FFCP PHASE1:Mm9::chr2:28477422..28477433,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14582|HGNC=|UniProt=O70237|association_with_transcript=31bp_to_ENSMUST00000028156_5end|description=CAGE_peak_2_at_Gfi1b_5end|id=chr2:28477422..28477433,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000682,1.12e-13,3;CL:0000239,1.30e-11,6;CL:0000677,1.30e-11,6;CL:0000584,1.30e-11,6;CL:0000075,5.70e-10,7;CL:0002563,9.01e-08,9;CL:0002251,9.01e-08,9;CL:0000066,1.23e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!7.89e-09!6;UBERON:0004457!7.89e-09!6;UBERON:0000042!7.89e-09!6;UBERON:0004854!7.89e-09!6;UBERON:0009034!7.89e-09!6;UBERON:0002095!7.89e-09!6;UBERON:0004782!7.89e-09!6;UBERON:0003281!7.89e-09!6;UBERON:0009664!7.89e-09!6;UBERON:0002296!7.89e-09!6;UBERON:0005602!7.89e-09!6;UBERON:0001179!7.89e-09!6;UBERON:0006293!7.89e-09!6;UBERON:0004923!2.41e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0004923,2.09e-12,24;UBERON:0000344,1.47e-09,15;UBERON:0001242,5.25e-08,13;UBERON:0001262,5.25e-08,13;UBERON:0004786,5.25e-08,13;UBERON:0003350,9.01e-08,9;UBERON:0004808,9.01e-08,9;UBERON:0001277,9.01e-08,9|phase1_expression=0,2.09385244583617,3.63999391511629,0,0,4.19698179779725,1.86890112476421,0,0,0,0,0,0,0,0.666219523631325,0.809901069559304,1.39912375625629,0,0.274228867211478,0,0,3.77305614563364,1.56719873483361,1.27993938234725,0.68822784320151,4.59385571292016,1.7230479846363,5.17130958446134,0,0,1.99557459589774,2.54012269383853,3.07532393792285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,2.65383165584962,0.161766849947409,0,0.969750506270444,0,0,0,0,0.718890747035522,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0.414251545071004,0.469052119962192,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,1.66845105716094,0.786235980452812,1.34917267430912,1.01430060694251,1.20588579876208,0.50925170356284,0,0.810676133875177,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19609616558497,0.412773735926445,0.555583582109135,1.69531611304222,1.23024804948923,0.915112692826091,0.339956859987711,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.526139422875686,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0.231867835620421|short_description=p2@Gfi1b}} | ||
|EntrezGene=14582 | |||
|HGNC= | |||
|UniProt=O70237 | |||
|association_with_transcript=31bp_to_ENSMUST00000028156_5end | |||
|description=CAGE_peak_2_at_Gfi1b_5end | |||
|id=chr2:28477422..28477433,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.12e-13,3;CL:0000239,1.30e-11,6;CL:0000677,1.30e-11,6;CL:0000584,1.30e-11,6;CL:0000075,5.70e-10,7;CL:0002563,9.01e-08,9;CL:0002251,9.01e-08,9;CL:0000066,1.23e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!7.89e-09!6;UBERON:0004457!7.89e-09!6;UBERON:0000042!7.89e-09!6;UBERON:0004854!7.89e-09!6;UBERON:0009034!7.89e-09!6;UBERON:0002095!7.89e-09!6;UBERON:0004782!7.89e-09!6;UBERON:0003281!7.89e-09!6;UBERON:0009664!7.89e-09!6;UBERON:0002296!7.89e-09!6;UBERON:0005602!7.89e-09!6;UBERON:0001179!7.89e-09!6;UBERON:0006293!7.89e-09!6;UBERON:0004923!2.41e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,2.09e-12,24;UBERON:0000344,1.47e-09,15;UBERON:0001242,5.25e-08,13;UBERON:0001262,5.25e-08,13;UBERON:0004786,5.25e-08,13;UBERON:0003350,9.01e-08,9;UBERON:0004808,9.01e-08,9;UBERON:0001277,9.01e-08,9 | |||
|phase1_expression=0,2.09385244583617,3.63999391511629,0,0,4.19698179779725,1.86890112476421,0,0,0,0,0,0,0,0.666219523631325,0.809901069559304,1.39912375625629,0,0.274228867211478,0,0,3.77305614563364,1.56719873483361,1.27993938234725,0.68822784320151,4.59385571292016,1.7230479846363,5.17130958446134,0,0,1.99557459589774,2.54012269383853,3.07532393792285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,2.65383165584962,0.161766849947409,0,0.969750506270444,0,0,0,0,0.718890747035522,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0.414251545071004,0.469052119962192,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,1.66845105716094,0.786235980452812,1.34917267430912,1.01430060694251,1.20588579876208,0.50925170356284,0,0.810676133875177,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19609616558497,0.412773735926445,0.555583582109135,1.69531611304222,1.23024804948923,0.915112692826091,0.339956859987711,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.526139422875686,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p2@Gfi1b | |||
}} |
Revision as of 23:37, 13 September 2013
Short description: | p2@Gfi1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gfi1b_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENSMUST00000028156_5end |
EntrezGene: | Gfi1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.12e-13 | 3 |
brush border epithelial cell | 1.30e-11 | 6 |
gut absorptive cell | 1.30e-11 | 6 |
enterocyte | 1.30e-11 | 6 |
columnar/cuboidal epithelial cell | 5.70e-10 | 7 |
intestinal epithelial cell | 9.01e-08 | 9 |
epithelial cell of alimentary canal | 9.01e-08 | 9 |
epithelial cell | 1.23e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 2.09e-12 | 24 |
mucosa | 1.47e-09 | 15 |
intestinal mucosa | 5.25e-08 | 13 |
wall of intestine | 5.25e-08 | 13 |
gastrointestinal system mucosa | 5.25e-08 | 13 |
epithelium of mucosa | 9.01e-08 | 9 |
gastrointestinal system epithelium | 9.01e-08 | 9 |
intestinal epithelium | 9.01e-08 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.