FFCP PHASE1:Hg19::chr7:100201073..100201087,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=-415bp_to_ENST00000544873_5end|coexpression_cluster_id=C1641|description=CAGE_peak_2_at_ENST00000544873_5end|id=chr7:100201073..100201087,-|ontology_enrichment_celltype=CL:0000055!1.02e-35!180;CL:0000057!5.88e-24!75;CL:0000048!1.17e-14!430;CL:0000723!7.33e-14!436;CL:0000183!7.85e-14!59;CL:0000187!8.23e-14!54;CL:0000680!2.29e-13!57;CL:0000056!2.29e-13!57;CL:0000355!2.29e-13!57;CL:0000034!3.32e-13!444;CL:0000393!6.14e-12!60;CL:0000211!6.14e-12!60;CL:0002620!6.87e-11!23;CL:0000192!1.67e-09!42;CL:0000514!1.67e-09!42;CL:0000499!3.50e-09!27;CL:0002371!4.55e-09!591;CL:0002320!1.25e-08!365;CL:0000327!1.20e-07!14;CL:0002334!5.77e-07!12|ontology_enrichment_celltype_v019=CL:0000153;9.86e-15;9!CL:0000447;9.86e-15;9!CL:0000499;6.48e-14;28!CL:0000327;9.78e-11;15!CL:0000135;1.26e-09;3!CL:0000388;1.26e-09;3!CL:0000214;2.30e-09;3!CL:0000138;9.79e-08;6!CL:0002334;1.62e-07;12|ontology_enrichment_celltype_v019_2=CL:0000057,9.49e-16,76;CL:0000153,1.23e-14,9;CL:0000447,1.23e-14,9;CL:0000499,4.14e-14,28;CL:0002320,7.75e-13,361;CL:0000048,4.86e-11,427;CL:0000723,1.11e-10,433;CL:0000327,1.13e-10,15;CL:0000034,3.24e-10,441;CL:0000135,1.14e-09,3;CL:0000388,1.14e-09,3;CL:0000214,2.64e-09,3;CL:0000134,3.52e-09,354;CL:0000219,8.18e-08,386;CL:0000058,1.08e-07,6;CL:0000138,1.08e-07,6;CL:0002334,2.38e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!3.11e-15!83;UBERON:0002329!3.11e-15!83;UBERON:0003077!3.11e-15!83;UBERON:0003059!3.11e-15!83;UBERON:0007282!3.11e-15!83;UBERON:0009618!3.11e-15!83;UBERON:0007285!3.11e-15!83;UBERON:0004290!8.67e-14!70;UBERON:0002385!2.67e-13!63;UBERON:0001015!2.67e-13!63;UBERON:0000383!2.67e-13!63;UBERON:0001134!1.20e-12!61;UBERON:0002036!1.20e-12!61;UBERON:0003082!1.20e-12!61;UBERON:0000486!1.52e-12!82;UBERON:0002384!2.03e-09!375;UBERON:0005256!4.55e-09!143;UBERON:0002199!2.69e-07!45;UBERON:0002416!2.69e-07!45;UBERON:0000479!6.78e-07!787|ontology_enrichment_uberon_v019=UBERON:0004905;3.11e-16;8!UBERON:0000982;3.11e-16;8!UBERON:0004770;3.11e-16;8!UBERON:0001013;5.03e-11;14!UBERON:0000075;5.91e-10;16!UBERON:0007846;1.26e-09;3!UBERON:0000043;1.26e-09;3!UBERON:0007845;1.26e-09;3!UBERON:0006915;2.30e-09;3!UBERON:0007616;2.30e-09;3!UBERON:0002217;2.30e-09;3!UBERON:0002018;2.30e-09;3!UBERON:0001434;2.38e-09;36!UBERON:0011135;7.45e-09;5!UBERON:0002216;7.45e-09;5!UBERON:0011134;7.45e-09;5!UBERON:0002209;7.45e-09;5!UBERON:0002213;7.45e-09;5!UBERON:0007844;7.45e-09;5!UBERON:0011138;7.45e-09;5!UBERON:0001130;7.45e-09;5!UBERON:0001066;7.45e-09;5!UBERON:0001468;7.45e-09;5!UBERON:0002072;8.36e-09;5!UBERON:0002384;5.09e-07;198|ontology_enrichment_uberon_v019_2=UBERON:0004905,3.89e-16,8;UBERON:0000982,3.89e-16,8;UBERON:0004770,3.89e-16,8;UBERON:0002384,4.17e-12,371;UBERON:0001013,2.65e-11,14;UBERON:0000075,5.33e-10,16;UBERON:0007846,1.14e-09,3;UBERON:0000043,1.14e-09,3;UBERON:0007845,1.14e-09,3;UBERON:0006915,2.64e-09,3;UBERON:0007616,2.64e-09,3;UBERON:0002217,2.64e-09,3;UBERON:0002018,2.64e-09,3;UBERON:0002072,7.55e-09,5;UBERON:0011135,8.21e-09,5;UBERON:0002216,8.21e-09,5;UBERON:0011134,8.21e-09,5;UBERON:0002209,8.21e-09,5;UBERON:0002213,8.21e-09,5;UBERON:0005856,8.21e-09,5;UBERON:0005866,8.21e-09,5;UBERON:0005863,8.21e-09,5;UBERON:0007844,8.21e-09,5;UBERON:0011138,8.21e-09,5;UBERON:0001130,8.21e-09,5;UBERON:0001066,8.21e-09,5;UBERON:0001468,8.21e-09,5;UBERON:0002199,4.13e-07,46;UBERON:0002416,4.13e-07,46;UBERON:0003102,6.93e-07,99;UBERON:0011137,8.15e-07,14|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,0,0,1.74467704820074,0,1.89515962028049,1.30592814099919,0.245733936501509,0,0,0.263766978228454,1.48519623552056,1.65698687863958,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0.612002073732759,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,2.53007406669196,2.50668955317945,2.31754430337318,0,1.45990461090791,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.633152558322899,0.529636723252875,2.0078563452417,1.41867352879343,0,0,0.49333509683432,0.622422070799533,0,0.163461903113459,0.605429710579726,3.45705554687999,0.70296429550139,1.5608003841516,0,1.19558944441441,0.352303495931295,0.161872944368132,0,0,0.737005903870608,0.206651562351531,1.18800285728205,1.7308685049499,0,0.718618141816238,0,0,0,1.75591048352335,3.0648779579902,3.45547535485173,0.226864366320042,0.89694817844431,0.85422955527427,0.847727604638247,2.70081986475962,0.309157587715317,0,0.930584281657949,2.86919764810153,0.292311015483596,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-415bp_to_ENST00000544873_5end | |||
|coexpression_cluster_id=C1641 | |||
|description=CAGE_peak_2_at_ENST00000544873_5end | |||
|id=chr7:100201073..100201087,- | |||
|ontology_enrichment_celltype=CL:0000055!1.02e-35!180;CL:0000057!5.88e-24!75;CL:0000048!1.17e-14!430;CL:0000723!7.33e-14!436;CL:0000183!7.85e-14!59;CL:0000187!8.23e-14!54;CL:0000680!2.29e-13!57;CL:0000056!2.29e-13!57;CL:0000355!2.29e-13!57;CL:0000034!3.32e-13!444;CL:0000393!6.14e-12!60;CL:0000211!6.14e-12!60;CL:0002620!6.87e-11!23;CL:0000192!1.67e-09!42;CL:0000514!1.67e-09!42;CL:0000499!3.50e-09!27;CL:0002371!4.55e-09!591;CL:0002320!1.25e-08!365;CL:0000327!1.20e-07!14;CL:0002334!5.77e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000153;9.86e-15;9!CL:0000447;9.86e-15;9!CL:0000499;6.48e-14;28!CL:0000327;9.78e-11;15!CL:0000135;1.26e-09;3!CL:0000388;1.26e-09;3!CL:0000214;2.30e-09;3!CL:0000138;9.79e-08;6!CL:0002334;1.62e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.49e-16,76;CL:0000153,1.23e-14,9;CL:0000447,1.23e-14,9;CL:0000499,4.14e-14,28;CL:0002320,7.75e-13,361;CL:0000048,4.86e-11,427;CL:0000723,1.11e-10,433;CL:0000327,1.13e-10,15;CL:0000034,3.24e-10,441;CL:0000135,1.14e-09,3;CL:0000388,1.14e-09,3;CL:0000214,2.64e-09,3;CL:0000134,3.52e-09,354;CL:0000219,8.18e-08,386;CL:0000058,1.08e-07,6;CL:0000138,1.08e-07,6;CL:0002334,2.38e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.11e-15!83;UBERON:0002329!3.11e-15!83;UBERON:0003077!3.11e-15!83;UBERON:0003059!3.11e-15!83;UBERON:0007282!3.11e-15!83;UBERON:0009618!3.11e-15!83;UBERON:0007285!3.11e-15!83;UBERON:0004290!8.67e-14!70;UBERON:0002385!2.67e-13!63;UBERON:0001015!2.67e-13!63;UBERON:0000383!2.67e-13!63;UBERON:0001134!1.20e-12!61;UBERON:0002036!1.20e-12!61;UBERON:0003082!1.20e-12!61;UBERON:0000486!1.52e-12!82;UBERON:0002384!2.03e-09!375;UBERON:0005256!4.55e-09!143;UBERON:0002199!2.69e-07!45;UBERON:0002416!2.69e-07!45;UBERON:0000479!6.78e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;3.11e-16;8!UBERON:0000982;3.11e-16;8!UBERON:0004770;3.11e-16;8!UBERON:0001013;5.03e-11;14!UBERON:0000075;5.91e-10;16!UBERON:0007846;1.26e-09;3!UBERON:0000043;1.26e-09;3!UBERON:0007845;1.26e-09;3!UBERON:0006915;2.30e-09;3!UBERON:0007616;2.30e-09;3!UBERON:0002217;2.30e-09;3!UBERON:0002018;2.30e-09;3!UBERON:0001434;2.38e-09;36!UBERON:0011135;7.45e-09;5!UBERON:0002216;7.45e-09;5!UBERON:0011134;7.45e-09;5!UBERON:0002209;7.45e-09;5!UBERON:0002213;7.45e-09;5!UBERON:0007844;7.45e-09;5!UBERON:0011138;7.45e-09;5!UBERON:0001130;7.45e-09;5!UBERON:0001066;7.45e-09;5!UBERON:0001468;7.45e-09;5!UBERON:0002072;8.36e-09;5!UBERON:0002384;5.09e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,3.89e-16,8;UBERON:0000982,3.89e-16,8;UBERON:0004770,3.89e-16,8;UBERON:0002384,4.17e-12,371;UBERON:0001013,2.65e-11,14;UBERON:0000075,5.33e-10,16;UBERON:0007846,1.14e-09,3;UBERON:0000043,1.14e-09,3;UBERON:0007845,1.14e-09,3;UBERON:0006915,2.64e-09,3;UBERON:0007616,2.64e-09,3;UBERON:0002217,2.64e-09,3;UBERON:0002018,2.64e-09,3;UBERON:0002072,7.55e-09,5;UBERON:0011135,8.21e-09,5;UBERON:0002216,8.21e-09,5;UBERON:0011134,8.21e-09,5;UBERON:0002209,8.21e-09,5;UBERON:0002213,8.21e-09,5;UBERON:0005856,8.21e-09,5;UBERON:0005866,8.21e-09,5;UBERON:0005863,8.21e-09,5;UBERON:0007844,8.21e-09,5;UBERON:0011138,8.21e-09,5;UBERON:0001130,8.21e-09,5;UBERON:0001066,8.21e-09,5;UBERON:0001468,8.21e-09,5;UBERON:0002199,4.13e-07,46;UBERON:0002416,4.13e-07,46;UBERON:0003102,6.93e-07,99;UBERON:0011137,8.15e-07,14 | |||
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| |||
|short_description=p2@ENST00000544873 | |||
}} |
Revision as of 22:15, 13 September 2013
Short description: | p2@ENST00000544873 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000544873_5end |
Coexpression cluster: | C1641_Mesenchymal_Nucleus_Fibroblast_tenocyte_Pericytes_normal_Smooth |
Association with transcript: | -415bp_to_ENST00000544873_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.49e-16 | 76 |
GAG secreting cell | 1.23e-14 | 9 |
carbohydrate secreting cell | 1.23e-14 | 9 |
stromal cell | 4.14e-14 | 28 |
connective tissue cell | 7.75e-13 | 361 |
multi fate stem cell | 4.86e-11 | 427 |
somatic stem cell | 1.11e-10 | 433 |
extracellular matrix secreting cell | 1.13e-10 | 15 |
stem cell | 3.24e-10 | 441 |
fibrocyte | 1.14e-09 | 3 |
tendon cell | 1.14e-09 | 3 |
synovial cell | 2.64e-09 | 3 |
mesenchymal cell | 3.52e-09 | 354 |
motile cell | 8.18e-08 | 386 |
chondroblast | 1.08e-07 | 6 |
chondrocyte | 1.08e-07 | 6 |
preadipocyte | 2.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
articulation | 3.89e-16 | 8 |
skeletal joint | 3.89e-16 | 8 |
articular system | 3.89e-16 | 8 |
connective tissue | 4.17e-12 | 371 |
adipose tissue | 2.65e-11 | 14 |
subdivision of skeletal system | 5.33e-10 | 16 |
dense regular connective tissue | 1.14e-09 | 3 |
tendon | 1.14e-09 | 3 |
regular connective tissue | 1.14e-09 | 3 |
stratified squamous epithelium | 2.64e-09 | 3 |
layer of synovial tissue | 2.64e-09 | 3 |
synovial joint | 2.64e-09 | 3 |
synovial membrane of synovial joint | 2.64e-09 | 3 |
hypodermis | 7.55e-09 | 5 |
intervertebral cartilage | 8.21e-09 | 5 |
symphysis | 8.21e-09 | 5 |
nonsynovial joint | 8.21e-09 | 5 |
fibrous joint | 8.21e-09 | 5 |
cartilaginous joint | 8.21e-09 | 5 |
developing mesenchymal condensation | 8.21e-09 | 5 |
pre-cartilage condensation | 8.21e-09 | 5 |
cartilaginous condensation | 8.21e-09 | 5 |
cartilage element | 8.21e-09 | 5 |
post-cranial axial skeletal system | 8.21e-09 | 5 |
vertebral column | 8.21e-09 | 5 |
intervertebral disk | 8.21e-09 | 5 |
intervertebral joint | 8.21e-09 | 5 |
integument | 4.13e-07 | 46 |
integumental system | 4.13e-07 | 46 |
surface structure | 6.93e-07 | 99 |
axial skeletal system | 8.15e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.