FFCP PHASE1:Mm9::chr4:130469035..130469052,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16792|HGNC=|UniProt=Q61168|association_with_transcript=0bp_to_ENSMUST00000151698_5end|description=CAGE_peak_3_at_Laptm5_5end|id=chr4:130469035..130469052,+|ontology_enrichment_celltype=CL:0000988!3.61e-12!32;CL:0002032!3.61e-12!32;CL:0000037!3.61e-12!32;CL:0000566!3.61e-12!32;CL:0000837!3.61e-12!32;CL:0002031!1.47e-09!25;CL:0000738!3.50e-09!17;CL:0002087!3.50e-09!17;CL:0002320!1.20e-07!46;CL:0000134!1.20e-07!46;CL:0000838!3.34e-07!12;CL:0000542!5.18e-07!13;CL:0000051!5.18e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,3.04e-21,32;CL:0002032,3.04e-21,32;CL:0000037,3.04e-21,32;CL:0000837,3.04e-21,32;CL:0002031,8.03e-20,25;CL:0002320,3.55e-17,46;CL:0000134,3.55e-17,46;CL:0000738,9.61e-16,17;CL:0002087,9.61e-16,17;CL:0000219,1.83e-13,54;CL:0000838,1.73e-12,12;CL:0000542,2.56e-11,13;CL:0000051,2.56e-11,13;CL:0000049,4.28e-11,19;CL:0000084,5.57e-11,11;CL:0000827,5.57e-11,11;CL:0000839,8.76e-09,13;CL:0000791,1.17e-08,9;CL:0000789,1.17e-08,9;CL:0002420,1.17e-08,9;CL:0002419,1.17e-08,9;CL:0000790,1.17e-08,9;CL:0000034,2.19e-08,97;CL:0000763,3.78e-08,16;CL:0000553,1.18e-07,6;CL:0000556,1.18e-07,6;CL:0000624,3.13e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!9.69e-21!48;UBERON:0002390!1.13e-18!45;UBERON:0003061!1.13e-18!45;UBERON:0002405!6.46e-16!70;UBERON:0004177!3.57e-10!29;UBERON:0002371!1.52e-09!16;UBERON:0003081!1.89e-09!88;UBERON:0002370!1.02e-07!23;UBERON:0000974!1.02e-07!23;UBERON:0004807!1.02e-07!23;UBERON:0005058!1.02e-07!23;UBERON:0003351!1.02e-07!23;UBERON:0009113!1.02e-07!23;UBERON:0003295!1.02e-07!23;UBERON:0009722!1.02e-07!23;UBERON:0005562!1.02e-07!23;UBERON:0007690!1.02e-07!23;UBERON:0006562!1.14e-07!24;UBERON:0001557!1.14e-07!24;UBERON:0001042!1.14e-07!24;UBERON:0008814!1.14e-07!24;UBERON:0009145!1.14e-07!24;UBERON:0002384!1.20e-07!46;UBERON:0001474!1.49e-07!22;UBERON:0004765!1.49e-07!22;UBERON:0001434!1.49e-07!22;UBERON:0003408!5.12e-07!24;UBERON:0000072!5.19e-07!27;UBERON:0005057!5.65e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.51e-35,48;UBERON:0002405,2.51e-35,48;UBERON:0002390,3.35e-31,45;UBERON:0003061,3.35e-31,45;UBERON:0004177,3.25e-17,29;UBERON:0005057,3.25e-17,29;UBERON:0002384,3.55e-17,46;UBERON:0000077,1.53e-14,35;UBERON:0002371,1.99e-14,16;UBERON:0002370,1.09e-13,23;UBERON:0000974,1.09e-13,23;UBERON:0004807,1.09e-13,23;UBERON:0005058,1.09e-13,23;UBERON:0003351,1.09e-13,23;UBERON:0009113,1.09e-13,23;UBERON:0003295,1.09e-13,23;UBERON:0009722,1.09e-13,23;UBERON:0005562,1.09e-13,23;UBERON:0007690,1.09e-13,23;UBERON:0003081,3.83e-13,87;UBERON:0006562,6.31e-13,24;UBERON:0003408,6.31e-13,24;UBERON:0001557,6.31e-13,24;UBERON:0001042,6.31e-13,24;UBERON:0008814,6.31e-13,24;UBERON:0009145,6.31e-13,24;UBERON:0000072,5.54e-11,27;UBERON:0001474,6.15e-11,22;UBERON:0004765,6.15e-11,22;UBERON:0001434,6.15e-11,22;UBERON:0000926,1.49e-09,120;UBERON:0004120,1.49e-09,120;UBERON:0006603,1.49e-09,120;UBERON:0002204,2.89e-07,32;UBERON:0007811,3.69e-07,36|phase1_expression=0,0,0,0,0,0,0,5.81054955487093,6.335492496825,5.61754863172784,0,0.558405112967355,4.28001824828014,5.68232615723483,1.33243904726265,2.02475267389826,2.79824751251259,2.99689057090326,1.91960207048034,3.39511721438424,1.02051948181284,5.06383851124515,2.61199789138935,6.07971206614945,2.2940928106717,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.0470474879476,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,11.0736519998106,8.70434570413613,9.41062637598899,0,0,0,0,0,0,0,0,3.5995988691256,3.9554654502679,6.3943210345149,3.29560121570245,3.07374644257244,0.207379224616955,0.135005938331691,0,0.285650984403804,0,0.122490799214954,0.191690942036473,0.919218786610021,0,0.127687338085188,0.307213066512487,0.527545150920775,0,0,0.558365998002762,0,0,0.294628585473668,0.142371680799103,0,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,9.32176381129818,0,0.173485326766136,0,0,0,0,0.251333182659351,0.247194967734374,1.73519228303894,0,0.485300549842228,0.441683036920787,1.45462575940567,0,0,0,0.255457055208591,2.87556298814209,3.59941638596045,2.28726408731516,0,0,0,0,0,0,0,0,0.622034853050465,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0.187403449119458,0,0.431135985865684,0.189106080167819,0,0,0,0,0.411564272815887,0,0.702213187313235,0.772043721344145,1.70498099637356,0,0.234526059981096,0.180062061461015,0.473489471170421,0,0,0.232533944750408,0.268273401399619,0.350296027101508,0,0.164167464079095,0,0,0.439100230582101,0.134206418760372,0,0,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0.898819408654221,0,0.398282546508734,0.189667900953082,0.228497025219458,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0.83422552858047,0.393117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| ||
|EntrezGene=16792 | |||
|HGNC= | |||
|UniProt=Q61168 | |||
|association_with_transcript=0bp_to_ENSMUST00000151698_5end | |||
|description=CAGE_peak_3_at_Laptm5_5end | |||
|id=chr4:130469035..130469052,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.61e-12!32;CL:0002032!3.61e-12!32;CL:0000037!3.61e-12!32;CL:0000566!3.61e-12!32;CL:0000837!3.61e-12!32;CL:0002031!1.47e-09!25;CL:0000738!3.50e-09!17;CL:0002087!3.50e-09!17;CL:0002320!1.20e-07!46;CL:0000134!1.20e-07!46;CL:0000838!3.34e-07!12;CL:0000542!5.18e-07!13;CL:0000051!5.18e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.04e-21,32;CL:0002032,3.04e-21,32;CL:0000037,3.04e-21,32;CL:0000837,3.04e-21,32;CL:0002031,8.03e-20,25;CL:0002320,3.55e-17,46;CL:0000134,3.55e-17,46;CL:0000738,9.61e-16,17;CL:0002087,9.61e-16,17;CL:0000219,1.83e-13,54;CL:0000838,1.73e-12,12;CL:0000542,2.56e-11,13;CL:0000051,2.56e-11,13;CL:0000049,4.28e-11,19;CL:0000084,5.57e-11,11;CL:0000827,5.57e-11,11;CL:0000839,8.76e-09,13;CL:0000791,1.17e-08,9;CL:0000789,1.17e-08,9;CL:0002420,1.17e-08,9;CL:0002419,1.17e-08,9;CL:0000790,1.17e-08,9;CL:0000034,2.19e-08,97;CL:0000763,3.78e-08,16;CL:0000553,1.18e-07,6;CL:0000556,1.18e-07,6;CL:0000624,3.13e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.69e-21!48;UBERON:0002390!1.13e-18!45;UBERON:0003061!1.13e-18!45;UBERON:0002405!6.46e-16!70;UBERON:0004177!3.57e-10!29;UBERON:0002371!1.52e-09!16;UBERON:0003081!1.89e-09!88;UBERON:0002370!1.02e-07!23;UBERON:0000974!1.02e-07!23;UBERON:0004807!1.02e-07!23;UBERON:0005058!1.02e-07!23;UBERON:0003351!1.02e-07!23;UBERON:0009113!1.02e-07!23;UBERON:0003295!1.02e-07!23;UBERON:0009722!1.02e-07!23;UBERON:0005562!1.02e-07!23;UBERON:0007690!1.02e-07!23;UBERON:0006562!1.14e-07!24;UBERON:0001557!1.14e-07!24;UBERON:0001042!1.14e-07!24;UBERON:0008814!1.14e-07!24;UBERON:0009145!1.14e-07!24;UBERON:0002384!1.20e-07!46;UBERON:0001474!1.49e-07!22;UBERON:0004765!1.49e-07!22;UBERON:0001434!1.49e-07!22;UBERON:0003408!5.12e-07!24;UBERON:0000072!5.19e-07!27;UBERON:0005057!5.65e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.51e-35,48;UBERON:0002405,2.51e-35,48;UBERON:0002390,3.35e-31,45;UBERON:0003061,3.35e-31,45;UBERON:0004177,3.25e-17,29;UBERON:0005057,3.25e-17,29;UBERON:0002384,3.55e-17,46;UBERON:0000077,1.53e-14,35;UBERON:0002371,1.99e-14,16;UBERON:0002370,1.09e-13,23;UBERON:0000974,1.09e-13,23;UBERON:0004807,1.09e-13,23;UBERON:0005058,1.09e-13,23;UBERON:0003351,1.09e-13,23;UBERON:0009113,1.09e-13,23;UBERON:0003295,1.09e-13,23;UBERON:0009722,1.09e-13,23;UBERON:0005562,1.09e-13,23;UBERON:0007690,1.09e-13,23;UBERON:0003081,3.83e-13,87;UBERON:0006562,6.31e-13,24;UBERON:0003408,6.31e-13,24;UBERON:0001557,6.31e-13,24;UBERON:0001042,6.31e-13,24;UBERON:0008814,6.31e-13,24;UBERON:0009145,6.31e-13,24;UBERON:0000072,5.54e-11,27;UBERON:0001474,6.15e-11,22;UBERON:0004765,6.15e-11,22;UBERON:0001434,6.15e-11,22;UBERON:0000926,1.49e-09,120;UBERON:0004120,1.49e-09,120;UBERON:0006603,1.49e-09,120;UBERON:0002204,2.89e-07,32;UBERON:0007811,3.69e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,5.81054955487093,6.335492496825,5.61754863172784,0,0.558405112967355,4.28001824828014,5.68232615723483,1.33243904726265,2.02475267389826,2.79824751251259,2.99689057090326,1.91960207048034,3.39511721438424,1.02051948181284,5.06383851124515,2.61199789138935,6.07971206614945,2.2940928106717,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.0470474879476,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,11.0736519998106,8.70434570413613,9.41062637598899,0,0,0,0,0,0,0,0,3.5995988691256,3.9554654502679,6.3943210345149,3.29560121570245,3.07374644257244,0.207379224616955,0.135005938331691,0,0.285650984403804,0,0.122490799214954,0.191690942036473,0.919218786610021,0,0.127687338085188,0.307213066512487,0.527545150920775,0,0,0.558365998002762,0,0,0.294628585473668,0.142371680799103,0,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,9.32176381129818,0,0.173485326766136,0,0,0,0,0.251333182659351,0.247194967734374,1.73519228303894,0,0.485300549842228,0.441683036920787,1.45462575940567,0,0,0,0.255457055208591,2.87556298814209,3.59941638596045,2.28726408731516,0,0,0,0,0,0,0,0,0.622034853050465,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0.187403449119458,0,0.431135985865684,0.189106080167819,0,0,0,0,0.411564272815887,0,0.702213187313235,0.772043721344145,1.70498099637356,0,0.234526059981096,0.180062061461015,0.473489471170421,0,0,0.232533944750408,0.268273401399619,0.350296027101508,0,0.164167464079095,0,0,0.439100230582101,0.134206418760372,0,0,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0.898819408654221,0,0.398282546508734,0.189667900953082,0.228497025219458,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0.83422552858047,0.393117990226406,1.79889689907883,0.608580364165509,1.20588579876208,1.01850340712568,0.575392274901621,0.324270453550071,0.549122826376163,0,1.11642284300551,0,0,0,0,1.47802552133284,0,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.472905432318573,0,0.318909537314974,0.327726629431476,0.690739927463582,0.867894351489069,3.01582567878545,3.26343410291226,0.983528546038072,0.551873492609465,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.99358059645788,0.35613120733451,0.162886959353576,1.31976098378028,0,0,0,0.188605079755898,0,0,0,0,0,0.632073515871632,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0,0,0.469343416127421,0,0,0.32977250588296,0.161464426695906,0.301564624640779,0.238744688006273,0.164140899745061,0,0.18542530201051,1.87957968877638,0.82554747185289,1.29636169158798,1.13021074202815,1.0935538217682,1.60144721244566,6.79913719975421,8.11718423477216,7.87739850685216,0,0.474503990371703,0.203319467126849,0.324016022465404,0.209088296014469,0.655087691238533,0.404593039154462,0.247960367176008,0,0.388844919875379,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,3.47612232690996,0.202725215290164,0.821687657318618,1.81889152168913,3.40150721768215,4.76835251475036,3.12508168751919,3.39685912501528,3.33189284828887,3.88654713940499,3.42809029465258,3.80085734885034,5.19543944857779,4.79195298944433,0.226730383615211,7.76950836809226,0.717710852875806,1.00730769818447,0.386379188064381,0.563047426353546,9.89018771043231,1.07184189539533,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0,0,1.01391719956096,0.377252682772152,0.187283014939765,0.128050304809739,0.114870937911227,0.476293691283074,0.463537303779422,0,0.412085900803307,0.588795680537589,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.548783918618318,0,0.543216455383447,0,0.237270036248348,0.29551344712669,0,0.154936841185966,0,0.249810577937946,0,0,0.191288332068843,1.32354851471709,0.695603506861264 | |||
|short_description=p3@Laptm5 | |||
}} |
Revision as of 03:56, 14 September 2013
Short description: | p3@Laptm5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Laptm5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000151698_5end |
EntrezGene: | Laptm5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.04e-21 | 32 |
hematopoietic oligopotent progenitor cell | 3.04e-21 | 32 |
hematopoietic stem cell | 3.04e-21 | 32 |
hematopoietic multipotent progenitor cell | 3.04e-21 | 32 |
hematopoietic lineage restricted progenitor cell | 8.03e-20 | 25 |
connective tissue cell | 3.55e-17 | 46 |
mesenchymal cell | 3.55e-17 | 46 |
leukocyte | 9.61e-16 | 17 |
nongranular leukocyte | 9.61e-16 | 17 |
motile cell | 1.83e-13 | 54 |
lymphoid lineage restricted progenitor cell | 1.73e-12 | 12 |
lymphocyte | 2.56e-11 | 13 |
common lymphoid progenitor | 2.56e-11 | 13 |
common myeloid progenitor | 4.28e-11 | 19 |
T cell | 5.57e-11 | 11 |
pro-T cell | 5.57e-11 | 11 |
myeloid lineage restricted progenitor cell | 8.76e-09 | 13 |
mature alpha-beta T cell | 1.17e-08 | 9 |
alpha-beta T cell | 1.17e-08 | 9 |
immature T cell | 1.17e-08 | 9 |
mature T cell | 1.17e-08 | 9 |
immature alpha-beta T cell | 1.17e-08 | 9 |
stem cell | 2.19e-08 | 97 |
myeloid cell | 3.78e-08 | 16 |
megakaryocyte progenitor cell | 1.18e-07 | 6 |
megakaryocyte | 1.18e-07 | 6 |
CD4-positive, alpha-beta T cell | 3.13e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.