FFCP PHASE1:Mm9::chr1:39707785..39707836,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=263764|HGNC=|MCL_coexpression_id=1|UniProt=Q8BGC9|association_with_transcript=190bp_to_ENSMUST00000053355,NM_170597,uc007atm.1_5end|description=CAGE_peak_1_at_Creg2_5end|id=chr1:39707785..39707836,-|ontology_enrichment_celltype=CL:0000540!5.59e-09!33;CL:0000047!5.59e-09!33;CL:0000031!5.59e-09!33;CL:0000404!5.59e-09!33;CL:0000117!4.30e-08!23;CL:0000337!4.30e-08!23;CL:0000393!2.03e-07!39;CL:0000211!2.03e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,5.36e-13,33;CL:0000047,5.36e-13,33;CL:0000031,5.36e-13,33;CL:0000404,5.36e-13,33;CL:0000117,8.06e-12,23;CL:0000337,8.06e-12,23;CL:0000393,1.03e-10,39;CL:0000211,1.03e-10,39;CL:0002319,3.32e-10,43;CL:0000221,8.42e-10,44;CL:0000133,8.42e-10,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.35e-19!102;UBERON:0000924!2.35e-19!102;UBERON:0006601!2.35e-19!102;UBERON:0001017!1.84e-18!73;UBERON:0005743!1.84e-18!73;UBERON:0000073!4.06e-18!75;UBERON:0001016!4.06e-18!75;UBERON:0002346!1.66e-16!71;UBERON:0003075!1.66e-16!71;UBERON:0007284!1.66e-16!71;UBERON:0000033!2.03e-13!63;UBERON:0001049!2.04e-13!52;UBERON:0005068!2.04e-13!52;UBERON:0006241!2.04e-13!52;UBERON:0007135!2.04e-13!52;UBERON:0000955!1.72e-12!50;UBERON:0006238!1.72e-12!50;UBERON:0002020!4.98e-12!34;UBERON:0002616!5.66e-12!49;UBERON:0003056!8.06e-11!49;UBERON:0003080!1.25e-09!40;UBERON:0002791!3.42e-09!29;UBERON:0003528!3.42e-09!29;UBERON:0001893!3.42e-09!29;UBERON:0002780!4.38e-09!39;UBERON:0001890!4.38e-09!39;UBERON:0006240!4.38e-09!39;UBERON:0002021!2.17e-08!10;UBERON:0000411!2.17e-08!10;UBERON:0001950!2.17e-08!10;UBERON:0007811!5.49e-08!86;UBERON:0000153!1.13e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.18e-29,73;UBERON:0001016,3.76e-28,75;UBERON:0004121,1.58e-23,95;UBERON:0000924,1.58e-23,95;UBERON:0006601,1.58e-23,95;UBERON:0002346,4.63e-23,64;UBERON:0003075,4.63e-23,64;UBERON:0007284,4.63e-23,64;UBERON:0000073,9.30e-23,54;UBERON:0001049,1.68e-20,52;UBERON:0005068,1.68e-20,52;UBERON:0006241,1.68e-20,52;UBERON:0007135,1.68e-20,52;UBERON:0002020,2.74e-19,34;UBERON:0010371,1.86e-18,73;UBERON:0000955,5.58e-16,47;UBERON:0006238,5.58e-16,47;UBERON:0002616,3.54e-15,46;UBERON:0003528,1.38e-14,29;UBERON:0002791,1.38e-14,29;UBERON:0001893,1.38e-14,29;UBERON:0003056,5.52e-14,49;UBERON:0003080,1.69e-13,40;UBERON:0002021,8.99e-13,10;UBERON:0000411,8.99e-13,10;UBERON:0001950,8.99e-13,10;UBERON:0002780,1.23e-12,39;UBERON:0001890,1.23e-12,39;UBERON:0006240,1.23e-12,39;UBERON:0010314,1.64e-12,92;UBERON:0002619,5.32e-09,17;UBERON:0002420,8.60e-09,8;UBERON:0007245,8.60e-09,8;UBERON:0010009,8.60e-09,8;UBERON:0010011,8.60e-09,8;UBERON:0000454,8.60e-09,8;UBERON:0003076,4.80e-08,12;UBERON:0003057,4.80e-08,12;UBERON:0000956,5.72e-08,21;UBERON:0001869,5.72e-08,21;UBERON:0000203,5.72e-08,21;UBERON:0002240,2.47e-07,6;UBERON:0005174,2.47e-07,6;UBERON:0001137,2.47e-07,6|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.274228867211478,0,2.8064285749853,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,1.01376931219515,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,7.08107613008592,4.7609188134483,6.33831403506179,0.338844532069132,0,6.74924787961049,10.8775299882367,9.2362414942993,2.39680088414724,2.30530983192933,0.311068836925433,0.270011876663381,0,19.7099179238624,10.8225585066291,0.244981598429908,0,0,25.3266526298594,21.9622221506523,30.4140935847362,5.27545150920775,6.95306091378313,5.73004707612436,27.9182999001381,21.9477417912355,20.4749652020926,22.9810296669461,15.9456282494995,11.5567656411686,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,3.36619248741323,0.445326417194474,1.04091196059682,0.304465478312141,0.230615497256059,0.150722640552623,0.587943535678524,0.628332956648377,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,1.17112318804619,1.25668024088073,0,0,0,0,21.12048015608,18.7575247155637,2.01046963380583,23.1186345855728,22.7586757023994,22.8566849015516,14.1149898868949,1.32391173005411,1.99051152976149,3.28539585963777,0.631325567659422,0,0.229902104433473,0.540186389416048,1.05493372485001,1.08858398642125,1.40925092313335,1.12442069471675,1.81092359517311,0,0,0,0.219195732427575,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,21.8701546506692,2.16099685996497,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0.795825888164603,0.974820435595601,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0.315270288212382,0,0.318909537314974,0.327726629431476,0,0.289298117163023,4.52373851817817,2.71952841909355,0.491764273019036,0.275936746304732,23.119284958242,18.0505997351993,0,0,3.15508219416257,1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| ||
|EntrezGene=263764 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8BGC9 | |||
|association_with_transcript=190bp_to_ENSMUST00000053355,NM_170597,uc007atm.1_5end | |||
|description=CAGE_peak_1_at_Creg2_5end | |||
|id=chr1:39707785..39707836,- | |||
|ontology_enrichment_celltype=CL:0000540!5.59e-09!33;CL:0000047!5.59e-09!33;CL:0000031!5.59e-09!33;CL:0000404!5.59e-09!33;CL:0000117!4.30e-08!23;CL:0000337!4.30e-08!23;CL:0000393!2.03e-07!39;CL:0000211!2.03e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.36e-13,33;CL:0000047,5.36e-13,33;CL:0000031,5.36e-13,33;CL:0000404,5.36e-13,33;CL:0000117,8.06e-12,23;CL:0000337,8.06e-12,23;CL:0000393,1.03e-10,39;CL:0000211,1.03e-10,39;CL:0002319,3.32e-10,43;CL:0000221,8.42e-10,44;CL:0000133,8.42e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.35e-19!102;UBERON:0000924!2.35e-19!102;UBERON:0006601!2.35e-19!102;UBERON:0001017!1.84e-18!73;UBERON:0005743!1.84e-18!73;UBERON:0000073!4.06e-18!75;UBERON:0001016!4.06e-18!75;UBERON:0002346!1.66e-16!71;UBERON:0003075!1.66e-16!71;UBERON:0007284!1.66e-16!71;UBERON:0000033!2.03e-13!63;UBERON:0001049!2.04e-13!52;UBERON:0005068!2.04e-13!52;UBERON:0006241!2.04e-13!52;UBERON:0007135!2.04e-13!52;UBERON:0000955!1.72e-12!50;UBERON:0006238!1.72e-12!50;UBERON:0002020!4.98e-12!34;UBERON:0002616!5.66e-12!49;UBERON:0003056!8.06e-11!49;UBERON:0003080!1.25e-09!40;UBERON:0002791!3.42e-09!29;UBERON:0003528!3.42e-09!29;UBERON:0001893!3.42e-09!29;UBERON:0002780!4.38e-09!39;UBERON:0001890!4.38e-09!39;UBERON:0006240!4.38e-09!39;UBERON:0002021!2.17e-08!10;UBERON:0000411!2.17e-08!10;UBERON:0001950!2.17e-08!10;UBERON:0007811!5.49e-08!86;UBERON:0000153!1.13e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.18e-29,73;UBERON:0001016,3.76e-28,75;UBERON:0004121,1.58e-23,95;UBERON:0000924,1.58e-23,95;UBERON:0006601,1.58e-23,95;UBERON:0002346,4.63e-23,64;UBERON:0003075,4.63e-23,64;UBERON:0007284,4.63e-23,64;UBERON:0000073,9.30e-23,54;UBERON:0001049,1.68e-20,52;UBERON:0005068,1.68e-20,52;UBERON:0006241,1.68e-20,52;UBERON:0007135,1.68e-20,52;UBERON:0002020,2.74e-19,34;UBERON:0010371,1.86e-18,73;UBERON:0000955,5.58e-16,47;UBERON:0006238,5.58e-16,47;UBERON:0002616,3.54e-15,46;UBERON:0003528,1.38e-14,29;UBERON:0002791,1.38e-14,29;UBERON:0001893,1.38e-14,29;UBERON:0003056,5.52e-14,49;UBERON:0003080,1.69e-13,40;UBERON:0002021,8.99e-13,10;UBERON:0000411,8.99e-13,10;UBERON:0001950,8.99e-13,10;UBERON:0002780,1.23e-12,39;UBERON:0001890,1.23e-12,39;UBERON:0006240,1.23e-12,39;UBERON:0010314,1.64e-12,92;UBERON:0002619,5.32e-09,17;UBERON:0002420,8.60e-09,8;UBERON:0007245,8.60e-09,8;UBERON:0010009,8.60e-09,8;UBERON:0010011,8.60e-09,8;UBERON:0000454,8.60e-09,8;UBERON:0003076,4.80e-08,12;UBERON:0003057,4.80e-08,12;UBERON:0000956,5.72e-08,21;UBERON:0001869,5.72e-08,21;UBERON:0000203,5.72e-08,21;UBERON:0002240,2.47e-07,6;UBERON:0005174,2.47e-07,6;UBERON:0001137,2.47e-07,6 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.274228867211478,0,2.8064285749853,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,1.01376931219515,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,7.08107613008592,4.7609188134483,6.33831403506179,0.338844532069132,0,6.74924787961049,10.8775299882367,9.2362414942993,2.39680088414724,2.30530983192933,0.311068836925433,0.270011876663381,0,19.7099179238624,10.8225585066291,0.244981598429908,0,0,25.3266526298594,21.9622221506523,30.4140935847362,5.27545150920775,6.95306091378313,5.73004707612436,27.9182999001381,21.9477417912355,20.4749652020926,22.9810296669461,15.9456282494995,11.5567656411686,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,3.36619248741323,0.445326417194474,1.04091196059682,0.304465478312141,0.230615497256059,0.150722640552623,0.587943535678524,0.628332956648377,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,1.17112318804619,1.25668024088073,0,0,0,0,21.12048015608,18.7575247155637,2.01046963380583,23.1186345855728,22.7586757023994,22.8566849015516,14.1149898868949,1.32391173005411,1.99051152976149,3.28539585963777,0.631325567659422,0,0.229902104433473,0.540186389416048,1.05493372485001,1.08858398642125,1.40925092313335,1.12442069471675,1.81092359517311,0,0,0,0.219195732427575,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,21.8701546506692,2.16099685996497,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0.795825888164603,0.974820435595601,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0.315270288212382,0,0.318909537314974,0.327726629431476,0,0.289298117163023,4.52373851817817,2.71952841909355,0.491764273019036,0.275936746304732,23.119284958242,18.0505997351993,0,0,3.15508219416257,1.56175497718655,2.15423397732799,0,0.222798674082394,0,1.61924280669958,2.04579100537918,2.76701444562566,10.2822821254978,0.99358059645788,0.534196811001766,0.488660878060728,1.31976098378028,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0.516856586336442,0,0,0.632073515871632,0,0,2.7235168460303,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.913394847343798,0,0.42366414172764,9.92377791247329,0,0.161464426695906,0.180938774784468,0.119372344003136,0.656563598980245,1.1659233465194,20.025932617135,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.540026704109006,0,0.655087691238533,0.404593039154462,0.330613822901344,0.785267825952089,0.259229946583586,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0.651021924219751,0.629156066554265,0,0,0,0.202725215290164,0.513554785824136,0.649604114888975,0.179026695667481,0.198681354781265,0.360586348559907,0.886137163047463,0.100966449948148,0.304827226619999,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0.386379188064381,0.563047426353546,1.46521299413812,1.2862102744744,5.01572104035363,23.1548255472997,23.0162618253588,25.2074025913335,17.0134650520251,22.6077231524312,28.7049681008086,20.2506750069542,23.4167025676595,23.5634052671786,24.8524949640874,0.207574695168353,0.798049746802062,0,0.243106717068294,1.04806581313991,1.47074806760011,0.666740183404846,1.03017528619447,0.962757628775446,0.505394423527595,2.28131369901216,1.69763707247469,1.03005658216871,1.02440243847791,1.55075766180156,0.952587382566147,0.927074607558844,0.77163688185482,0.824171801606613,0.735994600671987,1.37147700954166,1.06485483695602,0.476872379894642,0.145346416632329,1.69396884747595,1.35383372626682,0.182927972872773,1.05227884575137,0.679020569229309,0,1.42362021749009,0.788035859004508,0.409231043169689,1.08455788830176,0.964533054905707,0.999242311751784,0.233931608445408,0.214871054048298,1.3390183244819,1.76473135295612,0.695603506861264 | |||
|short_description=p1@Creg2 | |||
}} |
Revision as of 20:21, 13 September 2013
Short description: | p1@Creg2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Creg2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 190bp_to_ENSMUST00000053355, NM_170597, uc007atm.1_5end |
EntrezGene: | Creg2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.36e-13 | 33 |
neuronal stem cell | 5.36e-13 | 33 |
neuroblast | 5.36e-13 | 33 |
electrically signaling cell | 5.36e-13 | 33 |
CNS neuron (sensu Vertebrata) | 8.06e-12 | 23 |
neuroblast (sensu Vertebrata) | 8.06e-12 | 23 |
electrically responsive cell | 1.03e-10 | 39 |
electrically active cell | 1.03e-10 | 39 |
neural cell | 3.32e-10 | 43 |
ectodermal cell | 8.42e-10 | 44 |
neurectodermal cell | 8.42e-10 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.