FFCP PHASE1:Mm9::chr7:105851601..105851647,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72981|HGNC=|UniProt=Q9CUX1,D6RI43|association_with_transcript=0bp_to_ENSMUST00000033009,ENSMUST00000126356_5end|description=CAGE_peak_2_at_Prkrir_5end|id=chr7:105851601..105851647,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003929!8.41e-17!55;UBERON:0005057!8.31e-14!51;UBERON:0005911!2.10e-12!69;UBERON:0000490!3.23e-10!66;UBERON:0004921!8.70e-09!126;UBERON:0004185!8.70e-09!126;UBERON:0003408!1.83e-08!24;UBERON:0004119!3.47e-08!130;UBERON:0000925!3.47e-08!130;UBERON:0006595!3.47e-08!130;UBERON:0001007!3.57e-08!128;UBERON:0001555!3.57e-08!128;UBERON:0007026!3.57e-08!128;UBERON:0002370!3.89e-08!23;UBERON:0000974!3.89e-08!23;UBERON:0004807!3.89e-08!23;UBERON:0005058!3.89e-08!23;UBERON:0003351!3.89e-08!23;UBERON:0009113!3.89e-08!23;UBERON:0003295!3.89e-08!23;UBERON:0009722!3.89e-08!23;UBERON:0005562!3.89e-08!23;UBERON:0007690!3.89e-08!23;UBERON:0006562!4.66e-08!24;UBERON:0001557!4.66e-08!24;UBERON:0001042!4.66e-08!24;UBERON:0008814!4.66e-08!24;UBERON:0009145!4.66e-08!24;UBERON:0000072!7.24e-08!27;UBERON:0002405!7.82e-08!70;UBERON:0004177!1.11e-07!29;UBERON:0009854!2.51e-07!23;UBERON:0009856!2.51e-07!23;UBERON:0001041!2.65e-07!92;UBERON:0002365!3.62e-07!25;UBERON:0002330!3.62e-07!25;UBERON:0002107!5.22e-07!22;UBERON:0007499!5.22e-07!22;UBERON:0006925!5.22e-07!22;UBERON:0009497!5.22e-07!22;UBERON:0000015!5.22e-07!22;UBERON:0002423!5.22e-07!22;UBERON:0006235!5.22e-07!22;UBERON:0008835!5.22e-07!22;UBERON:0003894!5.22e-07!22;UBERON:0004161!5.22e-07!22;UBERON:0008836!5.22e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0003929,8.41e-17,55;UBERON:0005911,2.10e-12,69;UBERON:0000490,3.23e-10,66;UBERON:0004921,9.30e-10,114;UBERON:0001007,4.52e-09,116;UBERON:0001555,4.52e-09,116;UBERON:0007026,4.52e-09,116;UBERON:0004119,4.56e-09,118;UBERON:0000925,4.56e-09,118;UBERON:0006595,4.56e-09,118;UBERON:0001041,1.75e-08,80;UBERON:0003408,1.83e-08,24;UBERON:0002370,3.89e-08,23;UBERON:0000974,3.89e-08,23;UBERON:0004807,3.89e-08,23;UBERON:0005058,3.89e-08,23;UBERON:0003351,3.89e-08,23;UBERON:0009113,3.89e-08,23;UBERON:0003295,3.89e-08,23;UBERON:0009722,3.89e-08,23;UBERON:0005562,3.89e-08,23;UBERON:0007690,3.89e-08,23;UBERON:0006562,4.66e-08,24;UBERON:0001557,4.66e-08,24;UBERON:0001042,4.66e-08,24;UBERON:0008814,4.66e-08,24;UBERON:0009145,4.66e-08,24;UBERON:0000072,7.24e-08,27;UBERON:0004177,1.11e-07,29;UBERON:0005057,1.11e-07,29;UBERON:0009854,2.51e-07,23;UBERON:0009856,2.51e-07,23;UBERON:0002365,3.62e-07,25;UBERON:0002330,3.62e-07,25;UBERON:0002107,5.22e-07,22;UBERON:0007499,5.22e-07,22;UBERON:0006925,5.22e-07,22;UBERON:0009497,5.22e-07,22;UBERON:0000015,5.22e-07,22;UBERON:0002423,5.22e-07,22;UBERON:0006235,5.22e-07,22;UBERON:0008835,5.22e-07,22;UBERON:0003894,5.22e-07,22;UBERON:0004161,5.22e-07,22;UBERON:0008836,5.22e-07,22|phase1_expression=2.7225304007815,10.1202868215415,9.55498402718026,12.7034968748869,19.0340377379612,10.7442734023609,9.1108929832255,10.0716192284429,26.8906459309683,27.6196141059952,25.6826952338257,35.099749957948,10.4432445258036,11.5394931193077,9.32707333083856,9.31386229993199,4.89693314689703,9.77932712610537,7.67840828192137,7.63901373236454,7.90902598404949,6.25532992565577,7.05239430675126,5.11975752938901,5.73523202667925,5.7423196411502,6.8921919385452,7.97243560937789,3.99049180858385,8.82105454159758,5.98672378769323,5.71527606113668,2.46025915033828,0,14.4425809875637,14.9611180822643,13.6793468695787,3.76678467663217,5.4693474116666,5.75876118371178,6.47054636834116,8.87959130445979,4.85510353031154,4.15459499319405,5.98123894195136,3.85448179539531,1.56478268869608,4.36050312760893,2.85592037554813,3.11087838518853,3.21968769738334,2.87505128729943,9.06026072711776,11.6057942721815,9.07453257684653,9.00408026125814,6.01720223871389,6.18806510732931,6.47412674750713,5.81890077199236,8.87363964908651,4.74382344896785,5.33576877666684,3.5995988691256,2.96659908770092,3.5524005747305,3.29560121570245,3.45796474789399,15.3460626216547,9.45041568321835,12.4091727197315,6.28432165688368,5.52171352379034,13.4739879136449,12.7474476454254,18.3843757322004,2.20231761998777,10.214987046815,12.595735727012,7.25374582516066,7.68496206260241,6.77187381723788,8.93385596804419,6.19038871034848,6.87592114995646,7.66034322231536,7.54569908235246,5.59198337475902,13.8578933799727,9.59758813356176,5.79728977403356,11.185510400758,12.2394840067395,17.2705021324101,12.3457519315057,12.9927797258227,10.8142203501449,8.01022516116871,4.1565760736459,7.77347063922748,4.08445917352373,11.5493829672886,10.1922095882658,0,8.44315059943735,9.62767488805375,7.58286667522175,10.9616524530298,12.1700805314171,6.38301197978747,7.63335437770998,5.78484408793068,4.15107895060905,5.72746034099966,3.76283862834255,7.41432888845085,4.44950941921873,11.2787498397531,5.30766331169925,6.14714029800155,9.05450225687614,9.21262980956922,11.1835056730873,9.9545470983926,8.16842156572475,8.940996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| ||
|EntrezGene=72981 | |||
|HGNC= | |||
|UniProt=Q9CUX1,D6RI43 | |||
|association_with_transcript=0bp_to_ENSMUST00000033009,ENSMUST00000126356_5end | |||
|description=CAGE_peak_2_at_Prkrir_5end | |||
|id=chr7:105851601..105851647,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003929!8.41e-17!55;UBERON:0005057!8.31e-14!51;UBERON:0005911!2.10e-12!69;UBERON:0000490!3.23e-10!66;UBERON:0004921!8.70e-09!126;UBERON:0004185!8.70e-09!126;UBERON:0003408!1.83e-08!24;UBERON:0004119!3.47e-08!130;UBERON:0000925!3.47e-08!130;UBERON:0006595!3.47e-08!130;UBERON:0001007!3.57e-08!128;UBERON:0001555!3.57e-08!128;UBERON:0007026!3.57e-08!128;UBERON:0002370!3.89e-08!23;UBERON:0000974!3.89e-08!23;UBERON:0004807!3.89e-08!23;UBERON:0005058!3.89e-08!23;UBERON:0003351!3.89e-08!23;UBERON:0009113!3.89e-08!23;UBERON:0003295!3.89e-08!23;UBERON:0009722!3.89e-08!23;UBERON:0005562!3.89e-08!23;UBERON:0007690!3.89e-08!23;UBERON:0006562!4.66e-08!24;UBERON:0001557!4.66e-08!24;UBERON:0001042!4.66e-08!24;UBERON:0008814!4.66e-08!24;UBERON:0009145!4.66e-08!24;UBERON:0000072!7.24e-08!27;UBERON:0002405!7.82e-08!70;UBERON:0004177!1.11e-07!29;UBERON:0009854!2.51e-07!23;UBERON:0009856!2.51e-07!23;UBERON:0001041!2.65e-07!92;UBERON:0002365!3.62e-07!25;UBERON:0002330!3.62e-07!25;UBERON:0002107!5.22e-07!22;UBERON:0007499!5.22e-07!22;UBERON:0006925!5.22e-07!22;UBERON:0009497!5.22e-07!22;UBERON:0000015!5.22e-07!22;UBERON:0002423!5.22e-07!22;UBERON:0006235!5.22e-07!22;UBERON:0008835!5.22e-07!22;UBERON:0003894!5.22e-07!22;UBERON:0004161!5.22e-07!22;UBERON:0008836!5.22e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003929,8.41e-17,55;UBERON:0005911,2.10e-12,69;UBERON:0000490,3.23e-10,66;UBERON:0004921,9.30e-10,114;UBERON:0001007,4.52e-09,116;UBERON:0001555,4.52e-09,116;UBERON:0007026,4.52e-09,116;UBERON:0004119,4.56e-09,118;UBERON:0000925,4.56e-09,118;UBERON:0006595,4.56e-09,118;UBERON:0001041,1.75e-08,80;UBERON:0003408,1.83e-08,24;UBERON:0002370,3.89e-08,23;UBERON:0000974,3.89e-08,23;UBERON:0004807,3.89e-08,23;UBERON:0005058,3.89e-08,23;UBERON:0003351,3.89e-08,23;UBERON:0009113,3.89e-08,23;UBERON:0003295,3.89e-08,23;UBERON:0009722,3.89e-08,23;UBERON:0005562,3.89e-08,23;UBERON:0007690,3.89e-08,23;UBERON:0006562,4.66e-08,24;UBERON:0001557,4.66e-08,24;UBERON:0001042,4.66e-08,24;UBERON:0008814,4.66e-08,24;UBERON:0009145,4.66e-08,24;UBERON:0000072,7.24e-08,27;UBERON:0004177,1.11e-07,29;UBERON:0005057,1.11e-07,29;UBERON:0009854,2.51e-07,23;UBERON:0009856,2.51e-07,23;UBERON:0002365,3.62e-07,25;UBERON:0002330,3.62e-07,25;UBERON:0002107,5.22e-07,22;UBERON:0007499,5.22e-07,22;UBERON:0006925,5.22e-07,22;UBERON:0009497,5.22e-07,22;UBERON:0000015,5.22e-07,22;UBERON:0002423,5.22e-07,22;UBERON:0006235,5.22e-07,22;UBERON:0008835,5.22e-07,22;UBERON:0003894,5.22e-07,22;UBERON:0004161,5.22e-07,22;UBERON:0008836,5.22e-07,22 | |||
|phase1_expression=2.7225304007815,10.1202868215415,9.55498402718026,12.7034968748869,19.0340377379612,10.7442734023609,9.1108929832255,10.0716192284429,26.8906459309683,27.6196141059952,25.6826952338257,35.099749957948,10.4432445258036,11.5394931193077,9.32707333083856,9.31386229993199,4.89693314689703,9.77932712610537,7.67840828192137,7.63901373236454,7.90902598404949,6.25532992565577,7.05239430675126,5.11975752938901,5.73523202667925,5.7423196411502,6.8921919385452,7.97243560937789,3.99049180858385,8.82105454159758,5.98672378769323,5.71527606113668,2.46025915033828,0,14.4425809875637,14.9611180822643,13.6793468695787,3.76678467663217,5.4693474116666,5.75876118371178,6.47054636834116,8.87959130445979,4.85510353031154,4.15459499319405,5.98123894195136,3.85448179539531,1.56478268869608,4.36050312760893,2.85592037554813,3.11087838518853,3.21968769738334,2.87505128729943,9.06026072711776,11.6057942721815,9.07453257684653,9.00408026125814,6.01720223871389,6.18806510732931,6.47412674750713,5.81890077199236,8.87363964908651,4.74382344896785,5.33576877666684,3.5995988691256,2.96659908770092,3.5524005747305,3.29560121570245,3.45796474789399,15.3460626216547,9.45041568321835,12.4091727197315,6.28432165688368,5.52171352379034,13.4739879136449,12.7474476454254,18.3843757322004,2.20231761998777,10.214987046815,12.595735727012,7.25374582516066,7.68496206260241,6.77187381723788,8.93385596804419,6.19038871034848,6.87592114995646,7.66034322231536,7.54569908235246,5.59198337475902,13.8578933799727,9.59758813356176,5.79728977403356,11.185510400758,12.2394840067395,17.2705021324101,12.3457519315057,12.9927797258227,10.8142203501449,8.01022516116871,4.1565760736459,7.77347063922748,4.08445917352373,11.5493829672886,10.1922095882658,0,8.44315059943735,9.62767488805375,7.58286667522175,10.9616524530298,12.1700805314171,6.38301197978747,7.63335437770998,5.78484408793068,4.15107895060905,5.72746034099966,3.76283862834255,7.41432888845085,4.44950941921873,11.2787498397531,5.30766331169925,6.14714029800155,9.05450225687614,9.21262980956922,11.1835056730873,9.9545470983926,8.16842156572475,8.9409969323007,8.8663192134381,5.39912457894067,7.62421362438388,5.54225365797844,5.49000723382352,8.67015029578764,8.34356736922927,6.39288643325826,8.3115217823824,6.32740925964255,5.39748628406676,5.47390670684409,2.27450482590307,8.62811609134543,9.62891277924007,5.51765050640335,13.1445354757905,11.4535661555143,8.64063539221864,5.12454881139399,6.27801554550183,1.81092359517311,18.3232793992916,10.9681526497335,5.98233822157426,8.32943783224784,9.73165372289593,10.0993128291428,9.26019613835746,5.37392520409932,9.83098462238529,5.40430604940902,7.10408748488982,8.07790512888457,8.67746421930056,6.48223421259654,6.15536312521547,6.49321964766433,6.94202007993202,6.51095045301142,8.58474884478781,5.83826711835847,5.75959474697182,6.07419617092652,5.43161023957233,7.45619935869195,5.26920276698522,6.1734952629771,7.99101804543684,6.48299057989492,7.59963200862735,5.55346189993443,9.81125952462076,9.52170354627798,12.371276286921,7.05892336181699,8.67274370994994,9.70150693174052,5.69434873853414,7.74085087202851,6.78605063760728,6.96347652144028,6.04388670069272,8.08937467788799,10.1584883441106,6.37252074413975,11.3800740571849,8.68288695833939,5.63538678365402,9.57161240872977,7.75809948670503,6.66290288958026,5.12215950706484,7.23289725100051,7.22194148070324,4.93588655687202,19.5658733877518,18.6866518402025,18.4765455406411,15.5154857545549,17.2431103180227,13.7470981058878,11.7127891819453,9.78166867332756,5.35046248357617,7.4131581560782,24.4405951096503,7.44281895337007,8.7370548472077,16.4176270665623,14.7105879087968,9.64887042726734,6.65111484599777,11.1799932944586,10.2667935158476,9.33597971763535,8.44884893838608,8.37531287209079,6.66522194480839,3.51240566144038,5.2019597555043,3.76489972402917,7.17546458958692,5.57135270033509,6.73471429276993,4.77341893318988,7.53956419696361,5.4390568381871,11.8023425524569,6.07060841870411,9.15138362930414,6.21221938938677,9.01642199571715,4.79694761688309,6.62567260774139,3.51394869866975,4.09304455692318,5.9742199488138,4.67877215573028,11.889214293131,7.2865926301481,4.9683495844923,2.37172666767914,8.9969968598106,5.39372323791421,4.09550888434687,5.04949573996086,5.1140738121486,11.9470624505967,5.09839335925461,9.67435382287203,7.92141334974772,6.20133975049623,7.07100840271033,6.71913562237375,4.72593848320757,6.06045543254026,9.16506598013866,6.32511651449993,8.25084345985495,4.42571487479924,7.92268813737765,4.39819524861365,5.35842587578981,3.72414490648775,5.17269571046005,5.26556865926787,3.95804433848979,9.62154003061212,6.35496212591461,4.41056796109924,11.5420377059036,6.13564821444441,10.1325713879302,7.40108532819446,10.1767357841938,7.28702091574627,10.5692422145991,11.4483490134561,11.144890870014,7.22258656741876,7.53473828018764,7.51818252465638,7.32090154260872,6.62915876976036,8.81694149639045,5.94259887359022,3.81868247206045,7.75023184273782,10.775931757723,11.880587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| |||
|short_description=p2@Prkrir | |||
}} |
Revision as of 11:11, 14 September 2013
Short description: | p2@Prkrir |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Prkrir_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000033009, ENSMUST00000126356_5end |
EntrezGene: | Prkrir |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.