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FFCP PHASE1:Mm9::chr4:44246754..44246821,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=73469|HGNC=|UniProt=|association_with_transcript=-93bp_to_ENSMUST00000153116_5end|description=CAGE_peak_1_at_Rnf38_5end|id=chr4:44246754..44246821,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.21e-10!63;UBERON:0004121!8.47e-10!102;UBERON:0000924!8.47e-10!102;UBERON:0006601!8.47e-10!102;UBERON:0003056!1.29e-09!49;UBERON:0001017!8.33e-09!73;UBERON:0005743!8.33e-09!73;UBERON:0002346!1.63e-08!71;UBERON:0003075!1.63e-08!71;UBERON:0007284!1.63e-08!71;UBERON:0000955!2.73e-08!50;UBERON:0006238!2.73e-08!50;UBERON:0001049!3.48e-08!52;UBERON:0005068!3.48e-08!52;UBERON:0006241!3.48e-08!52;UBERON:0007135!3.48e-08!52;UBERON:0000073!7.04e-08!75;UBERON:0001016!7.04e-08!75;UBERON:0002616!7.26e-08!49;UBERON:0003080!1.53e-07!40;UBERON:0002791!2.13e-07!29;UBERON:0003528!2.13e-07!29;UBERON:0001893!2.13e-07!29;UBERON:0002780!4.15e-07!39;UBERON:0001890!4.15e-07!39;UBERON:0006240!4.15e-07!39;UBERON:0002020!7.74e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.58e-11,95;UBERON:0000924,5.58e-11,95;UBERON:0006601,5.58e-11,95;UBERON:0010371,5.69e-11,73;UBERON:0002346,5.80e-10,64;UBERON:0003075,5.80e-10,64;UBERON:0007284,5.80e-10,64;UBERON:0003056,1.29e-09,49;UBERON:0001017,8.33e-09,73;UBERON:0000955,1.33e-08,47;UBERON:0006238,1.33e-08,47;UBERON:0010314,3.00e-08,92;UBERON:0001049,3.48e-08,52;UBERON:0005068,3.48e-08,52;UBERON:0006241,3.48e-08,52;UBERON:0007135,3.48e-08,52;UBERON:0002616,3.64e-08,46;UBERON:0001016,7.04e-08,75;UBERON:0000073,1.45e-07,54;UBERON:0003080,1.53e-07,40;UBERON:0003528,2.13e-07,29;UBERON:0002791,2.13e-07,29;UBERON:0001893,2.13e-07,29;UBERON:0002780,4.15e-07,39;UBERON:0001890,4.15e-07,39;UBERON:0006240,4.15e-07,39;UBERON:0002020,7.74e-07,34|phase1_expression=18.7374151112609,8.02643437570531,11.3749809847384,14.8207463540347,8.01433167914156,6.88305014838748,5.60670337429262,6.97265946584512,5.91312633037,5.38348410540585,0.856089841127525,2.39316476986009,6.16322627752341,5.33264454755884,1.33243904726265,1.61980213911861,0,4.41647031501533,5.34746291062381,3.39511721438424,12.6714502325094,1.39007331681239,1.56719873483361,2.71987118748791,3.44113921600755,4.59385571292016,6.03066794622705,7.97243560937789,2.47030445293286,2.77233142735924,4.6563407237614,3.17515336729816,1.23012957516914,0,3.46621943701529,1.99481574430191,2.24586291888606,20.5080499061085,8.5946887897618,14.1351410872926,17.6469446409304,15.0270006690858,14.5653105909346,5.16176953699867,7.19776211658553,7.52541683862894,14.0830441982647,3.70642765846759,5.93152693383074,5.44403717407994,6.7193482380174,2.87505128729943,5.36904339384756,10.8804321301702,12.4354705682712,8.2323019531503,11.747871037489,14.9544906760458,18.613114399083,7.40587370980846,17.747279298173,6.77689064138264,6.22506357277798,8.09909745553259,12.8552627133707,7.8152812644071,7.49000276296012,7.30014780110954,14.7239249478038,12.1505344498522,11.567872874326,7.42692559449889,7.73039893330647,13.8414603112898,13.9934387686625,16.5459381589804,9.91042928994498,12.6410464704336,10.2916377281683,20.3104883104499,18.8464545820964,18.7528813400434,7.2587579740359,11.8180148106653,12.9878510610289,12.6690291753677,11.6744778255264,18.6399445825301,3.71058347332602,5.44115232768856,11.8844440367688,12.0459342777394,6.11974200336975,5.39703191637817,5.19821133958135,8.51251085484938,8.14577636764161,4.26075806445144,2.59786004602869,5.3000936176551,12.8167511996779,3.84979432242953,17.8363667794652,35.5533351576666,3.030874574157,3.54703811665138,5.05524445014783,8.5637909789295,21.2329064590681,12.6175818205101,7.80683970447611,5.78484408793068,8.07154240396205,6.78251882486802,15.4041206347773,7.6656620711102,23.9779118702343,17.3519228303894,7.96149496754887,11.6472131962135,10.8212344045593,6.30337829075789,11.1835056730873,19.6163133997737,16.127396424636,6.64188343542338,2.63593273913025,1.79970819298022,4.19331749341113,19.9221550408414,18.3000241127451,20.2303506901712,17.9039049798045,18.6672283851141,16.2074674756457,15.2506787283692,14.2575109390443,11.1966273549084,12.8888606801174,12.6265113531884,14.5734896118228,10.3455946995063,15.8454674228707,19.4409215008072,23.4045557080568,16.6547836370305,20.6143794031403,11.9003550539947,10.1316956678436,17.5868654556072,13.1963343122962,10.0830036916684,14.1804097105055,12.1888258282758,16.2567887762275,12.7381930763836,2.80885274925294,1.54408744268829,4.26245249093389,11.3919174894526,7.73935997937617,7.56260658136262,11.6004920436753,11.0187969778546,9.56456099901745,10.9290954032692,13.413670069981,12.0268302638185,11.1900697941167,9.52171291658752,15.9705554805336,8.77199924551994,9.66020507280623,14.3600868073598,13.4585567081041,18.4199256158919,7.93005079161115,5.28901133327089,12.3707185310436,11.147360249301,11.4692040576663,8.67239155880373,8.89512175379481,8.56015317506516,5.69434873853414,7.08205505313247,6.78605063760728,10.3457365461398,10.138132530194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|EntrezGene=73469
|HGNC=
|UniProt=
|association_with_transcript=-93bp_to_ENSMUST00000153116_5end
|description=CAGE_peak_1_at_Rnf38_5end
|id=chr4:44246754..44246821,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.58e-11,95;UBERON:0000924,5.58e-11,95;UBERON:0006601,5.58e-11,95;UBERON:0010371,5.69e-11,73;UBERON:0002346,5.80e-10,64;UBERON:0003075,5.80e-10,64;UBERON:0007284,5.80e-10,64;UBERON:0003056,1.29e-09,49;UBERON:0001017,8.33e-09,73;UBERON:0000955,1.33e-08,47;UBERON:0006238,1.33e-08,47;UBERON:0010314,3.00e-08,92;UBERON:0001049,3.48e-08,52;UBERON:0005068,3.48e-08,52;UBERON:0006241,3.48e-08,52;UBERON:0007135,3.48e-08,52;UBERON:0002616,3.64e-08,46;UBERON:0001016,7.04e-08,75;UBERON:0000073,1.45e-07,54;UBERON:0003080,1.53e-07,40;UBERON:0003528,2.13e-07,29;UBERON:0002791,2.13e-07,29;UBERON:0001893,2.13e-07,29;UBERON:0002780,4.15e-07,39;UBERON:0001890,4.15e-07,39;UBERON:0006240,4.15e-07,39;UBERON:0002020,7.74e-07,34
|phase1_expression=18.7374151112609,8.02643437570531,11.3749809847384,14.8207463540347,8.01433167914156,6.88305014838748,5.60670337429262,6.97265946584512,5.91312633037,5.38348410540585,0.856089841127525,2.39316476986009,6.16322627752341,5.33264454755884,1.33243904726265,1.61980213911861,0,4.41647031501533,5.34746291062381,3.39511721438424,12.6714502325094,1.39007331681239,1.56719873483361,2.71987118748791,3.44113921600755,4.59385571292016,6.03066794622705,7.97243560937789,2.47030445293286,2.77233142735924,4.6563407237614,3.17515336729816,1.23012957516914,0,3.46621943701529,1.99481574430191,2.24586291888606,20.5080499061085,8.5946887897618,14.1351410872926,17.6469446409304,15.0270006690858,14.5653105909346,5.16176953699867,7.19776211658553,7.52541683862894,14.0830441982647,3.70642765846759,5.93152693383074,5.44403717407994,6.7193482380174,2.87505128729943,5.36904339384756,10.8804321301702,12.4354705682712,8.2323019531503,11.747871037489,14.9544906760458,18.613114399083,7.40587370980846,17.747279298173,6.77689064138264,6.22506357277798,8.09909745553259,12.8552627133707,7.8152812644071,7.49000276296012,7.30014780110954,14.7239249478038,12.1505344498522,11.567872874326,7.42692559449889,7.73039893330647,13.8414603112898,13.9934387686625,16.5459381589804,9.91042928994498,12.6410464704336,10.2916377281683,20.3104883104499,18.8464545820964,18.7528813400434,7.2587579740359,11.8180148106653,12.9878510610289,12.6690291753677,11.6744778255264,18.6399445825301,3.71058347332602,5.44115232768856,11.8844440367688,12.0459342777394,6.11974200336975,5.39703191637817,5.19821133958135,8.51251085484938,8.14577636764161,4.26075806445144,2.59786004602869,5.3000936176551,12.8167511996779,3.84979432242953,17.8363667794652,35.5533351576666,3.030874574157,3.54703811665138,5.05524445014783,8.5637909789295,21.2329064590681,12.6175818205101,7.80683970447611,5.78484408793068,8.07154240396205,6.78251882486802,15.4041206347773,7.6656620711102,23.9779118702343,17.3519228303894,7.96149496754887,11.6472131962135,10.8212344045593,6.30337829075789,11.1835056730873,19.6163133997737,16.127396424636,6.64188343542338,2.63593273913025,1.79970819298022,4.19331749341113,19.9221550408414,18.3000241127451,20.2303506901712,17.9039049798045,18.6672283851141,16.2074674756457,15.2506787283692,14.2575109390443,11.1966273549084,12.8888606801174,12.6265113531884,14.5734896118228,10.3455946995063,15.8454674228707,19.4409215008072,23.4045557080568,16.6547836370305,20.6143794031403,11.9003550539947,10.1316956678436,17.5868654556072,13.1963343122962,10.0830036916684,14.1804097105055,12.1888258282758,16.2567887762275,12.7381930763836,2.80885274925294,1.54408744268829,4.26245249093389,11.3919174894526,7.73935997937617,7.56260658136262,11.6004920436753,11.0187969778546,9.56456099901745,10.9290954032692,13.413670069981,12.0268302638185,11.1900697941167,9.52171291658752,15.9705554805336,8.77199924551994,9.66020507280623,14.3600868073598,13.4585567081041,18.4199256158919,7.93005079161115,5.28901133327089,12.3707185310436,11.147360249301,11.4692040576663,8.67239155880373,8.89512175379481,8.56015317506516,5.69434873853414,7.08205505313247,6.78605063760728,10.3457365461398,10.1381325301942,5.39291645192533,8.86166004486246,7.96565093017469,8.53505554288868,10.2823661348756,16.9061603509621,13.6446389656361,11.8311017172252,14.307707257625,15.4297150583188,9.59465961867414,7.53593893638599,9.74837594982224,2.66807364378434,7.50802975722423,8.64859578498093,7.19558759631532,8.11440485554012,6.27060615356284,4.83789118384698,10.64475708568,9.72811360650212,4.66754402419738,50.3188722845741,11.9085103253921,7.17686648163489,8.5876818502018,5.38192240565737,5.78932225636041,16.2582807346612,8.7166049414423,12.87423313892,10.6939404038369,13.1426539041561,20.1007508930179,29.5174114698657,29.2700471786698,26.1674339216277,23.2537924131214,31.412589425525,16.7140581010053,19.1680329871144,22.5652531387158,12.0633027151418,9.24639662491806,9.83528546038072,12.9690270763224,15.7339578188036,13.3621322715112,3.93443868904021,9.84636616097055,7.88770548540642,8.98009111882268,15.2950612390287,16.7278158566786,18.4922899488387,31.1384183867716,10.5250782435473,14.6127928955656,20.9502522311657,19.921921618152,17.6005705658253,9.61554259803178,16.9402437727719,16.8269525431986,10.619611067197,4.61283208694465,3.93020624054176,7.73280826999182,5.02013217897314,7.68587869859819,13.4382712447475,12.3601468022352,8.91243445961803,6.95280867458795,5.27093042874994,13.4076206222643,8.5109901438447,15.665315180724,10.0899773350549,11.1455258216428,12.0591358876746,11.4156043265325,11.3538824215463,10.9607381681256,20.1817668934791,35.5877879051218,4.85162475720916,19.2916915941532,20.50598219038,13.5704081088351,10.0272768962635,8.20704498725306,11.659233465194,18.7279555030615,8.88528580148834,10.1129565301979,10.3708935327039,3.20226376907975,3.55404992074665,4.34678529092393,4.9293744698218,4.3384950220334,6.21899882119907,12.4107180341965,12.4952717464548,10.9792512248498,9.39646465149671,8.78170843260769,8.29777742235475,8.90104686139817,12.067404535899,5.49687478166462,8.16574331738295,9.94142900939081,11.2738587736838,12.2603567756063,7.1147150896552,12.250424865675,10.4619457016962,13.8544022902438,18.7771581833206,18.7494314175288,19.9232754408851,12.5623742829523,8.3528701814781,4.4241556887945,5.0681303822541,4.5192821152524,3.63778304337826,5.01274747868948,6.35780335300048,4.32703618271888,4.72606486958647,3.12995994839258,3.20068587950999,4.83965688656834,5.06780979846713,4.61816839873581,4.55819918508119,11.5632495643758,17.5368903165511,21.2621840164457,28.0367309328011,16.4211154927362,11.8239959534245,11.1722490803032,10.7184189539533,8.02515366456581,19.7663144915973,18.8733346967943,23.4887160510153,18.9038500578056,23.9778881919725,16.6186657425734,14.1754725048679,17.5625269257446,19.4851235863208,25.888015587591,11.3128208866753,21.9463680370567,12.4635532200518,13.1277627216879,10.4806581313991,13.604419625301,10.8900896622791,13.8043488350059,12.5158491740808,12.8875577999537,12.1670063947315,11.1289541417785,13.2034525532534,15.4940868819784,14.0142544251696,11.9073422820768,17.614417543618,12.1532808892134,13.5988347265091,13.2479028120958,14.4005086001874,13.665637074269,12.8755542571553,13.9532559967035,13.2694226385616,13.5383372626682,11.8903182367302,12.6273461490165,9.91370031074791,19.6399795080208,13.9989321386525,14.4801589092078,7.36615877705441,11.1554525653896,14.0821826016233,13.2399606307111,12.3983752476066,13.5368764050428,16.8333732220582,11.2501623750953,9.27471342481686
|short_description=p1@Rnf38
}}

Revision as of 05:03, 14 September 2013

Short description:p1@Rnf38
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rnf38_5end
Coexpression cluster:NA
Association with transcript: -93bp_to_ENSMUST00000153116_5end
EntrezGene:Rnf38
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Rnf38

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G718.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.03
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I611.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I314.82
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.61
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.38
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.16
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.33
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.35
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.44
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I27.97
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.47
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G820.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H314.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G917.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.03
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.16
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.53
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.93
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.72
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.37
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.88
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.44
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.23
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.95
Mouse Granule cells, donor1.CNhs12131.11713-123C318.61
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C717.75
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.78
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C87.49
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.72
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.15
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.99
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D420.31
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.85
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.75
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.67
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.64
Mouse Schwann, donor1.CNhs12507.11728-123D93.71
Mouse Schwann, donor2.CNhs12573.11746-123F95.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.88
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.30
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.56
accessory axillary lymph node, adult.CNhs10475.1063-29H921.23
adrenal gland, adult.CNhs10508.49-24D712.62
adrenal gland, embryo E14.CNhs11038.406-44C57.81
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I18.07
adrenal gland, embryo E18.CNhs11026.1262-18F56.78
adrenal gland, neonate N00.CNhs11191.1311-23C115.40
adrenal gland, neonate N25.CNhs11223.1377-27I37.67
amnion, adult pregnant day17.5.CNhs10488.583-22A823.98
aorta, adult.CNhs10498.46-23H117.35
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F511.65
bone (os femoris), neonate N16.CNhs11225.1525-43A610.82
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B219.62
cerebellum, neonate N30.CNhs11135.1395-42I216.13
colon, adult.CNhs10468.36-18H76.64
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.19
corpora quadrigemina, adult.CNhs10501.16-22A419.92
corpus striatum, adult.CNhs10487.19-21D818.30
corpus striatum, neonate N00.CNhs11226.630-43F120.23
cortex, adult.CNhs10473.12-14D517.90
cortex, neonate N30.CNhs11107.1392-42F218.67
diencephalon, adult.CNhs10482.20-12F216.21
diencephalon, neonate N30.CNhs11201.1388-42B215.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.26
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.20
epididymis, adult.CNhs10490.58-23B212.89
eyeball, adult.CNhs10484.31-12G412.63
eyeball, embryo E12.CNhs11016.345-16C614.57
eyeball, embryo E14.CNhs10521.399-16E210.35
eyeball, embryo E15.CNhs10593.426-16C915.85
eyeball, embryo E17.CNhs11023.1261-18D419.44
eyeball, neonate N00.CNhs11207.633-15C623.40
eyeball, neonate N01.CNhs11140.1532-43E716.65
eyeball, neonate N02.CNhs11205.1551-44G820.61
eyeball, neonate N16.CNhs11188.777-19A211.90
forelimb, embryo E11.CNhs10596.335-25E210.13
forelimb, embryo E12.CNhs10600.359-14H217.59
forelimb, embryo E13.CNhs10589.384-1E213.20
forelimb, embryo E14.CNhs10577.413-26A810.08
forelimb, embryo E15.CNhs11007.437-20E714.18
forelimb, embryo E17.CNhs10598.1517-43C412.19
forelimb, embryo E18.CNhs11008.1520-43B516.26
gonad, embryo E13.CNhs11044.1564-45I612.74
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.26
heart, embryo E11.CNhs10586.331-24E911.39
heart, embryo E12.CNhs11015.353-12F57.74
heart, embryo E13.CNhs11013.376-3I97.56
heart, embryo E14.CNhs10597.403-26D411.60
heart, embryo E15.CNhs11017.431-16C811.02
heart, embryo E16.CNhs11021.457-17C69.56
heart, embryo E17.CNhs11025.479-18E510.93
heart, embryo E18.CNhs11030.1283-20G313.41
heart, neonate N00.CNhs11213.639-21E312.03
heart, neonate N03.CNhs11221.1349-25I211.19
heart, neonate N10.CNhs11118.749-24G19.52
heart, neonate N16.CNhs11209.782-15G115.97
heart, neonate N20.CNhs11127.821-26I68.77
heart, neonate N25.CNhs11196.1351-25D39.66
heart, neonate N30.CNhs11202.1390-42D214.36
hippocampus, adult.CNhs10478.13-16E813.46
hippocampus, neonate N00.CNhs11228.627-43G118.42
intestinal mucosa, adult.CNhs10506.860-29I37.93
intestine, adult.CNhs10496.178-9A35.29
intestine, embryo E12.CNhs11019.1251-16I512.37
intestine, embryo E13.CNhs11010.381-16D511.15
intestine, embryo E15.CNhs10602.976-16D811.47
intestine, embryo E16.CNhs10585.463-22H48.67
intestine, embryo E17.CNhs10582.482-18D38.90
intestine, embryo E18.CNhs10526.1289-20F78.56
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E97.08
intestine, neonate N06.CNhs11102.688-20B86.79
intestine, neonate N07.CNhs11095.720-20F210.35
intestine, neonate N10.CNhs11098.755-23A510.14
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E38.86
intestine, neonate N30.CNhs11131.1384-42G17.97
kidney, embryo E14.CNhs10606.411-4I98.54
kidney, embryo E15.CNhs10997.434-16F810.28
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I213.64
kidney, embryo E18.CNhs11001.1288-20C711.83
kidney, neonate N00.CNhs11214.646-21G714.31
kidney, neonate N10.CNhs11206.758-6D515.43
kidney, neonate N20.CNhs11113.832-19I19.59
kidney, neonate N25.CNhs11122.1353-25F37.54
kidney, neonate N30.CNhs11203.1385-42H19.75
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F87.51
liver, embryo E13.CNhs10524.378-3H68.65
liver, embryo E14.CNhs10594.409-16E17.20
liver, embryo E15.CNhs10520.433-16D78.11
liver, embryo E16.CNhs10523.462-17F56.27
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G410.64
liver, neonate N00.CNhs11117.641-24F49.73
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A850.32
liver, neonate N07.CNhs11103.716-20H211.91
liver, neonate N10.CNhs11115.751-24B97.18
liver, neonate N20.CNhs11220.823-25A38.59
liver, neonate N25.CNhs11198.1368-26H15.38
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B116.26
lung, embryo E12.CNhs10522.354-16G28.72
lung, embryo E14.CNhs10604.404-26F812.87
lung, embryo E15.CNhs11020.432-17C510.69
lung, embryo E16.CNhs10998.458-17B613.14
lung, embryo E17.CNhs10605.480-44A620.10
lung, embryo E18.CNhs10583.1287-20I629.52
lung, neonate N00.CNhs11224.640-42C629.27
lung, neonate N06.CNhs11212.683-20E526.17
lung, neonate N07.CNhs11111.715-19A323.25
lung, neonate N10.CNhs11219.750-23E631.41
lung, neonate N20.CNhs11109.822-18A416.71
lung, neonate N25.CNhs11119.1359-25C719.17
lung, neonate N30.CNhs11133.1394-42H222.57
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.25
mammary gland, adult lactating day02.CNhs10480.595-22B69.84
mammary gland, adult pregnant day19.CNhs10476.588-5H212.97
medulla oblongata, adult.CNhs10477.17-12C215.73
medulla oblongata, neonate N30.CNhs11200.1396-42A313.36
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.85
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.30
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.73
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.49
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D931.14
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.53
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.61
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.95
olfactory brain, adult.CNhs10489.18-22I919.92
ovary, adult.CNhs10507.91-2I717.60
ovary, embryo E18.CNhs11040.505-44H79.62
ovary, neonate N00.CNhs11217.1299-22I416.94
oviduct, adult pregnant day01.CNhs10500.988-6G616.83
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E57.73
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I77.69
pancreas, neonate N00.CNhs11105.645-26G913.44
pancreas, neonate N01.CNhs11138.1531-43D712.36
pancreas, neonate N02.CNhs11139.1539-43D88.91
pancreas, neonate N16.CNhs11136.787-43B66.95
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G88.51
pituitary gland, embryo E12.CNhs11018.346-16E615.67
pituitary gland, embryo E13.CNhs11009.370-44C710.09
pituitary gland, embryo E14.CNhs11037.398-44A511.15
pituitary gland, embryo E15.CNhs10592.427-16B912.06
pituitary gland, embryo E16.CNhs11036.449-43F611.42
pituitary gland, embryo E17.CNhs11039.1265-44F511.35
pituitary gland, neonate N00.CNhs11190.1308-22E910.96
placenta, adult pregnant day10.CNhs10472.539-13I720.18
placenta, adult pregnant day17.CNhs10464.577-18G335.59
prostate, adult.CNhs10470.859-1F84.85
skin, adult.CNhs10492.30-1C319.29
skin, neonate N00.CNhs11124.650-25G420.51
skin, neonate N03.CNhs11215.662-22H313.57
skin, neonate N06.CNhs11097.693-20I510.03
skin, neonate N10.CNhs11108.762-6C48.21
small intestine, neonate N16.CNhs11114.790-21I111.66
spinal cord, adult.CNhs10505.24-13C918.73
spleen, adult.CNhs10465.25-2G28.89
spleen, embryo E16.CNhs11035.461-43C110.11
spleen, embryo E18.CNhs11011.1271-21F210.37
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H13.55
spleen, neonate N25.CNhs11099.1354-25G34.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.22
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E312.50
stomach, embryo E15.CNhs10603.1252-16G810.98
stomach, embryo E16.CNhs11022.459-17D49.40
stomach, embryo E17.CNhs11006.1035-18D58.78
stomach, embryo E18.CNhs10999.1286-20C68.30
stomach, neonate N03.CNhs11193.1340-24B88.90
stomach, neonate N07.CNhs11210.718-18A912.07
stomach, neonate N25.CNhs11104.1355-25E45.50
stomach, neonate N30.CNhs11134.1386-42I18.17
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G511.27
testis, embryo E13.CNhs11031.389-23F512.26
testis, embryo E15.CNhs11034.443-27C57.11
testis, embryo E16.CNhs11033.470-26G512.25
testis, embryo E17.CNhs11029.486-18I510.46
testis, embryo E18.CNhs11027.503-18G513.85
testis, neonate N00.CNhs11189.1300-22B718.78
testis, neonate N07.CNhs11222.726-26I418.75
testis, neonate N10.CNhs11204.763-44D919.92
testis, neonate N20.CNhs11110.839-18H312.56
testis, neonate N30.CNhs11130.1391-42E28.35
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I24.52
thymus, embryo E16.CNhs11002.456-26C53.64
thymus, embryo E17.CNhs10581.478-18C15.01
thymus, embryo E18.CNhs10595.1273-19G46.36
thymus, neonate N02.CNhs11181.1541-43F84.33
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C43.13
thymus, neonate N07.CNhs11211.713-19D33.20
thymus, neonate N10.CNhs11194.748-24E44.84
thymus, neonate N20.CNhs11186.820-7A25.07
thymus, neonate N25.CNhs11125.1362-25G74.62
thymus, neonate N30.CNhs11132.1393-42G24.56
tongue, adult.CNhs10499.32-1B411.56
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H317.54
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F721.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G528.04
urinary bladder, adult.CNhs10481.879-12E416.42
uterus, adult pregnant day19.CNhs10497.590-15F511.82
uterus, adult.CNhs10509.92-27E511.17
vagina, adult.CNhs10502.89-27D510.72
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.77
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A323.49
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.90
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A516.62
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A925.89
whole body, embryo E11.CNhs11014.324-5I811.31
whole body, embryo E12.CNhs10587.857-27C921.95
whole body, embryo E13.CNhs10512.372-23H212.46
whole body, embryo E14.5.CNhs10578.420-27D213.13
whole body, embryo E14.CNhs10519.395-14B110.48
whole body, embryo E16.CNhs10514.453-14F213.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.20
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.49
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.61
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.15
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.25
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.95
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.27
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.16
whole body, embryo E17.5.CNhs10513.490-9F914.08
whole body, embryo E17.CNhs10517.475-3I513.24
whole body, embryo E18.CNhs10516.493-3B312.40
whole body, neonate N00.CNhs10525.657-19C213.54
whole body, neonate N01.CNhs10576.659-23C616.83
whole body, neonate N06.CNhs10515.692-21D111.25
whole body, neonate N10.CNhs10518.761-6B49.27





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure5.58e-1195
ectoderm5.58e-1195
presumptive ectoderm5.58e-1195
ecto-epithelium5.69e-1173
neurectoderm5.80e-1064
neural plate5.80e-1064
presumptive neural plate5.80e-1064
pre-chordal neural plate1.29e-0949
central nervous system8.33e-0973
brain1.33e-0847
future brain1.33e-0847
structure with developmental contribution from neural crest3.00e-0892
neural tube3.48e-0852
neural rod3.48e-0852
future spinal cord3.48e-0852
neural keel3.48e-0852
regional part of brain3.64e-0846
nervous system7.04e-0875
regional part of nervous system1.45e-0754
anterior neural tube1.53e-0740
brain grey matter2.13e-0729
regional part of telencephalon2.13e-0729
telencephalon2.13e-0729
regional part of forebrain4.15e-0739
forebrain4.15e-0739
future forebrain4.15e-0739
gray matter7.74e-0734







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