FFCP PHASE1:Hg19::chr7:23145347..23145358,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55975|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15646|TSSclassifier=S|UniProt=F5H7Q0,F5H2Q9,A8K364,Q8IXQ5|association_with_transcript=0bp_to_ENST00000322231,ENST00000536369,ENST00000538858,NM_001031710,NM_001172428,NR_033328,NR_033329,uc003svp.2,uc003svq.2,uc003svr.3,uc003svs.3,uc011jys.1,uc011jyt.1_5end|description=CAGE_peak_3_at_KLHL7_5end|id=chr7:23145347..23145358,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000540;1.93e-18;6!CL:0000404;1.93e-18;6!CL:0000037;5.58e-08;1!CL:0001024;5.58e-08;1|ontology_enrichment_celltype_v019_2=CL:0000047,4.24e-21,8;CL:0000540,2.12e-18,6;CL:0000031,2.12e-18,6;CL:0000404,2.12e-18,6;CL:0001024,6.19e-08,1|ontology_enrichment_development_v019=CL:0000031;1.93e-18;6!UBERON:0010227;5.58e-08;1!UBERON:0009117;8.63e-07;10!UBERON:0005564;8.63e-07;10|ontology_enrichment_disease=DOID:162!1.69e-07!235;DOID:14566!2.23e-07!239|ontology_enrichment_disease_v019=DOID:3151;5.58e-08;1!DOID:3149;5.58e-08;1|ontology_enrichment_disease_v019_2=DOID:3151,1.06e-07,1;DOID:3149,1.06e-07,1|ontology_enrichment_uberon=UBERON:0001017!4.14e-12!82;UBERON:0005743!8.41e-12!86;UBERON:0000073!1.15e-11!94;UBERON:0001016!1.15e-11!94;UBERON:0000955!3.73e-08!69;UBERON:0006238!3.73e-08!69;UBERON:0000924!8.00e-07!173;UBERON:0006601!8.00e-07!173;UBERON:0004121!9.50e-07!169|ontology_enrichment_uberon_v019=UBERON:0002079;5.58e-08;1!UBERON:0003112;5.58e-08;1!UBERON:0011158;5.58e-08;1!UBERON:0003128;5.58e-08;1!UBERON:0001703;5.58e-08;1!UBERON:0002241;5.58e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0002079,3.34e-08,1;UBERON:0003112,6.63e-08,1;UBERON:0011158,6.63e-08,1;UBERON:0003128,6.63e-08,1;UBERON:0001703,6.63e-08,1;UBERON:0002241,6.63e-08,1;UBERON:0004761,6.63e-08,1;UBERON:0009617,6.63e-08,1|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.547497700291537,0.251085279189606,0.458480434487708,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0.46480320348181,0,1.17440175733939,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0.393419540227666,0,0.205601498999509,0.334372990781356,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0.552700035571697,0,0,0,0,0.226618685395132,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,1.34140171940727,0.255725123687061,0,0,0.144846518960824,0,0,0.283604451492204,0.443458794925128,0.175669571386252,2.75056058545197,0,0,0.649094787309367,0,0.26591592103773,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0.17859945656816,0.44905874525234,0.112611480483322,0,0,0.183201743930407,0,3.87780264148325,0,0.496971951695318,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0.323745888736263,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.340296549480063,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0.389748020644795,0,0.276149695926898,0,0,0.201504196455281,0,0.386521706326594,0.545492241181669,0,0.609868530647977,0.927708378250397,0.232387885739037,0.932949495138334,1.7662459561294,0.72995471815166,1.56449532329816,0,0,0.464367928031979,0,0.354920400119532,0.337169380156203,0.241011029883482,0.220587945464788,0.653638332277218,0.237270619111097,0.404493924480493,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.329250856225877,0,0.100528972411631,0.370353780634118,0,0,0,0.231860809950154,0.117408694235822,0.144366447761074,0.925971025153221,0.190254152234598,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0.358234090811393,0.290633938513962,0,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.387815147273333,0,0,0.797814349754612,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0.710783897485092,0.791951872933429,0,0.871533458600294,0.099972991182057,0,0.502257091432126,0,0.718874566474748,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0,0.256686072559497,0.254094624222463,1.30139853857622,0.773288812777695,1.00509759200609,0.637938751653163,0,0,0,0.49076596687656,1.00034104211935,0,0.415941723061614,0.178428988797162,0,0.117141414992713,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0.496215615637554,0,0.280660094433074,0.384417447767103,1.02341449813341,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.362578348774867,0.601519410909855,0.184161977871793,0,0.364182336013434,0.393373244878272,0.451199612907412,0.616122696835318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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55975 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15646 | |||
|TSSclassifier=S | |||
|UniProt=F5H7Q0,F5H2Q9,A8K364,Q8IXQ5 | |||
|association_with_transcript=0bp_to_ENST00000322231,ENST00000536369,ENST00000538858,NM_001031710,NM_001172428,NR_033328,NR_033329,uc003svp.2,uc003svq.2,uc003svr.3,uc003svs.3,uc011jys.1,uc011jyt.1_5end | |||
|description=CAGE_peak_3_at_KLHL7_5end | |||
|id=chr7:23145347..23145358,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.93e-18;6!CL:0000404;1.93e-18;6!CL:0000037;5.58e-08;1!CL:0001024;5.58e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.24e-21,8;CL:0000540,2.12e-18,6;CL:0000031,2.12e-18,6;CL:0000404,2.12e-18,6;CL:0001024,6.19e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000031;1.93e-18;6!UBERON:0010227;5.58e-08;1!UBERON:0009117;8.63e-07;10!UBERON:0005564;8.63e-07;10 | |||
|ontology_enrichment_disease=DOID:162!1.69e-07!235;DOID:14566!2.23e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3151;5.58e-08;1!DOID:3149;5.58e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.06e-07,1;DOID:3149,1.06e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.14e-12!82;UBERON:0005743!8.41e-12!86;UBERON:0000073!1.15e-11!94;UBERON:0001016!1.15e-11!94;UBERON:0000955!3.73e-08!69;UBERON:0006238!3.73e-08!69;UBERON:0000924!8.00e-07!173;UBERON:0006601!8.00e-07!173;UBERON:0004121!9.50e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;5.58e-08;1!UBERON:0003112;5.58e-08;1!UBERON:0011158;5.58e-08;1!UBERON:0003128;5.58e-08;1!UBERON:0001703;5.58e-08;1!UBERON:0002241;5.58e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,3.34e-08,1;UBERON:0003112,6.63e-08,1;UBERON:0011158,6.63e-08,1;UBERON:0003128,6.63e-08,1;UBERON:0001703,6.63e-08,1;UBERON:0002241,6.63e-08,1;UBERON:0004761,6.63e-08,1;UBERON:0009617,6.63e-08,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.547497700291537,0.251085279189606,0.458480434487708,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0.46480320348181,0,1.17440175733939,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0.393419540227666,0,0.205601498999509,0.334372990781356,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0.552700035571697,0,0,0,0,0.226618685395132,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,1.34140171940727,0.255725123687061,0,0,0.144846518960824,0,0,0.283604451492204,0.443458794925128,0.175669571386252,2.75056058545197,0,0,0.649094787309367,0,0.26591592103773,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0.17859945656816,0.44905874525234,0.112611480483322,0,0,0.183201743930407,0,3.87780264148325,0,0.496971951695318,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0.323745888736263,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.340296549480063,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0.389748020644795,0,0.276149695926898,0,0,0.201504196455281,0,0.386521706326594,0.545492241181669,0,0.609868530647977,0.927708378250397,0.232387885739037,0.932949495138334,1.7662459561294,0.72995471815166,1.56449532329816,0,0,0.464367928031979,0,0.354920400119532,0.337169380156203,0.241011029883482,0.220587945464788,0.653638332277218,0.237270619111097,0.404493924480493,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.329250856225877,0,0.100528972411631,0.370353780634118,0,0,0,0.231860809950154,0.117408694235822,0.144366447761074,0.925971025153221,0.190254152234598,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0.358234090811393,0.290633938513962,0,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.387815147273333,0,0,0.797814349754612,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0.710783897485092,0.791951872933429,0,0.871533458600294,0.099972991182057,0,0.502257091432126,0,0.718874566474748,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0,0.256686072559497,0.254094624222463,1.30139853857622,0.773288812777695,1.00509759200609,0.637938751653163,0,0,0,0.49076596687656,1.00034104211935,0,0.415941723061614,0.178428988797162,0,0.117141414992713,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0.496215615637554,0,0.280660094433074,0.384417447767103,1.02341449813341,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.362578348774867,0.601519410909855,0.184161977871793,0,0.364182336013434,0.393373244878272,0.451199612907412,0.616122696835318,0,0,0.316654886678627,0,0,0.431831832204279,0,0,0,0,0,0.223874754722178,0.657779629937804,0,0,0,0.325378394664303,0,0.366277859273374,0.330037999682352,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.413509717453592,0.214840489736547,0.290033387828457,0.340906509664404,0.267096106940212,0.165284915360978,0,0.765676274967505,0.10115778085555,0.929691098594572,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0,0.235624804691373,0.404364963146632,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0.281695602532241,0.430234056612155,0.196498082026242,0,0,0,0,0.379473173765715,0,0.192444225451024,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0.371606350251437,0.577076851905779,0.640276590135727,0.478278818186467,0.59873811429845,0.191505370132367,0.423347165447766,0,0,0,0.313359791546046,0,0.169291777801603,0,0.403599414382095,0,0,1.22896305723383,0.223676107892416,0.166849141711909,0,0.556812347790485,1.23087398947712,0.540911356951966,0.33307196799782,0,0.18714054040822,0,0.242721043499027,0.334330152832435,0,0,0.296964680832639,0,0,0.281338832821026,0,0,0.211125408127993,0,0,0.251932747854276,0.102268682502155,0.246169610922139,0.311039587661807,0.179736702294654,0,0,0.394573622547734,0,0,0.969332746095218,0.649376687132959,1.99613798001194,0,0.349839999984783,0,0.1137934482855,0.254253650292766,0.709163045303809,1.03423011972439,0.874813840149763,0.347249989866585,0,0.241192877250816,0,0.663475559587348,0.295547618953547,0.438770794307945,0.10893846351899,0.139423744278603,0.230850775511391,0.113942055847001,0.23056390438806,0,0.977826347298073,0,0.549585560411174,0,1.02193298195737,0.156980256395025,0.166211681900156,0.451191321234361,0.588187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| |||
|short_description=p3@KLHL7 | |||
}} |
Revision as of 00:33, 14 September 2013
Short description: | p3@KLHL7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_KLHL7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000322231, ENST00000536369, ENST00000538858, NM_001031710, NM_001172428, NR_033328, NR_033329, uc003svp.2, uc003svq.2, uc003svr.3, uc003svs.3, uc011jys.1, uc011jyt.1_5end |
EntrezGene: | KLHL7 |
HGNC: | 15646 |
UniProt: | F5H7Q0F5H2Q9A8K364Q8IXQ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.24e-21 | 8 |
neuron | 2.12e-18 | 6 |
neuroblast | 2.12e-18 | 6 |
electrically signaling cell | 2.12e-18 | 6 |
CD34-positive, CD38-negative hematopoietic stem cell | 6.19e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 3.34e-08 | 1 |
olfactory region | 6.63e-08 | 1 |
primary subdivision of skull | 6.63e-08 | 1 |
cranium | 6.63e-08 | 1 |
neurocranium | 6.63e-08 | 1 |
chondrocranium | 6.63e-08 | 1 |
cartilaginous neurocranium | 6.63e-08 | 1 |
head paraxial mesoderm | 6.63e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.06e-07 | 1 |
keratoacanthoma | 1.06e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.