FFCP PHASE1:Mm9::chr1:136131997..136132020,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11539|HGNC=|MCL_coexpression_id=2234|UniProt=Q60612,Q8CAH1|association_with_transcript=0bp_to_ENSMUST00000038191,ENSMUST00000086465,NM_001008533,NM_001039510,uc007crj.1,uc007crk.1_5end|description=CAGE_peak_2_at_Adora1_5end|id=chr1:136131997..136132020,-|ontology_enrichment_celltype=CL:0000117!8.28e-12!23;CL:0000337!8.28e-12!23|ontology_enrichment_celltype_v019_2=CL:0000117,9.86e-15,23;CL:0000337,9.86e-15,23;CL:0002319,1.11e-08,43;CL:0000221,2.96e-08,44;CL:0000133,2.96e-08,44;CL:0000540,1.33e-07,33;CL:0000047,1.33e-07,33;CL:0000031,1.33e-07,33;CL:0000404,1.33e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.87e-20!34;UBERON:0001049!3.65e-18!52;UBERON:0005068!3.65e-18!52;UBERON:0006241!3.65e-18!52;UBERON:0007135!3.65e-18!52;UBERON:0002791!1.65e-17!29;UBERON:0003528!1.65e-17!29;UBERON:0001893!1.65e-17!29;UBERON:0000955!7.22e-17!50;UBERON:0006238!7.22e-17!50;UBERON:0002616!1.93e-16!49;UBERON:0001017!1.32e-15!73;UBERON:0005743!1.32e-15!73;UBERON:0000073!7.12e-15!75;UBERON:0001016!7.12e-15!75;UBERON:0002346!1.12e-14!71;UBERON:0003075!1.12e-14!71;UBERON:0007284!1.12e-14!71;UBERON:0003080!7.55e-14!40;UBERON:0000956!7.92e-14!21;UBERON:0001869!7.92e-14!21;UBERON:0000203!7.92e-14!21;UBERON:0002780!1.87e-13!39;UBERON:0001890!1.87e-13!39;UBERON:0006240!1.87e-13!39;UBERON:0000025!3.31e-12!114;UBERON:0002619!5.70e-12!17;UBERON:0000033!1.20e-10!63;UBERON:0004111!2.65e-10!122;UBERON:0003056!6.44e-10!49;UBERON:0004121!9.07e-10!102;UBERON:0000924!9.07e-10!102;UBERON:0006601!9.07e-10!102;UBERON:0002021!9.43e-08!10;UBERON:0000411!9.43e-08!10;UBERON:0001950!9.43e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.32e-26,34;UBERON:0000073,1.17e-23,54;UBERON:0001049,3.80e-22,52;UBERON:0005068,3.80e-22,52;UBERON:0006241,3.80e-22,52;UBERON:0007135,3.80e-22,52;UBERON:0003528,4.56e-22,29;UBERON:0002791,4.56e-22,29;UBERON:0001893,4.56e-22,29;UBERON:0001017,1.76e-20,73;UBERON:0001016,2.35e-19,75;UBERON:0000955,1.74e-18,47;UBERON:0006238,1.74e-18,47;UBERON:0002616,5.95e-18,46;UBERON:0000956,2.49e-17,21;UBERON:0001869,2.49e-17,21;UBERON:0000203,2.49e-17,21;UBERON:0003080,2.89e-16,40;UBERON:0002780,9.17e-16,39;UBERON:0001890,9.17e-16,39;UBERON:0006240,9.17e-16,39;UBERON:0002619,6.10e-15,17;UBERON:0002346,1.32e-14,64;UBERON:0003075,1.32e-14,64;UBERON:0007284,1.32e-14,64;UBERON:0010314,5.13e-12,92;UBERON:0004121,5.16e-11,95;UBERON:0000924,5.16e-11,95;UBERON:0006601,5.16e-11,95;UBERON:0003056,7.65e-11,49;UBERON:0010371,9.12e-11,73;UBERON:0000025,4.85e-10,114;UBERON:0002021,1.60e-09,10;UBERON:0000411,1.60e-09,10;UBERON:0001950,1.60e-09,10;UBERON:0004111,1.63e-08,122;UBERON:0001954,7.48e-07,7;UBERON:0003022,7.48e-07,7;UBERON:0002421,7.48e-07,7;UBERON:0000349,7.48e-07,7;UBERON:0002600,7.48e-07,7|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0,0,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91199134694921,0,0,0,0,0.57423196411502,0.86152399231815,0.646413698057667,0,0,0.221730510655305,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,7.41285531693518,6.59058548203415,9.13820525649132,0.699932108126813,2.87505128729943,0,0,0,0,0.286533439938757,1.03134418455488,3.03474691289397,4.7609188134483,3.1691570175309,0,0,0,0,0,3.59520132622086,2.30530983192933,4.14758449233911,3.91517221161903,3.78584930432488,8.2838785477103,6.40518768759679,7.10446635446733,5.84657373211242,6.43453150627015,4.40463523997555,6.38436690425939,6.14426133024974,3.03338461779446,4.20843160571084,3.12548022334056,4.4669279840221,2.25105044012672,3.97275444219706,7.36571463684169,6.40672563595963,4.65998614563251,0.151452386666368,0.151143120213571,0.869593466105033,0.860423876981386,0.679971333707751,2.69851595818909,2.59910566979068,1.79210754838934,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,4.15637989381509,2.77576522825817,2.13125834818499,2.53677046981664,4.82312449768392,2.3517741427141,7.1629957057915,0.494389935468748,0.722996784599558,0,0,0,0,0,3.51336956413857,2.30391377494801,0.255457055208591,0,0,0,3.44518470631092,10.0650132620098,13.9476330845279,9.21268897019065,10.2286182932132,4.77912502486988,6.48965052271031,0.203678727700633,0.248813941220186,0,0.631325567659422,0,0,0.180062129805349,0,0.340182495756639,0.12811372028485,0.281105173679186,0.517406741478031,0.431135985865684,0.189106080167819,0.351902248327898,0.219195732427575,0.556094498451196,0,0.411564272815887,1.59227413454795,0,0,0,1.44988040774851,1.40715635988658,1.08037236876609,0.23674473558521,1.37734962223183,0.308534225774757,0.930135779001631,0.268273401399619,0.583826711835847,0.493679549740441,0.164167464079095,0.405344047729279,0,0.658650345873152,0.134206418760372,17.2437757822584,9.98174740079059,0,0,0,0.232236671860439,0.38660238396628,0.80673409849337,0.444756087689741,0.570676878337677,0.474529061544512,0.988193728344065,0,0.198956472041151,0,0.898819408654221,0,0,1.32767530667157,0.799739588268102,1.1270773567308,1.425559294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| ||
|EntrezGene=11539 | |||
|HGNC= | |||
|MCL_coexpression_id=2234 | |||
|UniProt=Q60612,Q8CAH1 | |||
|association_with_transcript=0bp_to_ENSMUST00000038191,ENSMUST00000086465,NM_001008533,NM_001039510,uc007crj.1,uc007crk.1_5end | |||
|description=CAGE_peak_2_at_Adora1_5end | |||
|id=chr1:136131997..136132020,- | |||
|ontology_enrichment_celltype=CL:0000117!8.28e-12!23;CL:0000337!8.28e-12!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.86e-15,23;CL:0000337,9.86e-15,23;CL:0002319,1.11e-08,43;CL:0000221,2.96e-08,44;CL:0000133,2.96e-08,44;CL:0000540,1.33e-07,33;CL:0000047,1.33e-07,33;CL:0000031,1.33e-07,33;CL:0000404,1.33e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.87e-20!34;UBERON:0001049!3.65e-18!52;UBERON:0005068!3.65e-18!52;UBERON:0006241!3.65e-18!52;UBERON:0007135!3.65e-18!52;UBERON:0002791!1.65e-17!29;UBERON:0003528!1.65e-17!29;UBERON:0001893!1.65e-17!29;UBERON:0000955!7.22e-17!50;UBERON:0006238!7.22e-17!50;UBERON:0002616!1.93e-16!49;UBERON:0001017!1.32e-15!73;UBERON:0005743!1.32e-15!73;UBERON:0000073!7.12e-15!75;UBERON:0001016!7.12e-15!75;UBERON:0002346!1.12e-14!71;UBERON:0003075!1.12e-14!71;UBERON:0007284!1.12e-14!71;UBERON:0003080!7.55e-14!40;UBERON:0000956!7.92e-14!21;UBERON:0001869!7.92e-14!21;UBERON:0000203!7.92e-14!21;UBERON:0002780!1.87e-13!39;UBERON:0001890!1.87e-13!39;UBERON:0006240!1.87e-13!39;UBERON:0000025!3.31e-12!114;UBERON:0002619!5.70e-12!17;UBERON:0000033!1.20e-10!63;UBERON:0004111!2.65e-10!122;UBERON:0003056!6.44e-10!49;UBERON:0004121!9.07e-10!102;UBERON:0000924!9.07e-10!102;UBERON:0006601!9.07e-10!102;UBERON:0002021!9.43e-08!10;UBERON:0000411!9.43e-08!10;UBERON:0001950!9.43e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.32e-26,34;UBERON:0000073,1.17e-23,54;UBERON:0001049,3.80e-22,52;UBERON:0005068,3.80e-22,52;UBERON:0006241,3.80e-22,52;UBERON:0007135,3.80e-22,52;UBERON:0003528,4.56e-22,29;UBERON:0002791,4.56e-22,29;UBERON:0001893,4.56e-22,29;UBERON:0001017,1.76e-20,73;UBERON:0001016,2.35e-19,75;UBERON:0000955,1.74e-18,47;UBERON:0006238,1.74e-18,47;UBERON:0002616,5.95e-18,46;UBERON:0000956,2.49e-17,21;UBERON:0001869,2.49e-17,21;UBERON:0000203,2.49e-17,21;UBERON:0003080,2.89e-16,40;UBERON:0002780,9.17e-16,39;UBERON:0001890,9.17e-16,39;UBERON:0006240,9.17e-16,39;UBERON:0002619,6.10e-15,17;UBERON:0002346,1.32e-14,64;UBERON:0003075,1.32e-14,64;UBERON:0007284,1.32e-14,64;UBERON:0010314,5.13e-12,92;UBERON:0004121,5.16e-11,95;UBERON:0000924,5.16e-11,95;UBERON:0006601,5.16e-11,95;UBERON:0003056,7.65e-11,49;UBERON:0010371,9.12e-11,73;UBERON:0000025,4.85e-10,114;UBERON:0002021,1.60e-09,10;UBERON:0000411,1.60e-09,10;UBERON:0001950,1.60e-09,10;UBERON:0004111,1.63e-08,122;UBERON:0001954,7.48e-07,7;UBERON:0003022,7.48e-07,7;UBERON:0002421,7.48e-07,7;UBERON:0000349,7.48e-07,7;UBERON:0002600,7.48e-07,7 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0,0,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91199134694921,0,0,0,0,0.57423196411502,0.86152399231815,0.646413698057667,0,0,0.221730510655305,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,7.41285531693518,6.59058548203415,9.13820525649132,0.699932108126813,2.87505128729943,0,0,0,0,0.286533439938757,1.03134418455488,3.03474691289397,4.7609188134483,3.1691570175309,0,0,0,0,0,3.59520132622086,2.30530983192933,4.14758449233911,3.91517221161903,3.78584930432488,8.2838785477103,6.40518768759679,7.10446635446733,5.84657373211242,6.43453150627015,4.40463523997555,6.38436690425939,6.14426133024974,3.03338461779446,4.20843160571084,3.12548022334056,4.4669279840221,2.25105044012672,3.97275444219706,7.36571463684169,6.40672563595963,4.65998614563251,0.151452386666368,0.151143120213571,0.869593466105033,0.860423876981386,0.679971333707751,2.69851595818909,2.59910566979068,1.79210754838934,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,4.15637989381509,2.77576522825817,2.13125834818499,2.53677046981664,4.82312449768392,2.3517741427141,7.1629957057915,0.494389935468748,0.722996784599558,0,0,0,0,0,3.51336956413857,2.30391377494801,0.255457055208591,0,0,0,3.44518470631092,10.0650132620098,13.9476330845279,9.21268897019065,10.2286182932132,4.77912502486988,6.48965052271031,0.203678727700633,0.248813941220186,0,0.631325567659422,0,0,0.180062129805349,0,0.340182495756639,0.12811372028485,0.281105173679186,0.517406741478031,0.431135985865684,0.189106080167819,0.351902248327898,0.219195732427575,0.556094498451196,0,0.411564272815887,1.59227413454795,0,0,0,1.44988040774851,1.40715635988658,1.08037236876609,0.23674473558521,1.37734962223183,0.308534225774757,0.930135779001631,0.268273401399619,0.583826711835847,0.493679549740441,0.164167464079095,0.405344047729279,0,0.658650345873152,0.134206418760372,17.2437757822584,9.98174740079059,0,0,0,0.232236671860439,0.38660238396628,0.80673409849337,0.444756087689741,0.570676878337677,0.474529061544512,0.988193728344065,0,0.198956472041151,0,0.898819408654221,0,0,1.32767530667157,0.799739588268102,1.1270773567308,1.4255592949172,1.35766741017338,1.54298803758701,0.69560190836683,0.295220295959204,0.31399745568275,0.740382983530803,1.1858105083486,0,0,0,0.405720242777006,2.17059443777175,5.0925170356284,5.75392274901621,4.86405680325106,4.11842119782122,2.87536413054709,2.60498663367952,2.49630138491648,1.01031551178845,1.07638448113147,2.8946611281802,0.184753190166605,0.947457058852424,0,0.169745085775188,0,0.670025029767263,0.952174563544055,0.975668239288994,0.315270288212382,0.221464689648775,0.159454768657487,0.491589944147214,0.345369963731791,0.433947175744535,0,0,0,0,3.05046120976805,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0.395287777946524,3.53453448063988,0,0.35613120733451,0.81443479676788,0,0,0,0.604647113929502,2.82907619633847,2.36241514304618,2.76691633149535,1.03371317267288,0.727067458955011,1.06949213515416,1.8962205476149,0,2.06271086496374,0.340439605753788,0.18006109403131,0,0,0.709360934569094,0.356737635204141,0.822745103010605,0,0.23467170806371,0.42366414172764,0.220528398054962,0,0,0,0,0,0,3.8939313422207,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0.139951452323658,0,1.90934123603023,0.158167996790568,0.813277868507395,0.972048067396211,0.627264888043406,1.09181281873089,1.07891477107857,1.73572257023205,0.523511883968059,0.518459893167171,0,6.76431526421028,6.87776111802302,3.97100377097034,3.50012139019286,2.84151611651008,4.39285926276023,2.22978753426933,9.37471570876441,13.5268554309167,8.69702834973622,9.21696020025169,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0,0,0,0.194915761479505,0,0,0,0.221985953374065,0.358855426437903,0,0.386379188064381,0.187682475451182,0.183151624267265,0,1.50471631210609,12.9892923801925,14.2700823317225,5.15605962095457,10.6548973053086,8.90607275701835,6.7985450765073,8.10027000278167,9.90706647093285,7.70342095273148,8.28416498802912,0.103787347584177,0,0.512200817262403,1.45864030240976,0.628839487883947,0.919217542250071,1.33348036680969,1.23621034343337,1.28367683836726,1.51618327058278,2.28131369901216,1.88626341386076,0.936415074698824,1.60062881012173,1.7230640686684,1.42888107384922,1.73826488917283,1.73618298417335,2.06042950401653,0.588795680537589,1.71434626192708,1.24233064311536,1.90748951957857,0.872078499793971,1.69396884747595,1.52306294205018,1.28049581010941,2.63069711437843,1.08643291076689,1.68342681497322,1.54225523561426,1.57607171800902,1.22769312950907,1.70430525304563,1.73615949883027,2.74791635731741,2.57324769289949,2.14871054048298,0,0.882365676478062,0.231867835620421 | |||
|short_description=p2@Adora1 | |||
}} |
Revision as of 18:57, 13 September 2013
Short description: | p2@Adora1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Adora1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2234 |
Association with transcript: | 0bp_to_ENSMUST00000038191, ENSMUST00000086465, NM_001008533, NM_001039510, uc007crj.1, uc007crk.1_5end |
EntrezGene: | Adora1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.86e-15 | 23 |
neuroblast (sensu Vertebrata) | 9.86e-15 | 23 |
neural cell | 1.11e-08 | 43 |
ectodermal cell | 2.96e-08 | 44 |
neurectodermal cell | 2.96e-08 | 44 |
neuron | 1.33e-07 | 33 |
neuronal stem cell | 1.33e-07 | 33 |
neuroblast | 1.33e-07 | 33 |
electrically signaling cell | 1.33e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.