Personal tools

FFCP PHASE1:Mm9::chr3:145784619..145784647,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=171166|HGNC=|UniProt=Q8R4F0|association_with_transcript=0bp_to_ENSMUST00000039450_5end|description=CAGE_peak_3_at_Mcoln3_5end|id=chr3:145784619..145784647,+|ontology_enrichment_celltype=CL:0000542!1.60e-07!13;CL:0000051!1.60e-07!13;CL:0000791!5.49e-07!9;CL:0000789!5.49e-07!9;CL:0002420!5.49e-07!9;CL:0002419!5.49e-07!9;CL:0000790!5.49e-07!9|ontology_enrichment_celltype_v019_2=CL:0000542,1.24e-09,13;CL:0000051,1.24e-09,13;CL:0002031,2.11e-08,25;CL:0000791,3.42e-08,9;CL:0000789,3.42e-08,9;CL:0002420,3.42e-08,9;CL:0002419,3.42e-08,9;CL:0000790,3.42e-08,9;CL:0000838,5.60e-08,12;CL:0000988,2.16e-07,32;CL:0002032,2.16e-07,32;CL:0000037,2.16e-07,32;CL:0000837,2.16e-07,32;CL:0000738,5.17e-07,17;CL:0002087,5.17e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.56e-13!29;UBERON:0002370!2.19e-11!23;UBERON:0000974!2.19e-11!23;UBERON:0004807!2.19e-11!23;UBERON:0005058!2.19e-11!23;UBERON:0003351!2.19e-11!23;UBERON:0009113!2.19e-11!23;UBERON:0003295!2.19e-11!23;UBERON:0009722!2.19e-11!23;UBERON:0005562!2.19e-11!23;UBERON:0007690!2.19e-11!23;UBERON:0006562!1.52e-10!24;UBERON:0003408!1.52e-10!24;UBERON:0001557!1.52e-10!24;UBERON:0001042!1.52e-10!24;UBERON:0008814!1.52e-10!24;UBERON:0009145!1.52e-10!24;UBERON:0002193!3.27e-10!48;UBERON:0002390!9.12e-10!45;UBERON:0003061!9.12e-10!45;UBERON:0000065!1.64e-08!41;UBERON:0000072!1.93e-08!27;UBERON:0001004!4.62e-08!42;UBERON:0001048!4.90e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.97e-18,23;UBERON:0000974,9.97e-18,23;UBERON:0004807,9.97e-18,23;UBERON:0005058,9.97e-18,23;UBERON:0003351,9.97e-18,23;UBERON:0009113,9.97e-18,23;UBERON:0003295,9.97e-18,23;UBERON:0009722,9.97e-18,23;UBERON:0005562,9.97e-18,23;UBERON:0007690,9.97e-18,23;UBERON:0004177,3.87e-17,29;UBERON:0005057,3.87e-17,29;UBERON:0006562,7.87e-17,24;UBERON:0003408,7.87e-17,24;UBERON:0001557,7.87e-17,24;UBERON:0001042,7.87e-17,24;UBERON:0008814,7.87e-17,24;UBERON:0009145,7.87e-17,24;UBERON:0002193,2.18e-16,48;UBERON:0002405,2.18e-16,48;UBERON:0002390,5.84e-16,45;UBERON:0003061,5.84e-16,45;UBERON:0000153,9.73e-15,43;UBERON:0000072,1.53e-14,27;UBERON:0000077,1.82e-13,35;UBERON:0007811,4.34e-13,36;UBERON:0000065,1.35e-09,41;UBERON:0001004,2.81e-09,42;UBERON:0003081,3.34e-08,87|phase1_expression=0.960893082628764,0,0,0,0,0,0,6.84353614240354,0.281577444303333,0.468129052643987,0.856089841127525,1.83475965689274,3.0816131387617,5.07038334030185,0,1.21485160433896,0.699561878128147,4.73193248037357,6.03303507865251,5.94145512517242,0.340173160604279,0.198581902401771,0,0.319984845586813,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,2.85230430298152,1.45072428402269,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.845060518660083,0,0,0,0,0,0,0.5709193985953,3.88406825470758,0.148442139064825,0.693941307064543,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0.509196819251581,0.124406970610093,0,0.210441855886474,2.73252930221678,0.919608417733892,1.26043490863744,0.150704817835715,0,0.12811372028485,0.187403449119458,0.258703370739016,1.72454394346274,2.26927296201383,1.23165786914764,0.43839146485515,0.278047249225598,0,0.205782136407943,2.38841120182192,0,0,0,0.828503090142008,0.703578179943289,0.36012412292203,0.23674473558521,0.393528463494808,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,5.33220626338085,3.0190767341857,0.515469845288373,0,0.444756087689741,0,0,0,0,0,0,0,0,0,1.13800740571849,1.14248512609729,2.25415471346161,0.203651327845314,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,0.667380422864376,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,1.70542270593436,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0.518054945597687,0,0,0,0,0,0,0,0,0,0,0.780877488593277,0,0,0,0,0,0,0,0,0.283880170416537,0.712262414669021,0.488660878060728,0.329940245945071,0,1.21390318077491,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.340439605753788,1.44048875225048,2.32845630808958,0.428674070063185,0.709360934569094,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0,0,0.161464426695906,0,0,0,0,0,1.36696704638282,0.412773735926445,0.185194527369712,0.188368457004691,0.683471138605126,1.37266903923914,0.849892149969277,0.279902904647316,0.690999869022119,0,3.00519193902079,0.813277868507395,0,0,0.436725127492355,0,0.0826534557253359,0,0,0,0,0.897099276263873,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,3.79213344753814,1.01362607645082,0.616265742988964,0.51968329191118,1.07416017400489,1.39076948346885,2.76449533895928,3.39685912501528,4.74542314756294,2.89585865288999,4.43635214602098,4.28814675254911,5.58028681513911,3.97381467417334,0,0.221985953374065,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,1.19707462020309,1.70733605754134,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0,0,0,0,0.192075457214608,0,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0,0.561142271657738,0.118635018124174,0.197008964751127,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p3@Mcoln3}}
|EntrezGene=171166
|HGNC=
|UniProt=Q8R4F0
|association_with_transcript=0bp_to_ENSMUST00000039450_5end
|description=CAGE_peak_3_at_Mcoln3_5end
|id=chr3:145784619..145784647,+
|ontology_enrichment_celltype=CL:0000542!1.60e-07!13;CL:0000051!1.60e-07!13;CL:0000791!5.49e-07!9;CL:0000789!5.49e-07!9;CL:0002420!5.49e-07!9;CL:0002419!5.49e-07!9;CL:0000790!5.49e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000542,1.24e-09,13;CL:0000051,1.24e-09,13;CL:0002031,2.11e-08,25;CL:0000791,3.42e-08,9;CL:0000789,3.42e-08,9;CL:0002420,3.42e-08,9;CL:0002419,3.42e-08,9;CL:0000790,3.42e-08,9;CL:0000838,5.60e-08,12;CL:0000988,2.16e-07,32;CL:0002032,2.16e-07,32;CL:0000037,2.16e-07,32;CL:0000837,2.16e-07,32;CL:0000738,5.17e-07,17;CL:0002087,5.17e-07,17
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!1.56e-13!29;UBERON:0002370!2.19e-11!23;UBERON:0000974!2.19e-11!23;UBERON:0004807!2.19e-11!23;UBERON:0005058!2.19e-11!23;UBERON:0003351!2.19e-11!23;UBERON:0009113!2.19e-11!23;UBERON:0003295!2.19e-11!23;UBERON:0009722!2.19e-11!23;UBERON:0005562!2.19e-11!23;UBERON:0007690!2.19e-11!23;UBERON:0006562!1.52e-10!24;UBERON:0003408!1.52e-10!24;UBERON:0001557!1.52e-10!24;UBERON:0001042!1.52e-10!24;UBERON:0008814!1.52e-10!24;UBERON:0009145!1.52e-10!24;UBERON:0002193!3.27e-10!48;UBERON:0002390!9.12e-10!45;UBERON:0003061!9.12e-10!45;UBERON:0000065!1.64e-08!41;UBERON:0000072!1.93e-08!27;UBERON:0001004!4.62e-08!42;UBERON:0001048!4.90e-07!147
|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.97e-18,23;UBERON:0000974,9.97e-18,23;UBERON:0004807,9.97e-18,23;UBERON:0005058,9.97e-18,23;UBERON:0003351,9.97e-18,23;UBERON:0009113,9.97e-18,23;UBERON:0003295,9.97e-18,23;UBERON:0009722,9.97e-18,23;UBERON:0005562,9.97e-18,23;UBERON:0007690,9.97e-18,23;UBERON:0004177,3.87e-17,29;UBERON:0005057,3.87e-17,29;UBERON:0006562,7.87e-17,24;UBERON:0003408,7.87e-17,24;UBERON:0001557,7.87e-17,24;UBERON:0001042,7.87e-17,24;UBERON:0008814,7.87e-17,24;UBERON:0009145,7.87e-17,24;UBERON:0002193,2.18e-16,48;UBERON:0002405,2.18e-16,48;UBERON:0002390,5.84e-16,45;UBERON:0003061,5.84e-16,45;UBERON:0000153,9.73e-15,43;UBERON:0000072,1.53e-14,27;UBERON:0000077,1.82e-13,35;UBERON:0007811,4.34e-13,36;UBERON:0000065,1.35e-09,41;UBERON:0001004,2.81e-09,42;UBERON:0003081,3.34e-08,87
|phase1_expression=0.960893082628764,0,0,0,0,0,0,6.84353614240354,0.281577444303333,0.468129052643987,0.856089841127525,1.83475965689274,3.0816131387617,5.07038334030185,0,1.21485160433896,0.699561878128147,4.73193248037357,6.03303507865251,5.94145512517242,0.340173160604279,0.198581902401771,0,0.319984845586813,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,2.85230430298152,1.45072428402269,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.845060518660083,0,0,0,0,0,0,0.5709193985953,3.88406825470758,0.148442139064825,0.693941307064543,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0.509196819251581,0.124406970610093,0,0.210441855886474,2.73252930221678,0.919608417733892,1.26043490863744,0.150704817835715,0,0.12811372028485,0.187403449119458,0.258703370739016,1.72454394346274,2.26927296201383,1.23165786914764,0.43839146485515,0.278047249225598,0,0.205782136407943,2.38841120182192,0,0,0,0.828503090142008,0.703578179943289,0.36012412292203,0.23674473558521,0.393528463494808,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,5.33220626338085,3.0190767341857,0.515469845288373,0,0.444756087689741,0,0,0,0,0,0,0,0,0,1.13800740571849,1.14248512609729,2.25415471346161,0.203651327845314,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,0.667380422864376,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,1.70542270593436,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0.518054945597687,0,0,0,0,0,0,0,0,0,0,0.780877488593277,0,0,0,0,0,0,0,0,0.283880170416537,0.712262414669021,0.488660878060728,0.329940245945071,0,1.21390318077491,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.340439605753788,1.44048875225048,2.32845630808958,0.428674070063185,0.709360934569094,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0,0,0.161464426695906,0,0,0,0,0,1.36696704638282,0.412773735926445,0.185194527369712,0.188368457004691,0.683471138605126,1.37266903923914,0.849892149969277,0.279902904647316,0.690999869022119,0,3.00519193902079,0.813277868507395,0,0,0.436725127492355,0,0.0826534557253359,0,0,0,0,0.897099276263873,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,3.79213344753814,1.01362607645082,0.616265742988964,0.51968329191118,1.07416017400489,1.39076948346885,2.76449533895928,3.39685912501528,4.74542314756294,2.89585865288999,4.43635214602098,4.28814675254911,5.58028681513911,3.97381467417334,0,0.221985953374065,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,1.19707462020309,1.70733605754134,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0,0,0,0,0.192075457214608,0,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0,0.561142271657738,0.118635018124174,0.197008964751127,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0
|short_description=p3@Mcoln3
}}

Revision as of 01:46, 14 September 2013

Short description:p3@Mcoln3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Mcoln3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000039450_5end
EntrezGene:Mcoln3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Mcoln3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.07
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.03
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I55.33
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F82.76
thymus, neonate N03.CNhs11137.2104-43C73.40
thymus, neonate N06.CNhs11197.681-26C44.75
thymus, neonate N07.CNhs11211.713-19D32.90
thymus, neonate N10.CNhs11194.748-24E44.44
thymus, neonate N20.CNhs11186.820-7A24.29
thymus, neonate N25.CNhs11125.1362-25G75.58
thymus, neonate N30.CNhs11132.1393-42G23.97
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thymus9.97e-1823
neck9.97e-1823
respiratory system epithelium9.97e-1823
hemolymphoid system gland9.97e-1823
pharyngeal epithelium9.97e-1823
thymic region9.97e-1823
pharyngeal gland9.97e-1823
entire pharyngeal arch endoderm9.97e-1823
thymus primordium9.97e-1823
early pharyngeal endoderm9.97e-1823
hemopoietic organ3.87e-1729
immune organ3.87e-1729
pharynx7.87e-1724
gland of gut7.87e-1724
upper respiratory tract7.87e-1724
chordate pharynx7.87e-1724
pharyngeal arch system7.87e-1724
pharyngeal region of foregut7.87e-1724
hemolymphoid system2.18e-1648
immune system2.18e-1648
hematopoietic system5.84e-1645
blood island5.84e-1645
anterior region of body9.73e-1543
segment of respiratory tract1.53e-1427
mixed endoderm/mesoderm-derived structure1.82e-1335
craniocervical region4.34e-1336
respiratory tract1.35e-0941
respiratory system2.81e-0942
lateral plate mesoderm3.34e-0887







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:145784619..145784647,%2B&oldid=2995647"