FFCP PHASE1:Mm9::chr3:104598813..104598825,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:104598813..104598825,+|id=chr3:104598813..104598825,+|ontology_enrichment_celltype=CL:0000239!9.95e-22!6;CL:0000677!9.95e-22!6;CL:0000212!9.95e-22!6;CL:0000584!9.95e-22!6;CL:0002563!6.88e-19!9;CL:0002251!6.88e-19!9;CL:0000075!1.55e-18!7;CL:0000066!1.58e-12!25;CL:0002076!5.98e-11!15;CL:0000223!2.93e-10!20|ontology_enrichment_celltype_v019_2=CL:0000239,3.23e-52,6;CL:0000677,3.23e-52,6;CL:0000584,3.23e-52,6;CL:0000075,7.50e-45,7;CL:0002563,5.09e-35,9;CL:0002251,5.09e-35,9;CL:0002076,3.22e-21,15;CL:0000066,3.21e-18,25;CL:0000223,5.06e-16,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001242!8.00e-31!13;UBERON:0000060!8.00e-31!13;UBERON:0001262!8.00e-31!13;UBERON:0004786!8.00e-31!13;UBERON:0000344!1.94e-26!15;UBERON:0000160!1.59e-22!43;UBERON:0003350!6.88e-19!9;UBERON:0004808!6.88e-19!9;UBERON:0001277!6.88e-19!9;UBERON:0004923!9.61e-16!24;UBERON:0005409!1.95e-15!59;UBERON:0000485!2.78e-15!11;UBERON:0000331!1.38e-10!3;UBERON:0002116!1.38e-10!3;UBERON:0001204!1.38e-10!3;UBERON:0001168!1.38e-10!3|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.09e-35,9;UBERON:0004808,5.09e-35,9;UBERON:0001277,5.09e-35,9;UBERON:0000485,9.39e-29,11;UBERON:0001242,2.07e-24,13;UBERON:0001262,2.07e-24,13;UBERON:0004786,2.07e-24,13;UBERON:0000344,3.22e-21,15;UBERON:0000160,8.93e-15,31;UBERON:0004923,2.05e-13,24;UBERON:0005409,8.06e-10,47|phase1_expression=0,2.79180326111489,3.63999391511629,9.0739263392049,4.00716583957078,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,1.72269589234506,0,0.861884930743556,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,2.3800550999719,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr3:104598813..104598825,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:104598813..104598825,+ | |||
|id=chr3:104598813..104598825,+ | |||
|ontology_enrichment_celltype=CL:0000239!9.95e-22!6;CL:0000677!9.95e-22!6;CL:0000212!9.95e-22!6;CL:0000584!9.95e-22!6;CL:0002563!6.88e-19!9;CL:0002251!6.88e-19!9;CL:0000075!1.55e-18!7;CL:0000066!1.58e-12!25;CL:0002076!5.98e-11!15;CL:0000223!2.93e-10!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.23e-52,6;CL:0000677,3.23e-52,6;CL:0000584,3.23e-52,6;CL:0000075,7.50e-45,7;CL:0002563,5.09e-35,9;CL:0002251,5.09e-35,9;CL:0002076,3.22e-21,15;CL:0000066,3.21e-18,25;CL:0000223,5.06e-16,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!8.00e-31!13;UBERON:0000060!8.00e-31!13;UBERON:0001262!8.00e-31!13;UBERON:0004786!8.00e-31!13;UBERON:0000344!1.94e-26!15;UBERON:0000160!1.59e-22!43;UBERON:0003350!6.88e-19!9;UBERON:0004808!6.88e-19!9;UBERON:0001277!6.88e-19!9;UBERON:0004923!9.61e-16!24;UBERON:0005409!1.95e-15!59;UBERON:0000485!2.78e-15!11;UBERON:0000331!1.38e-10!3;UBERON:0002116!1.38e-10!3;UBERON:0001204!1.38e-10!3;UBERON:0001168!1.38e-10!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.09e-35,9;UBERON:0004808,5.09e-35,9;UBERON:0001277,5.09e-35,9;UBERON:0000485,9.39e-29,11;UBERON:0001242,2.07e-24,13;UBERON:0001262,2.07e-24,13;UBERON:0004786,2.07e-24,13;UBERON:0000344,3.22e-21,15;UBERON:0000160,8.93e-15,31;UBERON:0004923,2.05e-13,24;UBERON:0005409,8.06e-10,47 | |||
|phase1_expression=0,2.79180326111489,3.63999391511629,9.0739263392049,4.00716583957078,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,1.72269589234506,0,0.861884930743556,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,2.3800550999719,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:104598813..104598825,+ | |||
}} |
Revision as of 01:06, 14 September 2013
Short description: | p@chr3:104598813..104598825, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:104598813..104598825, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.23e-52 | 6 |
gut absorptive cell | 3.23e-52 | 6 |
enterocyte | 3.23e-52 | 6 |
columnar/cuboidal epithelial cell | 7.50e-45 | 7 |
intestinal epithelial cell | 5.09e-35 | 9 |
epithelial cell of alimentary canal | 5.09e-35 | 9 |
endo-epithelial cell | 3.22e-21 | 15 |
epithelial cell | 3.21e-18 | 25 |
endodermal cell | 5.06e-16 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.09e-35 | 9 |
gastrointestinal system epithelium | 5.09e-35 | 9 |
intestinal epithelium | 5.09e-35 | 9 |
simple columnar epithelium | 9.39e-29 | 11 |
intestinal mucosa | 2.07e-24 | 13 |
wall of intestine | 2.07e-24 | 13 |
gastrointestinal system mucosa | 2.07e-24 | 13 |
mucosa | 3.22e-21 | 15 |
intestine | 8.93e-15 | 31 |
organ component layer | 2.05e-13 | 24 |
gastrointestinal system | 8.06e-10 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.