3.76e-09 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.