FFCP PHASE1:Hg19::chr7:14028488..14028516,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2115 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3490 | |||
|TSSclassifier=S | |||
|UniProt=B5MCT2 | |||
|association_with_transcript=0bp_to_ENST00000405358_5end | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_2_at_ETV1_5end | |||
|id=chr7:14028488..14028516,- | |||
|ontology_enrichment_celltype=CL:0000055!1.52e-12!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p2@ETV1 | |||
}} |
Revision as of 23:34, 13 September 2013
Short description: | p2@ETV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ETV1_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | 0bp_to_ENST00000405358_5end |
EntrezGene: | ETV1 |
HGNC: | 3490 |
UniProt: | B5MCT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.52e-15 | 171 |
ectoderm | 2.52e-15 | 171 |
presumptive ectoderm | 2.52e-15 | 171 |
central nervous system | 3.80e-15 | 81 |
nervous system | 1.37e-14 | 89 |
structure with developmental contribution from neural crest | 1.80e-14 | 132 |
regional part of nervous system | 3.56e-12 | 53 |
regional part of brain | 3.56e-12 | 53 |
neural plate | 4.71e-12 | 82 |
presumptive neural plate | 4.71e-12 | 82 |
organ system subdivision | 5.04e-12 | 223 |
neural tube | 6.46e-12 | 56 |
neural rod | 6.46e-12 | 56 |
future spinal cord | 6.46e-12 | 56 |
neural keel | 6.46e-12 | 56 |
brain | 1.35e-11 | 68 |
future brain | 1.35e-11 | 68 |
neurectoderm | 6.95e-11 | 86 |
ecto-epithelium | 1.22e-09 | 104 |
pre-chordal neural plate | 2.83e-09 | 61 |
regional part of forebrain | 5.19e-09 | 41 |
forebrain | 5.19e-09 | 41 |
anterior neural tube | 5.19e-09 | 41 |
future forebrain | 5.19e-09 | 41 |
neocortex | 2.47e-08 | 20 |
cerebral hemisphere | 3.60e-08 | 32 |
telencephalon | 4.07e-08 | 34 |
regional part of cerebral cortex | 4.27e-08 | 22 |
adult organism | 5.00e-08 | 114 |
regional part of telencephalon | 3.40e-07 | 32 |
brain grey matter | 3.69e-07 | 34 |
gray matter | 3.69e-07 | 34 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.