FFCP PHASE1:Mm9::chr4:101760320..101760339,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18578|HGNC=|MCL_coexpression_id=30|UniProt=|association_with_transcript=0bp_to_ENSMUST00000172845_5end|description=CAGE_peak_23_at_Pde4b_5end|id=chr4:101760320..101760339,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.60e-20!71;UBERON:0003075!3.60e-20!71;UBERON:0007284!3.60e-20!71;UBERON:0001017!1.64e-19!73;UBERON:0005743!1.64e-19!73;UBERON:0001049!1.17e-18!52;UBERON:0005068!1.17e-18!52;UBERON:0006241!1.17e-18!52;UBERON:0007135!1.17e-18!52;UBERON:0000073!1.31e-18!75;UBERON:0001016!1.31e-18!75;UBERON:0002020!3.24e-16!34;UBERON:0004121!4.98e-16!102;UBERON:0000924!4.98e-16!102;UBERON:0006601!4.98e-16!102;UBERON:0000955!7.96e-16!50;UBERON:0006238!7.96e-16!50;UBERON:0002616!3.77e-15!49;UBERON:0000033!1.37e-14!63;UBERON:0002791!1.23e-12!29;UBERON:0003528!1.23e-12!29;UBERON:0001893!1.23e-12!29;UBERON:0003056!2.79e-12!49;UBERON:0002021!3.61e-12!10;UBERON:0000411!3.61e-12!10;UBERON:0001950!3.61e-12!10;UBERON:0003080!9.49e-12!40;UBERON:0002780!6.67e-11!39;UBERON:0001890!6.67e-11!39;UBERON:0006240!6.67e-11!39;UBERON:0002619!8.02e-11!17;UBERON:0000956!1.50e-09!21;UBERON:0001869!1.50e-09!21;UBERON:0000203!1.50e-09!21;UBERON:0003076!3.25e-08!12;UBERON:0003057!3.25e-08!12;UBERON:0007811!8.77e-08!86|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.48e-23,10;UBERON:0000411,2.48e-23,10;UBERON:0001950,2.48e-23,10;UBERON:0002616,3.85e-19,46;UBERON:0000955,1.09e-18,47;UBERON:0006238,1.09e-18,47;UBERON:0002346,1.17e-17,64;UBERON:0003075,1.17e-17,64;UBERON:0007284,1.17e-17,64;UBERON:0003056,1.31e-17,49;UBERON:0001049,1.07e-16,52;UBERON:0005068,1.07e-16,52;UBERON:0006241,1.07e-16,52;UBERON:0007135,1.07e-16,52;UBERON:0000073,5.27e-16,54;UBERON:0003080,6.63e-16,40;UBERON:0003528,1.32e-15,29;UBERON:0002791,1.32e-15,29;UBERON:0001893,1.32e-15,29;UBERON:0010371,3.32e-15,73;UBERON:0000956,3.87e-14,21;UBERON:0001869,3.87e-14,21;UBERON:0000203,3.87e-14,21;UBERON:0002780,1.10e-13,39;UBERON:0001890,1.10e-13,39;UBERON:0006240,1.10e-13,39;UBERON:0002619,1.81e-13,17;UBERON:0001017,4.04e-13,73;UBERON:0002020,4.14e-13,34;UBERON:0004121,8.66e-13,95;UBERON:0000924,8.66e-13,95;UBERON:0006601,8.66e-13,95;UBERON:0001016,1.04e-12,75;UBERON:0010314,1.37e-11,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0.46081959976873,0.263772575460388,0.0914876436024097,0,1.11673199600552,0,0.30559649555362,0.294628585473668,0.996601765593721,0.372798891650601,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0.452167921657868,0.352766121407114,0,0,0,0,0,0,0,0,8.49064311333487,12.1479089951804,0,0,0,0,1.19832511523858,2.74500361691176,0.502617408451458,3.30266208365325,2.81287003063364,0.62336413367868,1.62241263067758,0,0,0,1.47309299120532,0,0,0,0.452114453507145,0.0680364991513279,0,0,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0.264450566663544,0,0,0.38660238396628,0.403367049246685,0.22237804384487,0.190225626112559,0,0.494096864172033,0.502670417600539,0,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.703270119553219,0,0,0,0.390438744296638,0.430846795465598,0,0.445597348164788,0,0.404810701674894,1.16902343164525,0.790575555893047,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.436725127492355,0.269728692769641,0.41326727862668,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,0.460325236507177,1.14579102687879,1.03111909406213,2.05524755931193,2.2661816921691,0.675022500231806,2.2516060161211,2.26571204492102,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0.320125762024346,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0.70990322463735,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0,0,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p23@Pde4b}} | ||
|EntrezGene=18578 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000172845_5end | |||
|description=CAGE_peak_23_at_Pde4b_5end | |||
|id=chr4:101760320..101760339,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.60e-20!71;UBERON:0003075!3.60e-20!71;UBERON:0007284!3.60e-20!71;UBERON:0001017!1.64e-19!73;UBERON:0005743!1.64e-19!73;UBERON:0001049!1.17e-18!52;UBERON:0005068!1.17e-18!52;UBERON:0006241!1.17e-18!52;UBERON:0007135!1.17e-18!52;UBERON:0000073!1.31e-18!75;UBERON:0001016!1.31e-18!75;UBERON:0002020!3.24e-16!34;UBERON:0004121!4.98e-16!102;UBERON:0000924!4.98e-16!102;UBERON:0006601!4.98e-16!102;UBERON:0000955!7.96e-16!50;UBERON:0006238!7.96e-16!50;UBERON:0002616!3.77e-15!49;UBERON:0000033!1.37e-14!63;UBERON:0002791!1.23e-12!29;UBERON:0003528!1.23e-12!29;UBERON:0001893!1.23e-12!29;UBERON:0003056!2.79e-12!49;UBERON:0002021!3.61e-12!10;UBERON:0000411!3.61e-12!10;UBERON:0001950!3.61e-12!10;UBERON:0003080!9.49e-12!40;UBERON:0002780!6.67e-11!39;UBERON:0001890!6.67e-11!39;UBERON:0006240!6.67e-11!39;UBERON:0002619!8.02e-11!17;UBERON:0000956!1.50e-09!21;UBERON:0001869!1.50e-09!21;UBERON:0000203!1.50e-09!21;UBERON:0003076!3.25e-08!12;UBERON:0003057!3.25e-08!12;UBERON:0007811!8.77e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.48e-23,10;UBERON:0000411,2.48e-23,10;UBERON:0001950,2.48e-23,10;UBERON:0002616,3.85e-19,46;UBERON:0000955,1.09e-18,47;UBERON:0006238,1.09e-18,47;UBERON:0002346,1.17e-17,64;UBERON:0003075,1.17e-17,64;UBERON:0007284,1.17e-17,64;UBERON:0003056,1.31e-17,49;UBERON:0001049,1.07e-16,52;UBERON:0005068,1.07e-16,52;UBERON:0006241,1.07e-16,52;UBERON:0007135,1.07e-16,52;UBERON:0000073,5.27e-16,54;UBERON:0003080,6.63e-16,40;UBERON:0003528,1.32e-15,29;UBERON:0002791,1.32e-15,29;UBERON:0001893,1.32e-15,29;UBERON:0010371,3.32e-15,73;UBERON:0000956,3.87e-14,21;UBERON:0001869,3.87e-14,21;UBERON:0000203,3.87e-14,21;UBERON:0002780,1.10e-13,39;UBERON:0001890,1.10e-13,39;UBERON:0006240,1.10e-13,39;UBERON:0002619,1.81e-13,17;UBERON:0001017,4.04e-13,73;UBERON:0002020,4.14e-13,34;UBERON:0004121,8.66e-13,95;UBERON:0000924,8.66e-13,95;UBERON:0006601,8.66e-13,95;UBERON:0001016,1.04e-12,75;UBERON:0010314,1.37e-11,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0.46081959976873,0.263772575460388,0.0914876436024097,0,1.11673199600552,0,0.30559649555362,0.294628585473668,0.996601765593721,0.372798891650601,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0.452167921657868,0.352766121407114,0,0,0,0,0,0,0,0,8.49064311333487,12.1479089951804,0,0,0,0,1.19832511523858,2.74500361691176,0.502617408451458,3.30266208365325,2.81287003063364,0.62336413367868,1.62241263067758,0,0,0,1.47309299120532,0,0,0,0.452114453507145,0.0680364991513279,0,0,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0.264450566663544,0,0,0.38660238396628,0.403367049246685,0.22237804384487,0.190225626112559,0,0.494096864172033,0.502670417600539,0,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.703270119553219,0,0,0,0.390438744296638,0.430846795465598,0,0.445597348164788,0,0.404810701674894,1.16902343164525,0.790575555893047,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.436725127492355,0.269728692769641,0.41326727862668,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,0.460325236507177,1.14579102687879,1.03111909406213,2.05524755931193,2.2661816921691,0.675022500231806,2.2516060161211,2.26571204492102,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0.320125762024346,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0.70990322463735,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0,0,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p23@Pde4b | |||
}} |
Revision as of 03:15, 14 September 2013
Short description: | p23@Pde4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_Pde4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 0bp_to_ENSMUST00000172845_5end |
EntrezGene: | Pde4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.48e-23 | 10 |
visual cortex | 2.48e-23 | 10 |
neocortex | 2.48e-23 | 10 |
regional part of brain | 3.85e-19 | 46 |
brain | 1.09e-18 | 47 |
future brain | 1.09e-18 | 47 |
neurectoderm | 1.17e-17 | 64 |
neural plate | 1.17e-17 | 64 |
presumptive neural plate | 1.17e-17 | 64 |
pre-chordal neural plate | 1.31e-17 | 49 |
neural tube | 1.07e-16 | 52 |
neural rod | 1.07e-16 | 52 |
future spinal cord | 1.07e-16 | 52 |
neural keel | 1.07e-16 | 52 |
regional part of nervous system | 5.27e-16 | 54 |
anterior neural tube | 6.63e-16 | 40 |
brain grey matter | 1.32e-15 | 29 |
regional part of telencephalon | 1.32e-15 | 29 |
telencephalon | 1.32e-15 | 29 |
ecto-epithelium | 3.32e-15 | 73 |
cerebral cortex | 3.87e-14 | 21 |
cerebral hemisphere | 3.87e-14 | 21 |
pallium | 3.87e-14 | 21 |
regional part of forebrain | 1.10e-13 | 39 |
forebrain | 1.10e-13 | 39 |
future forebrain | 1.10e-13 | 39 |
regional part of cerebral cortex | 1.81e-13 | 17 |
central nervous system | 4.04e-13 | 73 |
gray matter | 4.14e-13 | 34 |
ectoderm-derived structure | 8.66e-13 | 95 |
ectoderm | 8.66e-13 | 95 |
presumptive ectoderm | 8.66e-13 | 95 |
nervous system | 1.04e-12 | 75 |
structure with developmental contribution from neural crest | 1.37e-11 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.