FFCP PHASE1:Hg19::chr8:110374683..110374759,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=93035|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20313|TSSclassifier=W|UniProt=Q86WI1|association_with_transcript=0bp_to_ENST00000378402,NM_177531,uc003yne.2_5end|coexpression_cluster_id=C113|description=CAGE_peak_1_at_PKHD1L1_5end|id=chr8:110374683..110374759,+|ontology_enrichment_celltype=CL:0002139!9.60e-08!24|ontology_enrichment_celltype_v019=CL:0002138;3.68e-08;6!CL:0002139;6.82e-08;24|ontology_enrichment_celltype_v019_2=CL:0005020,4.91e-08,6;CL:0002138,4.91e-08,6;CL:0005022,4.91e-08,6;CL:0002139,7.77e-08,24|ontology_enrichment_development_v019=CL:0005022;3.68e-08;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.46e-56!115;UBERON:0004111!4.11e-10!241;UBERON:0000477!2.13e-09!286;UBERON:0003075!1.78e-08!86;UBERON:0007284!1.78e-08!86;UBERON:0000178!2.58e-08!15;UBERON:0000179!2.58e-08!15;UBERON:0000463!2.58e-08!15;UBERON:0000468!2.64e-08!659;UBERON:0001009!2.94e-08!113;UBERON:0000025!3.05e-08!194;UBERON:0001049!7.22e-08!57;UBERON:0005068!7.22e-08!57;UBERON:0006241!7.22e-08!57;UBERON:0007135!7.22e-08!57;UBERON:0002346!1.52e-07!90;UBERON:0004535!3.72e-07!110;UBERON:0000467!9.11e-07!625|ontology_enrichment_uberon_v019=UBERON:0007023;8.39e-11;114!UBERON:0000178;1.42e-09;15!UBERON:0000179;1.42e-09;15!UBERON:0000463;1.42e-09;15!UBERON:0002465;3.20e-08;10!UBERON:0002193;1.12e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.29e-44,114;UBERON:0000178,1.42e-09,15;UBERON:0000179,1.42e-09,15;UBERON:0000463,1.42e-09,15;UBERON:0001009,1.34e-08,112;UBERON:0002465,4.05e-08,10;UBERON:0004535,3.59e-07,109|phase1_expression=0,0,0.140954404095971,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.53531759238885,0.309632246632152,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,1.77901850772711,0,0.400395987036012,1.14950487990897,0.661044872784862,1.90810750907073,0,0,0,3.96513985737078,0,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,9.75227465255847,0,0.639312809217652,0,0,0,0,0,0.0945348171640679,0,0,3.66741411393595,0,0,0.324547393654683,0,0,0,0,0,0,0,0.694281003215189,3.39184765154406,4.61449379830897,0.275118041940067,0.835979866147242,1.03366703667732,2.84613010149368,4.01664735317604,5.63961043952806,5.32190474002959,7.32186172644509,0.367663080345869,0,1.3394959242612,2.91888184414021,1.57656072676651,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0,0.709336764396714,6.16745360156538,0,0,0.311211035399766,0.134710672069688,0.817309515567294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0513864419246,1.47008711385542,0,0,2.36315962672562,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,6.35212370148725,6.01881166349594,22.259735811448,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,9.0076136004633,0,0,0,6.39705507736582,0,12.0575750823834,13.0730018790044,20.0945712275935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.94597232246485,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0,3.72182447021197,0.647142602455851,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,1.13733384070897,0.680374821106063,1.29549549661284,4.62681758070868,0,0,0,0,0,2.41185864310528,0.522870902049801,0.256450125116389,0,0,8.03719890852234,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,1.71567174531442,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,5.83691564816031,0,0,0,0,25.3723804616085,22.9391162142713,17.659062802399,9.52927101831156,13.5749550118444,25.290459136516,28.081634736382,33.3112574043594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63714722689409,0,0,0,0,0,0,0,0.140669416410513,0,0,0,15.7405910718345,12.4327761989016,0.251932747854276,0,0,0,0,0,0,5.91860433821602,26.3431401581634,0,0,0.649376687132959,0,0,0,7.24999575434793,0,0,0,0.689486746482929,0,0,0,0.120596438625408,0,0.331737779793674,0.295547618953547,3.94893714877151,0,0,17.9294102313847,0.113942055847001,0,0,0,7.97502899329799,0,15.4580085045404,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,15.8339040460977,13.4426631885398,0,0,0,0.876214728748802,44.1417706014334,0,0,0.19566461893209,0,6.31335044559025,6.04953580243319,0.30607276163049,29.8872521642748,0,0,0,0,0,0,0,0,0.173559738335131,0,0,25.6848202315784,0,0,0,0,7.56514328609671,0,4.51961481561065,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=93035 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20313 | |||
|TSSclassifier=W | |||
|UniProt=Q86WI1 | |||
|association_with_transcript=0bp_to_ENST00000378402,NM_177531,uc003yne.2_5end | |||
|coexpression_cluster_id=C113 | |||
|description=CAGE_peak_1_at_PKHD1L1_5end | |||
|id=chr8:110374683..110374759,+ | |||
|ontology_enrichment_celltype=CL:0002139!9.60e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0002138;3.68e-08;6!CL:0002139;6.82e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,4.91e-08,6;CL:0002138,4.91e-08,6;CL:0005022,4.91e-08,6;CL:0002139,7.77e-08,24 | |||
|ontology_enrichment_development_v019=CL:0005022;3.68e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.46e-56!115;UBERON:0004111!4.11e-10!241;UBERON:0000477!2.13e-09!286;UBERON:0003075!1.78e-08!86;UBERON:0007284!1.78e-08!86;UBERON:0000178!2.58e-08!15;UBERON:0000179!2.58e-08!15;UBERON:0000463!2.58e-08!15;UBERON:0000468!2.64e-08!659;UBERON:0001009!2.94e-08!113;UBERON:0000025!3.05e-08!194;UBERON:0001049!7.22e-08!57;UBERON:0005068!7.22e-08!57;UBERON:0006241!7.22e-08!57;UBERON:0007135!7.22e-08!57;UBERON:0002346!1.52e-07!90;UBERON:0004535!3.72e-07!110;UBERON:0000467!9.11e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;8.39e-11;114!UBERON:0000178;1.42e-09;15!UBERON:0000179;1.42e-09;15!UBERON:0000463;1.42e-09;15!UBERON:0002465;3.20e-08;10!UBERON:0002193;1.12e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.29e-44,114;UBERON:0000178,1.42e-09,15;UBERON:0000179,1.42e-09,15;UBERON:0000463,1.42e-09,15;UBERON:0001009,1.34e-08,112;UBERON:0002465,4.05e-08,10;UBERON:0004535,3.59e-07,109 | |||
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| |||
|short_description=p1@PKHD1L1 | |||
}} |
Revision as of 03:06, 14 September 2013
Short description: | p1@PKHD1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PKHD1L1_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | 0bp_to_ENST00000378402, NM_177531, uc003yne.2_5end |
EntrezGene: | PKHD1L1 |
HGNC: | 20313 |
UniProt: | Q86WI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 4.91e-08 | 6 |
endothelial cell of lymphatic vessel | 4.91e-08 | 6 |
vascular lymphangioblast | 4.91e-08 | 6 |
endothelial cell of vascular tree | 7.77e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.29e-44 | 114 |
blood | 1.42e-09 | 15 |
haemolymphatic fluid | 1.42e-09 | 15 |
organism substance | 1.42e-09 | 15 |
circulatory system | 1.34e-08 | 112 |
lymphoid system | 4.05e-08 | 10 |
cardiovascular system | 3.59e-07 | 109 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.