FFCP PHASE1:Hg19::chr9:12701351..12701368,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7306|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12450|TSSclassifier=N|UniProt=|association_with_transcript=-276bp_to_ENST00000470909_5end|coexpression_cluster_id=C4798|description=CAGE_peak_21_at_TYRP1_5end|id=chr9:12701351..12701368,+|ontology_enrichment_celltype=CL:0000148!2.18e-20!10;CL:0000541!2.18e-20!10;CL:0000147!4.03e-19!14;CL:0002195!1.53e-12!2;CL:0002571!1.53e-12!2;CL:0000077!3.96e-10!19;CL:0000710!6.94e-10!20;CL:0002567!1.17e-08!3;CL:0000174!2.12e-08!3;CL:0002590!3.67e-08!3;CL:0000325!4.81e-08!39;CL:0002077!1.39e-07!33;CL:0002566!3.73e-07!1;CL:0000075!3.73e-07!27;CL:0002568!6.99e-07!1;CL:0002174!8.27e-07!1;CL:0000501!8.27e-07!1|ontology_enrichment_celltype_v019=CL:0000148;1.20e-64;10!CL:0000147;3.13e-46;14!CL:0002195;8.98e-37;2!CL:0002571;8.98e-37;2!CL:0000710;2.14e-32;20!CL:0002567;6.21e-25;3!CL:0000075;5.24e-24;27!CL:0002566;1.42e-19;1!CL:0002077;6.99e-18;34!CL:0002097;3.27e-10;2!CL:0000077;4.00e-09;19!CL:0000150;5.20e-09;9!CL:0000174;3.15e-07;3|ontology_enrichment_celltype_v019_2=CL:0000148,1.49e-64,10;CL:0000541,1.49e-64,10;CL:0000147,3.66e-46,14;CL:0002195,9.84e-37,2;CL:0002571,9.84e-37,2;CL:0000710,2.39e-32,20;CL:0002567,6.22e-25,3;CL:0000075,5.68e-24,27;CL:0002566,1.88e-19,1;CL:0002077,4.92e-19,34;CL:0000333,4.89e-15,41;CL:0000133,1.46e-10,59;CL:0002097,3.27e-10,2;CL:0000077,3.73e-09,19;CL:0000150,5.20e-09,9;CL:0000221,1.12e-08,72;CL:0000174,3.16e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1909!4.19e-12!2;DOID:3371!5.57e-07!1;DOID:4549!5.57e-07!1;DOID:5861!5.57e-07!1;DOID:6496!5.57e-07!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002369;3.15e-07;3!UBERON:0001235;3.15e-07;3!UBERON:0006858;3.15e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002369,3.16e-07,3;UBERON:0001235,3.16e-07,3;UBERON:0006858,3.16e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31785681186749,3.81988425558278,3.51652341630141,0,4.52440967894623,2.70308752059526,10.5755780073314,0,0,0,0.517086863031111,0,0,0,0,0,0,0,4.57529579706072,0,0,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970817393606503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,1.28664954824955,0.521988583930423,1.36023555307363,0,0.244736704506468,0,0,4.60496504115285,0,0,0,0,0,0.911579868532147,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.500335809236594,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p21@TYRP1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7306 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-276bp_to_ENST00000470909_5end | |||
|coexpression_cluster_id=C4798 | |||
|description=CAGE_peak_21_at_TYRP1_5end | |||
|id=chr9:12701351..12701368,+ | |||
|ontology_enrichment_celltype=CL:0000148!2.18e-20!10;CL:0000541!2.18e-20!10;CL:0000147!4.03e-19!14;CL:0002195!1.53e-12!2;CL:0002571!1.53e-12!2;CL:0000077!3.96e-10!19;CL:0000710!6.94e-10!20;CL:0002567!1.17e-08!3;CL:0000174!2.12e-08!3;CL:0002590!3.67e-08!3;CL:0000325!4.81e-08!39;CL:0002077!1.39e-07!33;CL:0002566!3.73e-07!1;CL:0000075!3.73e-07!27;CL:0002568!6.99e-07!1;CL:0002174!8.27e-07!1;CL:0000501!8.27e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.20e-64;10!CL:0000147;3.13e-46;14!CL:0002195;8.98e-37;2!CL:0002571;8.98e-37;2!CL:0000710;2.14e-32;20!CL:0002567;6.21e-25;3!CL:0000075;5.24e-24;27!CL:0002566;1.42e-19;1!CL:0002077;6.99e-18;34!CL:0002097;3.27e-10;2!CL:0000077;4.00e-09;19!CL:0000150;5.20e-09;9!CL:0000174;3.15e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.49e-64,10;CL:0000541,1.49e-64,10;CL:0000147,3.66e-46,14;CL:0002195,9.84e-37,2;CL:0002571,9.84e-37,2;CL:0000710,2.39e-32,20;CL:0002567,6.22e-25,3;CL:0000075,5.68e-24,27;CL:0002566,1.88e-19,1;CL:0002077,4.92e-19,34;CL:0000333,4.89e-15,41;CL:0000133,1.46e-10,59;CL:0002097,3.27e-10,2;CL:0000077,3.73e-09,19;CL:0000150,5.20e-09,9;CL:0000221,1.12e-08,72;CL:0000174,3.16e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!4.19e-12!2;DOID:3371!5.57e-07!1;DOID:4549!5.57e-07!1;DOID:5861!5.57e-07!1;DOID:6496!5.57e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;3.15e-07;3!UBERON:0001235;3.15e-07;3!UBERON:0006858;3.15e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,3.16e-07,3;UBERON:0001235,3.16e-07,3;UBERON:0006858,3.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31785681186749,3.81988425558278,3.51652341630141,0,4.52440967894623,2.70308752059526,10.5755780073314,0,0,0,0.517086863031111,0,0,0,0,0,0,0,4.57529579706072,0,0,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970817393606503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,1.28664954824955,0.521988583930423,1.36023555307363,0,0.244736704506468,0,0,4.60496504115285,0,0,0,0,0,0.911579868532147,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.500335809236594,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p21@TYRP1 | |||
}} |
Revision as of 07:23, 14 September 2013
Short description: | p21@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_TYRP1_5end |
Coexpression cluster: | C4798_Melanocyte_mesothelioma_Mesenchymal_extraskeletal_melanoma_Smooth_retina |
Association with transcript: | -276bp_to_ENST00000470909_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.49e-64 | 10 |
melanoblast | 1.49e-64 | 10 |
pigment cell | 3.66e-46 | 14 |
hepatic stem cell | 9.84e-37 | 2 |
hepatic mesenchymal stem cell | 9.84e-37 | 2 |
neurecto-epithelial cell | 2.39e-32 | 20 |
light melanocyte | 6.22e-25 | 3 |
columnar/cuboidal epithelial cell | 5.68e-24 | 27 |
dark melanocyte | 1.88e-19 | 1 |
ecto-epithelial cell | 4.92e-19 | 34 |
migratory neural crest cell | 4.89e-15 | 41 |
neurectodermal cell | 1.46e-10 | 59 |
cortical cell of adrenal gland | 3.27e-10 | 2 |
mesothelial cell | 3.73e-09 | 19 |
glandular epithelial cell | 5.20e-09 | 9 |
ectodermal cell | 1.12e-08 | 72 |
steroid hormone secreting cell | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 3.16e-07 | 3 |
adrenal cortex | 3.16e-07 | 3 |
adrenal/interrenal gland | 3.16e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.