FFCP PHASE1:Hg19::chr7:32111009..32111055,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5137|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8776|TSSclassifier=S|UniProt=Q14123,F8W905|association_with_transcript=0bp_to_ENST00000321453,ENST00000396184,ENST00000396189,NM_005020_5end|coexpression_cluster_id=C2893|description=CAGE_peak_5_at_PDE1C_5end|id=chr7:32111009..32111055,-|ontology_enrichment_celltype=CL:0000057!4.08e-09!75;CL:0000055!1.21e-07!180;CL:0002620!4.40e-07!23|ontology_enrichment_celltype_v019=CL:0002620;1.88e-08;23!CL:0002579;5.11e-07;3!CL:0002580;6.86e-07;3|ontology_enrichment_celltype_v019_2=CL:0000057,1.48e-08,76;CL:0002620,1.85e-08,23;CL:0002579,4.59e-07,3;CL:0002580,9.31e-07,3|ontology_enrichment_development_v019=UBERON:0006601;5.42e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.05e-30!57;UBERON:0005068!1.05e-30!57;UBERON:0006241!1.05e-30!57;UBERON:0007135!1.05e-30!57;UBERON:0000955!3.83e-27!69;UBERON:0006238!3.83e-27!69;UBERON:0002616!4.53e-27!59;UBERON:0001017!8.47e-25!82;UBERON:0002020!1.56e-24!34;UBERON:0003528!1.56e-24!34;UBERON:0001893!1.90e-24!34;UBERON:0005743!4.15e-24!86;UBERON:0002791!1.45e-23!33;UBERON:0002780!1.90e-23!41;UBERON:0001890!1.90e-23!41;UBERON:0006240!1.90e-23!41;UBERON:0003080!1.30e-22!42;UBERON:0000073!3.30e-22!94;UBERON:0001016!3.30e-22!94;UBERON:0001869!3.50e-22!32;UBERON:0007023!7.27e-18!115;UBERON:0003075!6.15e-17!86;UBERON:0007284!6.15e-17!86;UBERON:0000956!7.69e-16!25;UBERON:0000203!7.69e-16!25;UBERON:0002346!1.65e-15!90;UBERON:0000033!6.39e-14!123;UBERON:0003056!3.27e-13!61;UBERON:0002619!3.36e-13!22;UBERON:0000153!1.69e-12!129;UBERON:0007811!1.69e-12!129;UBERON:0001950!2.01e-11!20;UBERON:0002308!1.42e-10!9;UBERON:0000125!1.42e-10!9;UBERON:0004121!1.83e-10!169;UBERON:0000924!8.02e-10!173;UBERON:0006601!8.02e-10!173;UBERON:0000475!1.72e-09!365;UBERON:0003076!3.55e-09!15;UBERON:0003057!3.55e-09!15;UBERON:0000025!1.25e-08!194;UBERON:0009663!1.98e-08!7;UBERON:0004733!3.61e-08!12;UBERON:0002028!3.61e-08!12;UBERON:0007277!3.61e-08!12;UBERON:0002420!3.74e-08!9;UBERON:0007245!3.74e-08!9;UBERON:0010009!3.74e-08!9;UBERON:0010011!3.74e-08!9;UBERON:0000454!3.74e-08!9;UBERON:0002298!1.38e-07!8;UBERON:0004732!2.49e-07!13|ontology_enrichment_uberon_v019=UBERON:0001893;3.88e-32;34!UBERON:0003528;7.70e-31;34!UBERON:0002020;7.70e-31;34!UBERON:0002791;4.52e-30;32!UBERON:0001869;1.13e-29;32!UBERON:0002780;5.00e-25;41!UBERON:0001890;5.00e-25;41!UBERON:0000956;5.05e-25;25!UBERON:0000203;5.05e-25;25!UBERON:0000073;1.81e-23;53!UBERON:0002616;1.81e-23;53!UBERON:0002619;1.71e-20;22!UBERON:0001950;1.64e-17;20!UBERON:0000125;6.21e-14;9!UBERON:0002308;6.21e-14;9!UBERON:0000955;1.37e-13;68!UBERON:0001017;1.62e-12;75!UBERON:0002298;4.53e-12;6!UBERON:0001016;9.29e-11;83!UBERON:0002420;1.75e-10;9!UBERON:0007245;1.75e-10;9!UBERON:0010009;1.75e-10;9!UBERON:0010011;1.75e-10;9!UBERON:0000454;1.75e-10;9!UBERON:0009663;2.43e-10;7!UBERON:0004457;1.12e-09;9!UBERON:0000042;1.12e-09;9!UBERON:0003688;4.60e-08;6!UBERON:0002358;4.60e-08;6!UBERON:0003684;4.60e-08;6!UBERON:0001178;4.60e-08;6!UBERON:0000200;7.81e-08;6!UBERON:0004733;1.43e-07;12!UBERON:0002028;1.43e-07;12!UBERON:0000988;3.80e-07;3!UBERON:0004732;6.76e-07;13|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.12e-43,56;UBERON:0005068,3.12e-43,56;UBERON:0006241,3.12e-43,56;UBERON:0007135,3.12e-43,56;UBERON:0000073,5.26e-41,53;UBERON:0002616,5.26e-41,53;UBERON:0003528,2.28e-37,34;UBERON:0002020,2.28e-37,34;UBERON:0001893,3.14e-37,34;UBERON:0000955,2.50e-35,68;UBERON:0006238,2.50e-35,68;UBERON:0002780,8.48e-35,41;UBERON:0001890,8.48e-35,41;UBERON:0003080,8.48e-35,41;UBERON:0006240,8.48e-35,41;UBERON:0002791,7.24e-34,32;UBERON:0001869,1.91e-33,32;UBERON:0001017,1.89e-31,81;UBERON:0003075,2.74e-29,82;UBERON:0007284,2.74e-29,82;UBERON:0001016,7.12e-29,89;UBERON:0002346,2.23e-27,86;UBERON:0000956,3.31e-25,25;UBERON:0000203,3.31e-25,25;UBERON:0010371,3.46e-23,104;UBERON:0003056,2.42e-22,61;UBERON:0002619,9.74e-21,22;UBERON:0010314,3.76e-20,132;UBERON:0001950,9.69e-18,20;UBERON:0007023,1.15e-16,114;UBERON:0004121,6.00e-15,171;UBERON:0000924,6.00e-15,171;UBERON:0006601,6.00e-15,171;UBERON:0000125,8.96e-14,9;UBERON:0002308,8.96e-14,9;UBERON:0002298,4.79e-12,6;UBERON:0002420,1.91e-10,9;UBERON:0007245,1.91e-10,9;UBERON:0010009,1.91e-10,9;UBERON:0010011,1.91e-10,9;UBERON:0000454,1.91e-10,9;UBERON:0009663,3.25e-10,7;UBERON:0003076,1.38e-09,15;UBERON:0003057,1.38e-09,15;UBERON:0000025,2.78e-09,192;UBERON:0011216,1.76e-08,223;UBERON:0003688,4.58e-08,6;UBERON:0002358,4.58e-08,6;UBERON:0003684,4.58e-08,6;UBERON:0001178,4.58e-08,6;UBERON:0000200,4.80e-08,6;UBERON:0004733,1.45e-07,12;UBERON:0002028,1.45e-07,12;UBERON:0007277,1.45e-07,12;UBERON:0000988,4.49e-07,3;UBERON:0004457,4.61e-07,12;UBERON:0000042,4.61e-07,12;UBERON:0004732,6.85e-07,13|phase1_expression=1.63510541343501,0.856402095563933,0.140954404095971,1.0007329835313,1.78784437770915,2.61701557230111,0,0,0,0,0,0,0,0,0,0.6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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5137 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8776 | |||
|TSSclassifier=S | |||
|UniProt=Q14123,F8W905 | |||
|association_with_transcript=0bp_to_ENST00000321453,ENST00000396184,ENST00000396189,NM_005020_5end | |||
|coexpression_cluster_id=C2893 | |||
|description=CAGE_peak_5_at_PDE1C_5end | |||
|id=chr7:32111009..32111055,- | |||
|ontology_enrichment_celltype=CL:0000057!4.08e-09!75;CL:0000055!1.21e-07!180;CL:0002620!4.40e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.88e-08;23!CL:0002579;5.11e-07;3!CL:0002580;6.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.48e-08,76;CL:0002620,1.85e-08,23;CL:0002579,4.59e-07,3;CL:0002580,9.31e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.42e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.05e-30!57;UBERON:0005068!1.05e-30!57;UBERON:0006241!1.05e-30!57;UBERON:0007135!1.05e-30!57;UBERON:0000955!3.83e-27!69;UBERON:0006238!3.83e-27!69;UBERON:0002616!4.53e-27!59;UBERON:0001017!8.47e-25!82;UBERON:0002020!1.56e-24!34;UBERON:0003528!1.56e-24!34;UBERON:0001893!1.90e-24!34;UBERON:0005743!4.15e-24!86;UBERON:0002791!1.45e-23!33;UBERON:0002780!1.90e-23!41;UBERON:0001890!1.90e-23!41;UBERON:0006240!1.90e-23!41;UBERON:0003080!1.30e-22!42;UBERON:0000073!3.30e-22!94;UBERON:0001016!3.30e-22!94;UBERON:0001869!3.50e-22!32;UBERON:0007023!7.27e-18!115;UBERON:0003075!6.15e-17!86;UBERON:0007284!6.15e-17!86;UBERON:0000956!7.69e-16!25;UBERON:0000203!7.69e-16!25;UBERON:0002346!1.65e-15!90;UBERON:0000033!6.39e-14!123;UBERON:0003056!3.27e-13!61;UBERON:0002619!3.36e-13!22;UBERON:0000153!1.69e-12!129;UBERON:0007811!1.69e-12!129;UBERON:0001950!2.01e-11!20;UBERON:0002308!1.42e-10!9;UBERON:0000125!1.42e-10!9;UBERON:0004121!1.83e-10!169;UBERON:0000924!8.02e-10!173;UBERON:0006601!8.02e-10!173;UBERON:0000475!1.72e-09!365;UBERON:0003076!3.55e-09!15;UBERON:0003057!3.55e-09!15;UBERON:0000025!1.25e-08!194;UBERON:0009663!1.98e-08!7;UBERON:0004733!3.61e-08!12;UBERON:0002028!3.61e-08!12;UBERON:0007277!3.61e-08!12;UBERON:0002420!3.74e-08!9;UBERON:0007245!3.74e-08!9;UBERON:0010009!3.74e-08!9;UBERON:0010011!3.74e-08!9;UBERON:0000454!3.74e-08!9;UBERON:0002298!1.38e-07!8;UBERON:0004732!2.49e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.88e-32;34!UBERON:0003528;7.70e-31;34!UBERON:0002020;7.70e-31;34!UBERON:0002791;4.52e-30;32!UBERON:0001869;1.13e-29;32!UBERON:0002780;5.00e-25;41!UBERON:0001890;5.00e-25;41!UBERON:0000956;5.05e-25;25!UBERON:0000203;5.05e-25;25!UBERON:0000073;1.81e-23;53!UBERON:0002616;1.81e-23;53!UBERON:0002619;1.71e-20;22!UBERON:0001950;1.64e-17;20!UBERON:0000125;6.21e-14;9!UBERON:0002308;6.21e-14;9!UBERON:0000955;1.37e-13;68!UBERON:0001017;1.62e-12;75!UBERON:0002298;4.53e-12;6!UBERON:0001016;9.29e-11;83!UBERON:0002420;1.75e-10;9!UBERON:0007245;1.75e-10;9!UBERON:0010009;1.75e-10;9!UBERON:0010011;1.75e-10;9!UBERON:0000454;1.75e-10;9!UBERON:0009663;2.43e-10;7!UBERON:0004457;1.12e-09;9!UBERON:0000042;1.12e-09;9!UBERON:0003688;4.60e-08;6!UBERON:0002358;4.60e-08;6!UBERON:0003684;4.60e-08;6!UBERON:0001178;4.60e-08;6!UBERON:0000200;7.81e-08;6!UBERON:0004733;1.43e-07;12!UBERON:0002028;1.43e-07;12!UBERON:0000988;3.80e-07;3!UBERON:0004732;6.76e-07;13 | |||
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|short_description=p5@PDE1C | |||
}} |
Revision as of 00:58, 14 September 2013
Short description: | p5@PDE1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PDE1C_5end |
Coexpression cluster: | C2893_Fibroblast_Olfactory_heart_papillary_left_basal_glioblastoma |
Association with transcript: | 0bp_to_ENST00000321453, ENST00000396184, ENST00000396189, NM_005020_5end |
EntrezGene: | PDE1C |
HGNC: | 8776 |
UniProt: | Q14123F8W905 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.48e-08 | 76 |
skin fibroblast | 1.85e-08 | 23 |
omentum preadipocyte | 4.59e-07 | 3 |
preadipocyte of the breast | 9.31e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.