FFCP PHASE1:Mm9::chr5:143665480..143665529,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=462|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:143665480..143665529,-|id=chr5:143665480..143665529,-|ontology_enrichment_celltype=CL:0000144!5.89e-20!121;CL:0000012!5.89e-20!121;CL:0002371!6.93e-20!118;CL:0000548!4.32e-18!115;CL:0000004!4.32e-18!115;CL:0000255!4.32e-18!115;CL:0000063!3.01e-13!66;CL:0000219!4.39e-13!54;CL:0000034!7.35e-11!97;CL:0000723!3.34e-10!91;CL:0000048!3.34e-10!91;CL:0002320!9.49e-10!46;CL:0000134!9.49e-10!46;CL:0002031!4.29e-08!25;CL:0000738!8.95e-08!17;CL:0002087!8.95e-08!17;CL:0002321!2.58e-07!70;CL:0000220!2.58e-07!70;CL:0000988!8.45e-07!32;CL:0002032!8.45e-07!32;CL:0000037!8.45e-07!32;CL:0000566!8.45e-07!32;CL:0000837!8.45e-07!32|ontology_enrichment_celltype_v019_2=CL:0000219,4.19e-13,54;CL:0000034,6.86e-11,97;CL:0000723,3.12e-10,91;CL:0000048,3.12e-10,91;CL:0002320,9.09e-10,46;CL:0000134,9.09e-10,46;CL:0002031,4.07e-08,25;CL:0000738,8.94e-08,17;CL:0002087,8.94e-08,17;CL:0002321,2.50e-07,70;CL:0000988,8.11e-07,32;CL:0002032,8.11e-07,32;CL:0000037,8.11e-07,32;CL:0000837,8.11e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!9.49e-10!46;UBERON:0002193!1.57e-08!48;UBERON:0002390!2.12e-08!45;UBERON:0003061!2.12e-08!45;UBERON:0002204!9.06e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.09e-10,46;UBERON:0002193,1.54e-08,48;UBERON:0002405,1.54e-08,48;UBERON:0002390,2.12e-08,45;UBERON:0003061,2.12e-08,45;UBERON:0002204,9.06e-07,32|phase1_expression=4.96461426024861,8.02643437570531,9.55498402718026,14.215817931421,18.5331420080148,5.37213670118047,11.4470193891808,18.2063886052623,10.98152032783,9.12851652655775,11.8140398075598,8.61539317149633,15.0656642339461,18.5331253128274,9.32707333083856,7.69406016081339,9.79386629379405,17.192688012024,17.4135330679288,7.63901373236454,3.40173160604279,12.3120779489098,11.4927907221132,23.998863419011,28.9055694144634,13.7815671387605,14.6459078694085,14.0056301245828,37.2445902134493,16.6339885641554,10.6430645114546,6.98533740805594,7.38077745101484,0,3.75507105676657,3.32469290716985,2.85837098767317,46.8755426425337,31.253413780952,31.4114246384279,55.2937598749153,57.3758207365094,36.8987868303677,13.8486499773135,15.2065396829272,32.6713218847793,17.9950009200049,34.665999864491,10.3252505885202,20.8039992009483,12.5987779462826,28.7505128729943,26.0063039389491,15.9579671242496,17.1407837562657,37.5598776612483,24.6418758347331,28.8776371675368,6.06949382578793,8.46385566835253,5.70448263155561,11.8595586224196,25.789549087223,90.4399215867806,60.3208481165854,87.3890541383703,68.3088251981963,56.4800908822685,7.67303131082735,15.1206650931494,8.62332341540666,13.9968982357864,14.7981922437581,5.51208596467293,8.91362880469598,19.3035945188104,0,4.97980618532232,5.52983519722476,5.01167893374737,8.78281378583133,5.2091337055676,9.77140496504833,3.37657566019008,2.29197371665215,11.7851434189467,11.8168495063255,4.28718725398191,15.3724172466364,12.1670211771925,15.9425468785923,1.72084775396277,17.6792546764015,10.7940638327563,3.24888208723835,2.24013443548668,2.38755514223978,13.2935651610885,30.3949625385356,28.9738451098479,5.35204995151386,19.2489716121477,10.1922095882658,21.3320010945999,43.514699243254,42.5644573998166,39.9364311561679,8.22123933977232,0.258937883647172,4.15637989381509,8.50078101154066,4.87144765299426,6.91846491768175,3.16517545160507,2.58695155698551,1.75933227861546,8.65182387070309,1.01219549843938,2.65383165584962,2.75003644910596,3.09178125844551,4.84875253135222,1.86391761218122,1.17112318804619,3.56059401582874,13.0283098156382,10.7833612055328,1.19980546198682,9.78440748462598,1.04853447583376,1.37250180845588,4.14659361972453,1.73824320192276,1.02286182932132,1.45451631191692,1.29793010454206,3.46253837091075,5.22509276562391,3.0326731012041,1.05220927943237,5.46505860443356,3.67843367093557,2.16074555766419,4.37043971723574,1.49680298132921,2.69038812598185,4.12287588062807,1.81092359517311,3.88022387279116,3.21480336285293,3.51902248327898,6.57587197282724,2.22437799380478,3.1342694986995,3.08673204611915,7.36426787228425,2.80885274925294,4.37491442095016,9.37739548005456,3.93538967817454,2.34526059981096,4.32148947506436,0.710234206755631,2.75469924446365,2.77680803197281,0.697601834251224,2.68273401399619,2.33530684734339,1.81015834904829,2.62667942526552,0.729619285912702,3.50879969820798,3.51280184465681,1.07365135008297,1.26173969138476,2.88132914661996,16.1905203662061,7.1401652999157,5.54549451391608,5.80591679651096,1.54640953586512,3.22693639397348,6.22658522765637,9.13083005340284,14.2358718463353,11.3642278759568,10.8074139784116,8.35617182572834,8.38345574612217,8.08937467788799,13.8328351919804,8.16479220342906,7.39704813717019,4.11294645395024,0,6.51684249105006,2.32742984601151,2.87556861550306,2.15004226222475,1.18088118383682,2.04098346193787,2.09775178667061,1.77871576252289,3.83743743147016,5.89676985339609,4.04751802292737,4.86864291332407,6.75296047306767,8.65727896056827,3.45235364940973,6.64754429777645,12.6298250066517,18.6898668485561,5.20997326735905,4.36852742360385,3.53610429125956,4.12614051100398,3.85954817090694,5.17308932466493,4.35830247072115,2.77040459951444,6.45031325945715,7.97946844180907,4.02015017860358,3.80869825417622,5.65887578787617,2.04925687338048,3.98636441367795,2.07291199254733,6.06294264448231,8.46156411142888,5.78596234326046,72.3798162908507,112.588476550473,2.45882136509518,4.13905119457099,0.481651769963376,1.64096361229084,5.57378814280696,1.76729649043061,3.47059041357882,5.0757036758563,4.09304455692318,1.67278158566786,2.89638276307112,2.26461224631066,5.66734982344852,8.18316402151673,1.18586333383957,0.963963949265421,3.40656204499845,3.73937767701236,3.58351310577867,4.61916344323099,0,5.09839335925461,8.46505959501303,3.77210159511796,1.47650946440386,3.68922177532713,4.39328098385976,4.72593848320757,3.20847640546249,3.47640433729398,2.10837217149998,1.03135543248187,0.680879211507576,3.96134406868882,4.65691261617916,6.64444808597936,3.01478397191865,6.0645397984704,4.60737257685939,5.78483403317739,5.86679270159276,6.99045833850607,0.661585194164886,0.65954501176592,1.29171541356724,1.14594557363496,5.01363844813173,1.80554989719567,8.45294426226567,1.66882771809459,10.9357363710626,9.08102219038179,5.18544676635193,9.04168593622517,3.41735569302563,14.1842467388044,5.26933132980952,6.57771825921193,6.77179871641677,10.5013767981662,6.16855187483214,1.62655573701479,6.80433647177348,3.97267762427491,5.02233896616208,8.63131816862852,5.62043498932284,9.16145796944104,8.94343315713371,1.24267862617385,2.25477175473676,4.63501292736334,4.63283773279873,2.52786544847262,6.71631082084202,5.74450826668646,3.16864544343536,3.77592716047455,2.51662426621706,1.93267296660805,2.30424005006292,5.05617793005085,11.149886840959,10.5792285879772,6.88580361782314,3.22248052201467,5.76175928865668,10.4570041082373,7.67985541307802,5.14928894735553,4.11516755936999,7.76361625553672,6.1398464866044,5.77271049841977,7.12949103307571,1.81384306892169,6.43759264784788,13.8159339178593,9.56942313275247,3.47741269257943,17.6421526924111,6.22715522508701,7.28852488868824,7.02200945649509,2.25900737046827,5.06357760157895,1.14579102687879,8.76451229952807,4.11049511862385,0.755393897389701,3.37511250115903,2.70192721934532,5.43770890781046,1.55328093525546,11.8317576245961,4.78829848081237,5.80494259564056,3.64660075602441,5.8691685535835,7.72142735490059,7.11189528965169,4.73880631649457,5.45562656306086,6.82282471762253,6.08350319736575,4.90428487603798,5.15028291084353,4.22566005872137,4.42253110958222,4.76293691283074,5.2147946675185,5.59436739344745,8.65380391686944,8.39033844766065,6.51451579532289,5.6792257970988,7.39152188836695,4.36039249896986,4.51725025993587,6.26148098398406,5.48783918618318,8.15516105457313,9.64209208305619,5.61142271657738,4.03359061622192,4.72821515402705,9.82154503607254,7.59190521811233,4.24394544158511,3.74715866906919,4.44470056046276,3.86767897286937,1.91288332068843,4.63241980150983,1.85494268496337|short_description=p@chr5:143665480..143665529,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=462 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:143665480..143665529,- | |||
|id=chr5:143665480..143665529,- | |||
|ontology_enrichment_celltype=CL:0000144!5.89e-20!121;CL:0000012!5.89e-20!121;CL:0002371!6.93e-20!118;CL:0000548!4.32e-18!115;CL:0000004!4.32e-18!115;CL:0000255!4.32e-18!115;CL:0000063!3.01e-13!66;CL:0000219!4.39e-13!54;CL:0000034!7.35e-11!97;CL:0000723!3.34e-10!91;CL:0000048!3.34e-10!91;CL:0002320!9.49e-10!46;CL:0000134!9.49e-10!46;CL:0002031!4.29e-08!25;CL:0000738!8.95e-08!17;CL:0002087!8.95e-08!17;CL:0002321!2.58e-07!70;CL:0000220!2.58e-07!70;CL:0000988!8.45e-07!32;CL:0002032!8.45e-07!32;CL:0000037!8.45e-07!32;CL:0000566!8.45e-07!32;CL:0000837!8.45e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,4.19e-13,54;CL:0000034,6.86e-11,97;CL:0000723,3.12e-10,91;CL:0000048,3.12e-10,91;CL:0002320,9.09e-10,46;CL:0000134,9.09e-10,46;CL:0002031,4.07e-08,25;CL:0000738,8.94e-08,17;CL:0002087,8.94e-08,17;CL:0002321,2.50e-07,70;CL:0000988,8.11e-07,32;CL:0002032,8.11e-07,32;CL:0000037,8.11e-07,32;CL:0000837,8.11e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!9.49e-10!46;UBERON:0002193!1.57e-08!48;UBERON:0002390!2.12e-08!45;UBERON:0003061!2.12e-08!45;UBERON:0002204!9.06e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.09e-10,46;UBERON:0002193,1.54e-08,48;UBERON:0002405,1.54e-08,48;UBERON:0002390,2.12e-08,45;UBERON:0003061,2.12e-08,45;UBERON:0002204,9.06e-07,32 | |||
|phase1_expression=4.96461426024861,8.02643437570531,9.55498402718026,14.215817931421,18.5331420080148,5.37213670118047,11.4470193891808,18.2063886052623,10.98152032783,9.12851652655775,11.8140398075598,8.61539317149633,15.0656642339461,18.5331253128274,9.32707333083856,7.69406016081339,9.79386629379405,17.192688012024,17.4135330679288,7.63901373236454,3.40173160604279,12.3120779489098,11.4927907221132,23.998863419011,28.9055694144634,13.7815671387605,14.6459078694085,14.0056301245828,37.2445902134493,16.6339885641554,10.6430645114546,6.98533740805594,7.38077745101484,0,3.75507105676657,3.32469290716985,2.85837098767317,46.8755426425337,31.253413780952,31.4114246384279,55.2937598749153,57.3758207365094,36.8987868303677,13.8486499773135,15.2065396829272,32.6713218847793,17.9950009200049,34.665999864491,10.3252505885202,20.8039992009483,12.5987779462826,28.7505128729943,26.0063039389491,15.9579671242496,17.1407837562657,37.5598776612483,24.6418758347331,28.8776371675368,6.06949382578793,8.46385566835253,5.70448263155561,11.8595586224196,25.789549087223,90.4399215867806,60.3208481165854,87.3890541383703,68.3088251981963,56.4800908822685,7.67303131082735,15.1206650931494,8.62332341540666,13.9968982357864,14.7981922437581,5.51208596467293,8.91362880469598,19.3035945188104,0,4.97980618532232,5.52983519722476,5.01167893374737,8.78281378583133,5.2091337055676,9.77140496504833,3.37657566019008,2.29197371665215,11.7851434189467,11.8168495063255,4.28718725398191,15.3724172466364,12.1670211771925,15.9425468785923,1.72084775396277,17.6792546764015,10.7940638327563,3.24888208723835,2.24013443548668,2.38755514223978,13.2935651610885,30.3949625385356,28.9738451098479,5.35204995151386,19.2489716121477,10.1922095882658,21.3320010945999,43.514699243254,42.5644573998166,39.9364311561679,8.22123933977232,0.258937883647172,4.15637989381509,8.50078101154066,4.87144765299426,6.91846491768175,3.16517545160507,2.58695155698551,1.75933227861546,8.65182387070309,1.01219549843938,2.65383165584962,2.75003644910596,3.09178125844551,4.84875253135222,1.86391761218122,1.17112318804619,3.56059401582874,13.0283098156382,10.7833612055328,1.19980546198682,9.78440748462598,1.04853447583376,1.37250180845588,4.14659361972453,1.73824320192276,1.02286182932132,1.45451631191692,1.29793010454206,3.46253837091075,5.22509276562391,3.0326731012041,1.05220927943237,5.46505860443356,3.67843367093557,2.16074555766419,4.37043971723574,1.49680298132921,2.69038812598185,4.12287588062807,1.81092359517311,3.88022387279116,3.21480336285293,3.51902248327898,6.57587197282724,2.22437799380478,3.1342694986995,3.08673204611915,7.36426787228425,2.80885274925294,4.37491442095016,9.37739548005456,3.93538967817454,2.34526059981096,4.32148947506436,0.710234206755631,2.75469924446365,2.77680803197281,0.697601834251224,2.68273401399619,2.33530684734339,1.81015834904829,2.62667942526552,0.729619285912702,3.50879969820798,3.51280184465681,1.07365135008297,1.26173969138476,2.88132914661996,16.1905203662061,7.1401652999157,5.54549451391608,5.80591679651096,1.54640953586512,3.22693639397348,6.22658522765637,9.13083005340284,14.2358718463353,11.3642278759568,10.8074139784116,8.35617182572834,8.38345574612217,8.08937467788799,13.8328351919804,8.16479220342906,7.39704813717019,4.11294645395024,0,6.51684249105006,2.32742984601151,2.87556861550306,2.15004226222475,1.18088118383682,2.04098346193787,2.09775178667061,1.77871576252289,3.83743743147016,5.89676985339609,4.04751802292737,4.86864291332407,6.75296047306767,8.65727896056827,3.45235364940973,6.64754429777645,12.6298250066517,18.6898668485561,5.20997326735905,4.36852742360385,3.53610429125956,4.12614051100398,3.85954817090694,5.17308932466493,4.35830247072115,2.77040459951444,6.45031325945715,7.97946844180907,4.02015017860358,3.80869825417622,5.65887578787617,2.04925687338048,3.98636441367795,2.07291199254733,6.06294264448231,8.46156411142888,5.78596234326046,72.3798162908507,112.588476550473,2.45882136509518,4.13905119457099,0.481651769963376,1.64096361229084,5.57378814280696,1.76729649043061,3.47059041357882,5.0757036758563,4.09304455692318,1.67278158566786,2.89638276307112,2.26461224631066,5.66734982344852,8.18316402151673,1.18586333383957,0.963963949265421,3.40656204499845,3.73937767701236,3.58351310577867,4.61916344323099,0,5.09839335925461,8.46505959501303,3.77210159511796,1.47650946440386,3.68922177532713,4.39328098385976,4.72593848320757,3.20847640546249,3.47640433729398,2.10837217149998,1.03135543248187,0.680879211507576,3.96134406868882,4.65691261617916,6.64444808597936,3.01478397191865,6.0645397984704,4.60737257685939,5.78483403317739,5.86679270159276,6.99045833850607,0.661585194164886,0.65954501176592,1.29171541356724,1.14594557363496,5.01363844813173,1.80554989719567,8.45294426226567,1.66882771809459,10.9357363710626,9.08102219038179,5.18544676635193,9.04168593622517,3.41735569302563,14.1842467388044,5.26933132980952,6.57771825921193,6.77179871641677,10.5013767981662,6.16855187483214,1.62655573701479,6.80433647177348,3.97267762427491,5.02233896616208,8.63131816862852,5.62043498932284,9.16145796944104,8.94343315713371,1.24267862617385,2.25477175473676,4.63501292736334,4.63283773279873,2.52786544847262,6.71631082084202,5.74450826668646,3.16864544343536,3.77592716047455,2.51662426621706,1.93267296660805,2.30424005006292,5.05617793005085,11.149886840959,10.5792285879772,6.88580361782314,3.22248052201467,5.76175928865668,10.4570041082373,7.67985541307802,5.14928894735553,4.11516755936999,7.76361625553672,6.1398464866044,5.77271049841977,7.12949103307571,1.81384306892169,6.43759264784788,13.8159339178593,9.56942313275247,3.47741269257943,17.6421526924111,6.22715522508701,7.28852488868824,7.02200945649509,2.25900737046827,5.06357760157895,1.14579102687879,8.76451229952807,4.11049511862385,0.755393897389701,3.37511250115903,2.70192721934532,5.43770890781046,1.55328093525546,11.8317576245961,4.78829848081237,5.80494259564056,3.64660075602441,5.8691685535835,7.72142735490059,7.11189528965169,4.73880631649457,5.45562656306086,6.82282471762253,6.08350319736575,4.90428487603798,5.15028291084353,4.22566005872137,4.42253110958222,4.76293691283074,5.2147946675185,5.59436739344745,8.65380391686944,8.39033844766065,6.51451579532289,5.6792257970988,7.39152188836695,4.36039249896986,4.51725025993587,6.26148098398406,5.48783918618318,8.15516105457313,9.64209208305619,5.61142271657738,4.03359061622192,4.72821515402705,9.82154503607254,7.59190521811233,4.24394544158511,3.74715866906919,4.44470056046276,3.86767897286937,1.91288332068843,4.63241980150983,1.85494268496337 | |||
|short_description=p@chr5:143665480..143665529,- | |||
}} |
Revision as of 06:56, 14 September 2013
Short description: | p@chr5:143665480..143665529, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:143665480..143665529, - |
Coexpression cluster: | MCL_coexpression_mm9:462 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 4.19e-13 | 54 |
stem cell | 6.86e-11 | 97 |
somatic stem cell | 3.12e-10 | 91 |
multi fate stem cell | 3.12e-10 | 91 |
connective tissue cell | 9.09e-10 | 46 |
mesenchymal cell | 9.09e-10 | 46 |
hematopoietic lineage restricted progenitor cell | 4.07e-08 | 25 |
leukocyte | 8.94e-08 | 17 |
nongranular leukocyte | 8.94e-08 | 17 |
embryonic cell | 2.50e-07 | 70 |
hematopoietic cell | 8.11e-07 | 32 |
hematopoietic oligopotent progenitor cell | 8.11e-07 | 32 |
hematopoietic stem cell | 8.11e-07 | 32 |
hematopoietic multipotent progenitor cell | 8.11e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.09e-10 | 46 |
hemolymphoid system | 1.54e-08 | 48 |
immune system | 1.54e-08 | 48 |
hematopoietic system | 2.12e-08 | 45 |
blood island | 2.12e-08 | 45 |
musculoskeletal system | 9.06e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.