Personal tools

FFCP PHASE1:Mm9::chr3:98090930..98090931,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=62|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:98090930..98090931,+|id=chr3:98090930..98090931,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!6.68e-12!23;UBERON:0009856!6.68e-12!23;UBERON:0002107!2.96e-11!22;UBERON:0007499!2.96e-11!22;UBERON:0006925!2.96e-11!22;UBERON:0009497!2.96e-11!22;UBERON:0000015!2.96e-11!22;UBERON:0002423!2.96e-11!22;UBERON:0006235!2.96e-11!22;UBERON:0008835!2.96e-11!22;UBERON:0003894!2.96e-11!22;UBERON:0004161!2.96e-11!22;UBERON:0008836!2.96e-11!22;UBERON:0004921!1.77e-09!126;UBERON:0004185!1.77e-09!126;UBERON:0002365!2.14e-09!25;UBERON:0002330!2.14e-09!25;UBERON:0001007!7.20e-09!128;UBERON:0001555!7.20e-09!128;UBERON:0007026!7.20e-09!128;UBERON:0004119!1.34e-08!130;UBERON:0000925!1.34e-08!130;UBERON:0006595!1.34e-08!130;UBERON:0000466!2.13e-07!79;UBERON:0000160!2.88e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0009854,6.06e-18,23;UBERON:0009856,6.06e-18,23;UBERON:0002107,7.76e-17,22;UBERON:0007499,7.76e-17,22;UBERON:0006925,7.76e-17,22;UBERON:0009497,7.76e-17,22;UBERON:0000015,7.76e-17,22;UBERON:0002423,7.76e-17,22;UBERON:0006235,7.76e-17,22;UBERON:0008835,7.76e-17,22;UBERON:0003894,7.76e-17,22;UBERON:0004161,7.76e-17,22;UBERON:0008836,7.76e-17,22;UBERON:0002365,4.54e-14,25;UBERON:0002330,4.54e-14,25;UBERON:0004921,3.01e-10,114;UBERON:0001007,7.50e-10,116;UBERON:0001555,7.50e-10,116;UBERON:0007026,7.50e-10,116;UBERON:0004119,1.80e-09,118;UBERON:0000925,1.80e-09,118;UBERON:0006595,1.80e-09,118;UBERON:0000949,1.11e-07,72;UBERON:0003929,6.05e-07,55|phase1_expression=0.160148847104794,0,0,0.60492842261366,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.809901069559304,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,3.75507105676657,0.498703936075477,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0,0,0,0,0.284743361598206,0,0,0,0.289864488701678,5.16254326188832,0,12.9528765993076,41.5856907166508,21.9533174677694,0.702222100658759,0,0,0,1.12674735821344,0,0,0,0,0,0,4.11061966988616,0.258937883647172,0.148442139064825,0.346970653532272,0,0.230615497256059,0,1.88141931417128,0,0.741584903203122,0,0,0,0,0,9.31958806090611,0.292780797011547,0.41889341362691,0.510914110417183,0,0,0,0,0,0.251308704225729,0.173824320192276,0,0,0.486723789203273,0.81471491080253,0.870848794270651,0,3.15662783829711,0,0,0,0.60281927134286,0.0680364991513279,0.2562274405697,0.0937017245597288,1.03481348295606,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0,0.232533944750408,0,0.817357396570186,0.658239399653922,0.492502392237286,0.486412857275134,0.292399974850665,0.878200461164203,0.402619256281115,0,0.102904612379284,0.330418782983798,1.05780226665418,0,0.464473343720877,0.644337306610467,2.21851877085677,3.33567065767305,3.04361001780095,2.37264530772256,7.5761519173045,20.8608223304224,12.1363447945102,12.6726656627428,2.69645822596266,3.02593269824572,8.56307474993779,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.701358198903186,1.45444035385792,0.590440591918409,0.31399745568275,3.57851775373222,18.0836102523161,0.500535317148282,0.196558995113203,1.79889689907883,1.21716072833102,3.85883455603867,6.11102044275408,10.9324532231308,79.4462611197673,34.5947380616983,143.768206527355,40.1912223481984,23.0907878104775,26.7733610623938,19.3749206603665,45.3496910081565,0.369506380333209,0,0.162964976442026,0.169745085775188,0,0,0,0.585400943573396,0.472905432318573,3.5434350343804,0.478364305972461,0.327726629431476,0,1.44649058581512,0,0,0.491764273019036,0,0,0.937693492737625,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,4.11626247103979,0.35613120733451,0.651547837414304,1.48473110675282,1.32745138339963,0,0,1.32023555829129,0,0.307435147943927,9.8202751403924,5.08947221268508,5.70395805415554,3.79244109522979,0,4.12542172992747,0.680879211507576,0,0,0.428674070063185,0,0.178368817602071,0.493647061806363,0.304464949114599,0.23467170806371,0,0,0.65954501176592,2.09903754704677,0.180938774784468,0.358117032009409,0.492422699235184,8.16146342563582,0,0.341741761595705,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,1.74690050996942,7.41753905116514,7.93473174963225,1.57053565190418,42.3840962664163,0,0,1.19613236835183,0.165458490457098,0.583353565032143,0.387479470433193,1.01373675294467,0.58678619322877,0.651021924219751,1.57289016638566,0.966336483304024,3.16833006883652,0,0,0.205421914329655,0.51968329191118,0.358053391334963,0.198681354781265,1.08175904567972,0.590758108698309,1.11063094942962,1.752756553065,1.31074040677893,0.194915761479505,0.0962118416403295,0.818138315270983,0,0,0,0,0.965947970160952,0.563047426353546,0.36630324853453,0.428736758158132,0,0,0,0.572895513439397,0.515559547031063,0,0,0,0,0,0,0,0,0.341467211508268,0.729320151204882,0,0,0.666740183404846,0.824140228955577,0.64183841918363,0.758091635291392,1.01391719956096,0.754505365544305,0.936415074698824,1.34452820050225,1.03383844120104,0.476293691283074,0.579421629724277,0.964546102318525,1.23625770240992,1.76638704161277,1.71434626192708,0.887379030796687,0.715308569841963,1.59881058295561,2.1645157495526,1.69229215783353,1.82927972872773,0.526139422875686,1.08643291076689,2.24456908663095,0.593175090620871,1.18205378850676,0.818462086339379,1.70430525304563,1.54325288784913,0,3.04111090979031,3.86767897286937,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p@chr3:98090930..98090931,+}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=62
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr3:98090930..98090931,+
|id=chr3:98090930..98090931,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009854!6.68e-12!23;UBERON:0009856!6.68e-12!23;UBERON:0002107!2.96e-11!22;UBERON:0007499!2.96e-11!22;UBERON:0006925!2.96e-11!22;UBERON:0009497!2.96e-11!22;UBERON:0000015!2.96e-11!22;UBERON:0002423!2.96e-11!22;UBERON:0006235!2.96e-11!22;UBERON:0008835!2.96e-11!22;UBERON:0003894!2.96e-11!22;UBERON:0004161!2.96e-11!22;UBERON:0008836!2.96e-11!22;UBERON:0004921!1.77e-09!126;UBERON:0004185!1.77e-09!126;UBERON:0002365!2.14e-09!25;UBERON:0002330!2.14e-09!25;UBERON:0001007!7.20e-09!128;UBERON:0001555!7.20e-09!128;UBERON:0007026!7.20e-09!128;UBERON:0004119!1.34e-08!130;UBERON:0000925!1.34e-08!130;UBERON:0006595!1.34e-08!130;UBERON:0000466!2.13e-07!79;UBERON:0000160!2.88e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0009854,6.06e-18,23;UBERON:0009856,6.06e-18,23;UBERON:0002107,7.76e-17,22;UBERON:0007499,7.76e-17,22;UBERON:0006925,7.76e-17,22;UBERON:0009497,7.76e-17,22;UBERON:0000015,7.76e-17,22;UBERON:0002423,7.76e-17,22;UBERON:0006235,7.76e-17,22;UBERON:0008835,7.76e-17,22;UBERON:0003894,7.76e-17,22;UBERON:0004161,7.76e-17,22;UBERON:0008836,7.76e-17,22;UBERON:0002365,4.54e-14,25;UBERON:0002330,4.54e-14,25;UBERON:0004921,3.01e-10,114;UBERON:0001007,7.50e-10,116;UBERON:0001555,7.50e-10,116;UBERON:0007026,7.50e-10,116;UBERON:0004119,1.80e-09,118;UBERON:0000925,1.80e-09,118;UBERON:0006595,1.80e-09,118;UBERON:0000949,1.11e-07,72;UBERON:0003929,6.05e-07,55
|phase1_expression=0.160148847104794,0,0,0.60492842261366,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.809901069559304,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,3.75507105676657,0.498703936075477,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0,0,0,0,0.284743361598206,0,0,0,0.289864488701678,5.16254326188832,0,12.9528765993076,41.5856907166508,21.9533174677694,0.702222100658759,0,0,0,1.12674735821344,0,0,0,0,0,0,4.11061966988616,0.258937883647172,0.148442139064825,0.346970653532272,0,0.230615497256059,0,1.88141931417128,0,0.741584903203122,0,0,0,0,0,9.31958806090611,0.292780797011547,0.41889341362691,0.510914110417183,0,0,0,0,0,0.251308704225729,0.173824320192276,0,0,0.486723789203273,0.81471491080253,0.870848794270651,0,3.15662783829711,0,0,0,0.60281927134286,0.0680364991513279,0.2562274405697,0.0937017245597288,1.03481348295606,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0,0.232533944750408,0,0.817357396570186,0.658239399653922,0.492502392237286,0.486412857275134,0.292399974850665,0.878200461164203,0.402619256281115,0,0.102904612379284,0.330418782983798,1.05780226665418,0,0.464473343720877,0.644337306610467,2.21851877085677,3.33567065767305,3.04361001780095,2.37264530772256,7.5761519173045,20.8608223304224,12.1363447945102,12.6726656627428,2.69645822596266,3.02593269824572,8.56307474993779,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.701358198903186,1.45444035385792,0.590440591918409,0.31399745568275,3.57851775373222,18.0836102523161,0.500535317148282,0.196558995113203,1.79889689907883,1.21716072833102,3.85883455603867,6.11102044275408,10.9324532231308,79.4462611197673,34.5947380616983,143.768206527355,40.1912223481984,23.0907878104775,26.7733610623938,19.3749206603665,45.3496910081565,0.369506380333209,0,0.162964976442026,0.169745085775188,0,0,0,0.585400943573396,0.472905432318573,3.5434350343804,0.478364305972461,0.327726629431476,0,1.44649058581512,0,0,0.491764273019036,0,0,0.937693492737625,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,4.11626247103979,0.35613120733451,0.651547837414304,1.48473110675282,1.32745138339963,0,0,1.32023555829129,0,0.307435147943927,9.8202751403924,5.08947221268508,5.70395805415554,3.79244109522979,0,4.12542172992747,0.680879211507576,0,0,0.428674070063185,0,0.178368817602071,0.493647061806363,0.304464949114599,0.23467170806371,0,0,0.65954501176592,2.09903754704677,0.180938774784468,0.358117032009409,0.492422699235184,8.16146342563582,0,0.341741761595705,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,1.74690050996942,7.41753905116514,7.93473174963225,1.57053565190418,42.3840962664163,0,0,1.19613236835183,0.165458490457098,0.583353565032143,0.387479470433193,1.01373675294467,0.58678619322877,0.651021924219751,1.57289016638566,0.966336483304024,3.16833006883652,0,0,0.205421914329655,0.51968329191118,0.358053391334963,0.198681354781265,1.08175904567972,0.590758108698309,1.11063094942962,1.752756553065,1.31074040677893,0.194915761479505,0.0962118416403295,0.818138315270983,0,0,0,0,0.965947970160952,0.563047426353546,0.36630324853453,0.428736758158132,0,0,0,0.572895513439397,0.515559547031063,0,0,0,0,0,0,0,0,0.341467211508268,0.729320151204882,0,0,0.666740183404846,0.824140228955577,0.64183841918363,0.758091635291392,1.01391719956096,0.754505365544305,0.936415074698824,1.34452820050225,1.03383844120104,0.476293691283074,0.579421629724277,0.964546102318525,1.23625770240992,1.76638704161277,1.71434626192708,0.887379030796687,0.715308569841963,1.59881058295561,2.1645157495526,1.69229215783353,1.82927972872773,0.526139422875686,1.08643291076689,2.24456908663095,0.593175090620871,1.18205378850676,0.818462086339379,1.70430525304563,1.54325288784913,0,3.04111090979031,3.86767897286937,0.191288332068843,0.220591419119515,0.463735671240843
|short_description=p@chr3:98090930..98090931,+
}}

Revision as of 03:11, 14 September 2013

Short description:p@chr3:98090930..98090931, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr3:98090930..98090931, +
Coexpression cluster:MCL_coexpression_mm9:62
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr3:98090930..98090931+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.95
Mouse hepatocyte, donor6.CNhs13090.11822-124F441.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F621.95
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E97.58
intestine, neonate N06.CNhs11102.688-20B820.86
intestine, neonate N07.CNhs11095.720-20F212.14
intestine, neonate N10.CNhs11098.755-23A512.67
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G18.56
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H13.58
liver, adult pregnant day01.CNhs10466.508-5B218.08
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F53.86
liver, embryo E17.CNhs10510.481-18A36.11
liver, embryo E18.CNhs10579.499-43G410.93
liver, neonate N00.CNhs11117.641-24F479.45
liver, neonate N03.CNhs11123.1345-25G234.59
liver, neonate N06.CNhs11101.684-20A8143.77
liver, neonate N07.CNhs11103.716-20H240.19
liver, neonate N10.CNhs11115.751-24B923.09
liver, neonate N20.CNhs11220.823-25A326.77
liver, neonate N25.CNhs11198.1368-26H119.37
liver, neonate N30.CNhs11106.1382-42D145.35
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I74.12
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G99.82
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I18.16
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B87.42
stomach, neonate N07.CNhs11210.718-18A97.93
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I142.38
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D91.57
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D31.75
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.87
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum6.06e-1823
sac6.06e-1823
liver7.76e-1722
epithelial sac7.76e-1722
digestive gland7.76e-1722
epithelium of foregut-midgut junction7.76e-1722
anatomical boundary7.76e-1722
hepatobiliary system7.76e-1722
foregut-midgut junction7.76e-1722
hepatic diverticulum7.76e-1722
liver primordium7.76e-1722
septum transversum7.76e-1722
liver bud7.76e-1722
exocrine gland4.54e-1425
exocrine system4.54e-1425
subdivision of digestive tract3.01e-10114
digestive system7.50e-10116
digestive tract7.50e-10116
primitive gut7.50e-10116
endoderm-derived structure1.80e-09118
endoderm1.80e-09118
presumptive endoderm1.80e-09118
endocrine system1.11e-0772
gut epithelium6.05e-0755







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:98090930..98090931,%2B&oldid=3002340"