FFCP PHASE1:Mm9::chr3:144681646..144681660,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=274|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:144681646..144681660,-|id=chr3:144681646..144681660,-|ontology_enrichment_celltype=CL:0002563!1.28e-07!9;CL:0002251!1.28e-07!9|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.01e-20!43;UBERON:0005409!1.13e-19!59;UBERON:0000344!1.27e-18!15;UBERON:0001242!7.69e-15!13;UBERON:0000060!7.69e-15!13;UBERON:0001262!7.69e-15!13;UBERON:0004786!7.69e-15!13;UBERON:0001007!7.52e-13!128;UBERON:0001555!7.52e-13!128;UBERON:0007026!7.52e-13!128;UBERON:0004119!1.61e-12!130;UBERON:0000925!1.61e-12!130;UBERON:0006595!1.61e-12!130;UBERON:0004923!2.37e-12!24;UBERON:0004921!5.17e-11!126;UBERON:0004185!5.17e-11!126;UBERON:0000331!7.10e-08!3;UBERON:0002116!7.10e-08!3;UBERON:0001204!7.10e-08!3;UBERON:0001168!7.10e-08!3;UBERON:0003350!1.28e-07!9;UBERON:0004808!1.28e-07!9;UBERON:0001277!1.28e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.00e-23,31;UBERON:0002108,3.63e-22,4;UBERON:0000344,5.84e-22,15;UBERON:0000331,3.99e-17,3;UBERON:0002116,3.99e-17,3;UBERON:0001204,3.99e-17,3;UBERON:0001168,3.99e-17,3;UBERON:0005409,4.05e-17,47;UBERON:0001242,1.48e-14,13;UBERON:0001262,1.48e-14,13;UBERON:0004786,1.48e-14,13;UBERON:0004923,2.14e-13,24;UBERON:0001962,1.67e-11,2;UBERON:0001961,1.67e-11,2;UBERON:0001744,1.67e-11,2;UBERON:0001007,3.57e-08,116;UBERON:0001555,3.57e-08,116;UBERON:0007026,3.57e-08,116;UBERON:0004119,5.35e-08,118;UBERON:0000925,5.35e-08,118;UBERON:0006595,5.35e-08,118;UBERON:0002465,5.88e-08,3|phase1_expression=0,0,0.454999239389536,0.30246421130683,0,3.02182689441402,8.1764424208434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,5.43974237497583,2.52350209173887,0,0.430761996159075,2.58565479223067,16.3420140732482,8.31699428207772,2.88249663851896,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,0.793351699990633,0,0,0,0.201683524623343,0.889512175379481,0.190225626112559,2.84717436926707,1.15289268306808,0,0.596869416123452,0.38992817423824,0.898819408654221,4.10662294761919,3.18626037206988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.797273843287435,0.163863314715738,0.690739927463582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0.26175594198403,1.8146096260851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,2.74727436400898,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr3:144681646..144681660,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=274 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:144681646..144681660,- | |||
|id=chr3:144681646..144681660,- | |||
|ontology_enrichment_celltype=CL:0002563!1.28e-07!9;CL:0002251!1.28e-07!9 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.01e-20!43;UBERON:0005409!1.13e-19!59;UBERON:0000344!1.27e-18!15;UBERON:0001242!7.69e-15!13;UBERON:0000060!7.69e-15!13;UBERON:0001262!7.69e-15!13;UBERON:0004786!7.69e-15!13;UBERON:0001007!7.52e-13!128;UBERON:0001555!7.52e-13!128;UBERON:0007026!7.52e-13!128;UBERON:0004119!1.61e-12!130;UBERON:0000925!1.61e-12!130;UBERON:0006595!1.61e-12!130;UBERON:0004923!2.37e-12!24;UBERON:0004921!5.17e-11!126;UBERON:0004185!5.17e-11!126;UBERON:0000331!7.10e-08!3;UBERON:0002116!7.10e-08!3;UBERON:0001204!7.10e-08!3;UBERON:0001168!7.10e-08!3;UBERON:0003350!1.28e-07!9;UBERON:0004808!1.28e-07!9;UBERON:0001277!1.28e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.00e-23,31;UBERON:0002108,3.63e-22,4;UBERON:0000344,5.84e-22,15;UBERON:0000331,3.99e-17,3;UBERON:0002116,3.99e-17,3;UBERON:0001204,3.99e-17,3;UBERON:0001168,3.99e-17,3;UBERON:0005409,4.05e-17,47;UBERON:0001242,1.48e-14,13;UBERON:0001262,1.48e-14,13;UBERON:0004786,1.48e-14,13;UBERON:0004923,2.14e-13,24;UBERON:0001962,1.67e-11,2;UBERON:0001961,1.67e-11,2;UBERON:0001744,1.67e-11,2;UBERON:0001007,3.57e-08,116;UBERON:0001555,3.57e-08,116;UBERON:0007026,3.57e-08,116;UBERON:0004119,5.35e-08,118;UBERON:0000925,5.35e-08,118;UBERON:0006595,5.35e-08,118;UBERON:0002465,5.88e-08,3 | |||
|phase1_expression=0,0,0.454999239389536,0.30246421130683,0,3.02182689441402,8.1764424208434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,5.43974237497583,2.52350209173887,0,0.430761996159075,2.58565479223067,16.3420140732482,8.31699428207772,2.88249663851896,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,0.793351699990633,0,0,0,0.201683524623343,0.889512175379481,0.190225626112559,2.84717436926707,1.15289268306808,0,0.596869416123452,0.38992817423824,0.898819408654221,4.10662294761919,3.18626037206988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.797273843287435,0.163863314715738,0.690739927463582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0.26175594198403,1.8146096260851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,2.74727436400898,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr3:144681646..144681660,- | |||
}} |
Revision as of 01:44, 14 September 2013
Short description: | p@chr3:144681646..144681660, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:144681646..144681660, - |
Coexpression cluster: | MCL_coexpression_mm9:274 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 7.00e-23 | 31 |
small intestine | 3.63e-22 | 4 |
mucosa | 5.84e-22 | 15 |
ileal mucosa | 3.99e-17 | 3 |
ileum | 3.99e-17 | 3 |
mucosa of small intestine | 3.99e-17 | 3 |
wall of small intestine | 3.99e-17 | 3 |
gastrointestinal system | 4.05e-17 | 47 |
intestinal mucosa | 1.48e-14 | 13 |
wall of intestine | 1.48e-14 | 13 |
gastrointestinal system mucosa | 1.48e-14 | 13 |
organ component layer | 2.14e-13 | 24 |
gut-associated lymphoid tissue | 1.67e-11 | 2 |
mucosa-associated lymphoid tissue | 1.67e-11 | 2 |
lymphoid tissue | 1.67e-11 | 2 |
digestive system | 3.57e-08 | 116 |
digestive tract | 3.57e-08 | 116 |
primitive gut | 3.57e-08 | 116 |
endoderm-derived structure | 5.35e-08 | 118 |
endoderm | 5.35e-08 | 118 |
presumptive endoderm | 5.35e-08 | 118 |
lymphoid system | 5.88e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.