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FFCP PHASE1:Mm9::chr7:148661165..148661191,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=64540|HGNC=|MCL_coexpression_id=2462|UniProt=Q9DCK3,Q4FJW7|association_with_transcript=26bp_to_ENSMUST00000026585,uc009kln.1_5end|description=CAGE_peak_1_at_Tspan4_5end|id=chr7:148661165..148661191,+|ontology_enrichment_celltype=CL:0000333!3.24e-07!10;CL:0000095!3.24e-07!10;CL:0000243!3.24e-07!10;CL:0000123!3.24e-07!10;CL:0000125!3.24e-07!10;CL:0000030!3.24e-07!10;CL:0000339!3.24e-07!10|ontology_enrichment_celltype_v019_2=CL:0000333,3.16e-07,10;CL:0000095,3.16e-07,10;CL:0000243,3.16e-07,10;CL:0000123,3.16e-07,10;CL:0000125,3.16e-07,10;CL:0000030,3.16e-07,10;CL:0000339,3.16e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!1.17e-11!66;UBERON:0000466!1.50e-10!79;UBERON:0005172!7.13e-10!49;UBERON:0005173!7.13e-10!49;UBERON:0002417!7.13e-10!49;UBERON:0000916!7.13e-10!49;UBERON:0002100!7.79e-10!98;UBERON:0000926!1.43e-09!193;UBERON:0004120!1.43e-09!193;UBERON:0006603!1.43e-09!193;UBERON:0005177!1.64e-09!85;UBERON:0003914!4.06e-09!47;UBERON:0005256!6.22e-09!47;UBERON:0002107!2.24e-08!22;UBERON:0007499!2.24e-08!22;UBERON:0006925!2.24e-08!22;UBERON:0009497!2.24e-08!22;UBERON:0000015!2.24e-08!22;UBERON:0002423!2.24e-08!22;UBERON:0006235!2.24e-08!22;UBERON:0008835!2.24e-08!22;UBERON:0003894!2.24e-08!22;UBERON:0004161!2.24e-08!22;UBERON:0008836!2.24e-08!22;UBERON:0002365!6.26e-08!25;UBERON:0002330!6.26e-08!25;UBERON:0009854!1.42e-07!23;UBERON:0009856!1.42e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002100,6.32e-13,90;UBERON:0005177,5.23e-12,79;UBERON:0009569,1.12e-11,66;UBERON:0005256,6.72e-10,45;UBERON:0005172,6.87e-10,49;UBERON:0005173,6.87e-10,49;UBERON:0002417,6.87e-10,49;UBERON:0000916,6.87e-10,49;UBERON:0003104,7.20e-10,61;UBERON:0009142,7.20e-10,61;UBERON:0003914,3.92e-09,47;UBERON:0002107,2.17e-08,22;UBERON:0007499,2.17e-08,22;UBERON:0006925,2.17e-08,22;UBERON:0009497,2.17e-08,22;UBERON:0000015,2.17e-08,22;UBERON:0002423,2.17e-08,22;UBERON:0006235,2.17e-08,22;UBERON:0008835,2.17e-08,22;UBERON:0003894,2.17e-08,22;UBERON:0004161,2.17e-08,22;UBERON:0008836,2.17e-08,22;UBERON:0002365,6.08e-08,25;UBERON:0002330,6.08e-08,25;UBERON:0009854,1.38e-07,23;UBERON:0009856,1.38e-07,23|phase1_expression=6.08565618998217,4.18770489167233,1.36499771816861,0,0.500895729946347,2.01455126294268,1.63528848416868,0,0,0,0.171217968225505,0.0797721589953364,0,0,6.32908547449759,7.69406016081339,3.49780939064073,0.315462165358238,0.411343300817216,0.42438965179803,16.9236147400629,6.65249373045932,8.097193463307,0.95995453676044,1.14704640533585,1.72269589234506,2.15380998079537,0.861884930743556,0.950117097281869,1.76421090831952,3.32595765982957,107.320183814678,118.092439216237,142.633512913895,0.866554859253824,1.66234645358492,2.85837098767317,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0,209.114614657434,194.13682328537,233.838562253982,455.351762410559,60.8290186301446,110.282463732705,116.074649747347,130.887304219714,76.1888591134349,0.167782606057736,0,0.672187598284928,293.018497644944,283.38157209943,290.3233879522,0.404632921719196,0.528990979272033,0.633831403506179,381.200098577774,365.500161201678,84.5905734244515,88.0091062684607,90.9414547131008,171.071663106009,119.491892955003,1.65903379693564,2.02508907497536,2.73422449756797,2.85650984403804,5.30084498283872,1.22490799214954,0.287536413054709,1.83843757322004,3.30347642998166,1.14918604276669,1.38245879930619,0.395658863190582,0.914876436024097,0.52091337055676,2.23346399201105,3.37657566019008,4.5839474333043,2.35702868378934,2.56269025438385,2.60959224155421,280.716998686113,129.605225583137,82.3215147912765,98.088321975878,211.47108478311,27.5248627735287,39.6363614643078,107.078426016263,21.487996280158,151.682987094471,194.319931442946,204.230274066977,2.67602497575693,174.524009283472,114.662357867991,113.770672504533,19.4841936910093,19.5087096415826,14.1546844604139,27.7466827717316,10.616453229534,43.0482203287992,30.1864468573076,23.748307308347,23.753396217374,20.1968338340514,25.8695155698551,25.1333182659351,32.6297357409373,42.0784128636943,7.07688441559899,26.2062296914803,13.471332626084,18.9101348722737,1.86391761218122,1.17112318804619,1.25668024088073,2.55457055208591,8.02761334189666,5.39912457894067,5.84523044536098,0.449371918214468,0.915001205637253,0.879580464790051,1.21677024134594,0.255715457330331,0.41557608911912,0.973447578406546,49.901288286655,17.2925689148029,6.06534620240819,3.57751155007006,4.81445638962004,9.65588838620586,9.54329287968351,8.28876498096433,6.05524842446818,5.38077625196369,6.93392761741993,7.24369438069244,4.095791865724,7.94245536704841,15.8356011747554,30.6874025398605,14.1804097105055,14.626590993931,13.7874031393322,31.4474141573219,6.31991868581911,10.5512641917033,6.81992398549422,13.4631752148076,14.3060896588469,14.0448407939592,10.6535131013345,8.06733350164356,12.8041703696524,12.556833016522,13.9502168727802,16.4639132737709,11.5191894939436,8.70087559619205,8.51222500231485,8.62579925809461,10.099305303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|EntrezGene=64540
|HGNC=
|MCL_coexpression_id=2462
|UniProt=Q9DCK3,Q4FJW7
|association_with_transcript=26bp_to_ENSMUST00000026585,uc009kln.1_5end
|description=CAGE_peak_1_at_Tspan4_5end
|id=chr7:148661165..148661191,+
|ontology_enrichment_celltype=CL:0000333!3.24e-07!10;CL:0000095!3.24e-07!10;CL:0000243!3.24e-07!10;CL:0000123!3.24e-07!10;CL:0000125!3.24e-07!10;CL:0000030!3.24e-07!10;CL:0000339!3.24e-07!10
|ontology_enrichment_celltype_v019_2=CL:0000333,3.16e-07,10;CL:0000095,3.16e-07,10;CL:0000243,3.16e-07,10;CL:0000123,3.16e-07,10;CL:0000125,3.16e-07,10;CL:0000030,3.16e-07,10;CL:0000339,3.16e-07,10
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009569!1.17e-11!66;UBERON:0000466!1.50e-10!79;UBERON:0005172!7.13e-10!49;UBERON:0005173!7.13e-10!49;UBERON:0002417!7.13e-10!49;UBERON:0000916!7.13e-10!49;UBERON:0002100!7.79e-10!98;UBERON:0000926!1.43e-09!193;UBERON:0004120!1.43e-09!193;UBERON:0006603!1.43e-09!193;UBERON:0005177!1.64e-09!85;UBERON:0003914!4.06e-09!47;UBERON:0005256!6.22e-09!47;UBERON:0002107!2.24e-08!22;UBERON:0007499!2.24e-08!22;UBERON:0006925!2.24e-08!22;UBERON:0009497!2.24e-08!22;UBERON:0000015!2.24e-08!22;UBERON:0002423!2.24e-08!22;UBERON:0006235!2.24e-08!22;UBERON:0008835!2.24e-08!22;UBERON:0003894!2.24e-08!22;UBERON:0004161!2.24e-08!22;UBERON:0008836!2.24e-08!22;UBERON:0002365!6.26e-08!25;UBERON:0002330!6.26e-08!25;UBERON:0009854!1.42e-07!23;UBERON:0009856!1.42e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0002100,6.32e-13,90;UBERON:0005177,5.23e-12,79;UBERON:0009569,1.12e-11,66;UBERON:0005256,6.72e-10,45;UBERON:0005172,6.87e-10,49;UBERON:0005173,6.87e-10,49;UBERON:0002417,6.87e-10,49;UBERON:0000916,6.87e-10,49;UBERON:0003104,7.20e-10,61;UBERON:0009142,7.20e-10,61;UBERON:0003914,3.92e-09,47;UBERON:0002107,2.17e-08,22;UBERON:0007499,2.17e-08,22;UBERON:0006925,2.17e-08,22;UBERON:0009497,2.17e-08,22;UBERON:0000015,2.17e-08,22;UBERON:0002423,2.17e-08,22;UBERON:0006235,2.17e-08,22;UBERON:0008835,2.17e-08,22;UBERON:0003894,2.17e-08,22;UBERON:0004161,2.17e-08,22;UBERON:0008836,2.17e-08,22;UBERON:0002365,6.08e-08,25;UBERON:0002330,6.08e-08,25;UBERON:0009854,1.38e-07,23;UBERON:0009856,1.38e-07,23
|phase1_expression=6.08565618998217,4.18770489167233,1.36499771816861,0,0.500895729946347,2.01455126294268,1.63528848416868,0,0,0,0.171217968225505,0.0797721589953364,0,0,6.32908547449759,7.69406016081339,3.49780939064073,0.315462165358238,0.411343300817216,0.42438965179803,16.9236147400629,6.65249373045932,8.097193463307,0.95995453676044,1.14704640533585,1.72269589234506,2.15380998079537,0.861884930743556,0.950117097281869,1.76421090831952,3.32595765982957,107.320183814678,118.092439216237,142.633512913895,0.866554859253824,1.66234645358492,2.85837098767317,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0,209.114614657434,194.13682328537,233.838562253982,455.351762410559,60.8290186301446,110.282463732705,116.074649747347,130.887304219714,76.1888591134349,0.167782606057736,0,0.672187598284928,293.018497644944,283.38157209943,290.3233879522,0.404632921719196,0.528990979272033,0.633831403506179,381.200098577774,365.500161201678,84.5905734244515,88.0091062684607,90.9414547131008,171.071663106009,119.491892955003,1.65903379693564,2.02508907497536,2.73422449756797,2.85650984403804,5.30084498283872,1.22490799214954,0.287536413054709,1.83843757322004,3.30347642998166,1.14918604276669,1.38245879930619,0.395658863190582,0.914876436024097,0.52091337055676,2.23346399201105,3.37657566019008,4.5839474333043,2.35702868378934,2.56269025438385,2.60959224155421,280.716998686113,129.605225583137,82.3215147912765,98.088321975878,211.47108478311,27.5248627735287,39.6363614643078,107.078426016263,21.487996280158,151.682987094471,194.319931442946,204.230274066977,2.67602497575693,174.524009283472,114.662357867991,113.770672504533,19.4841936910093,19.5087096415826,14.1546844604139,27.7466827717316,10.616453229534,43.0482203287992,30.1864468573076,23.748307308347,23.753396217374,20.1968338340514,25.8695155698551,25.1333182659351,32.6297357409373,42.0784128636943,7.07688441559899,26.2062296914803,13.471332626084,18.9101348722737,1.86391761218122,1.17112318804619,1.25668024088073,2.55457055208591,8.02761334189666,5.39912457894067,5.84523044536098,0.449371918214468,0.915001205637253,0.879580464790051,1.21677024134594,0.255715457330331,0.41557608911912,0.973447578406546,49.901288286655,17.2925689148029,6.06534620240819,3.57751155007006,4.81445638962004,9.65588838620586,9.54329287968351,8.28876498096433,6.05524842446818,5.38077625196369,6.93392761741993,7.24369438069244,4.095791865724,7.94245536704841,15.8356011747554,30.6874025398605,14.1804097105055,14.626590993931,13.7874031393322,31.4474141573219,6.31991868581911,10.5512641917033,6.81992398549422,13.4631752148076,14.3060896588469,14.0448407939592,10.6535131013345,8.06733350164356,12.8041703696524,12.556833016522,13.9502168727802,16.4639132737709,11.5191894939436,8.70087559619205,8.51222500231485,8.62579925809461,10.0993053033883,7.91817870686193,1.47202963994889,1.3377599609307,0.330418782983798,6.61126416658861,21.3288250535234,21.5980104830208,15.8506977426175,12.5043785266472,10.8965241483986,15.7887269673424,6.64340686162316,17.4580892007452,14.3261069016154,7.16243299348143,8.77338392036041,7.19055526923377,2.16138049874694,3.98282546508734,20.863469104839,17.8227679671177,18.0332377076929,20.7724354402221,19.0073437424273,21.6018325262181,14.4179304643307,20.8130308651239,8.32093257559286,14.1906738510071,154.155366085317,17.1850458887577,18.2799865455279,17.0895205412489,19.6774317746848,15.9176925436595,34.6291158422731,29.9203982948843,26.1037715107807,35.9675451276387,33.0666875012915,27.5384301274693,33.7000686963725,29.8043075977592,46.4639301021753,53.5512308713338,41.9389741678193,26.9077804714088,19.8817271259272,25.1222726947278,19.4792906079457,18.0906758037161,20.2337094753112,24.0014386865093,11.5073655197519,11.9590932410338,14.3509291791738,55.8773903180667,10.3610989119537,8.67894351489069,33.1740824666399,8.15858525728064,16.2282210096282,20.9711927191597,1.12385412991454,1.40654023910644,52.4591825205361,9.08895337935743,23.9786246756355,27.3307121007647,10.5557464889071,28.6762557543062,29.1866263047936,23.7784285862619,31.1704240289669,25.4262596382841,22.9266911208984,1.28528526568723,43.7175462441467,35.0789239224493,35.9980180171403,35.9634868080127,6.63725691699814,27.6769925216679,22.9765903293211,13.013750503157,28.0536798236734,27.6691633149535,28.1686839553361,13.4507479906677,14.2598951353889,13.9056173491759,7.37930260024991,5.15677716240934,1.02131881726136,9.36317688962813,10.3486947026204,13.5032332069903,12.945837055886,14.8046118609719,16.9485491220185,23.7482660309387,52.0971191901437,24.5725202202031,2.8668691747145,10.3878339353132,8.55761461488299,6.33285711745637,6.2073618881631,5.25250879184196,4.95517422270746,1.29797711407357,12.1318325366475,35.9113150256007,26.2976228864991,9.79515976424393,9.02181902958766,8.00723606222829,9.5187920796559,4.89830083132803,3.04039942369732,7.63736494412091,17.3984796469624,15.6555989687673,15.3367583966958,13.1725626489115,15.7221045897248,16.8580432981026,15.5388496763632,5.75863072364865,3.49960427887841,5.59205381778233,5.07323644815771,23.0255480907727,23.3296471544508,22.3618866595655,29.0609602824895,29.0604535844138,38.4931742758073,19.0098401872167,11.8491059201053,10.8712854371703,6.62469014393091,0.948033361884535,14.5962155008918,7.08705604437308,3.89762468933385,3.22248052201467,2.98022032171897,2.04332264183947,1.62458479892035,2.01932899896295,1.21930890648,0.504130925684203,1.55932609183604,0.577271049841977,0.818138315270983,8.61575457737803,56.3844321570124,45.2157837311758,63.7961542183498,13.5232715822533,70.7562932450956,12.454310450174,16.0776284309299,9.5298699766719,1.12950368523413,0.920650473014354,1.71868654031819,1.54667864109319,3.42541259885321,0,0,0,0.906284817968409,0,1.55681021376265,7.98049746802062,15.8782253351345,13.8570828728928,8.38452650511929,11.5821410323509,13.1125569402953,13.598313777767,13.1576875932644,15.6672271293554,9.63221339582911,14.5242282867279,12.1733959710847,11.5245274328765,11.4870937911227,9.0495801343784,12.1678542242098,10.4170979050401,12.7746629249025,13.3951017322302,14.4005086001874,12.7782580434723,14.0677352068919,11.7730597472186,11.1990162694243,12.5229619679681,10.7927503994936,12.6273461490165,11.0001332215148,16.2731258780744,12.4566769030383,11.5250244379409,9.82154503607254,13.0146946596211,16.9757817663404,20.7342779688495,14.7376913320607,15.6855869455258,37.1099364213556,25.8091960369833,14.839541479707
|short_description=p1@Tspan4
}}

Revision as of 12:19, 14 September 2013

Short description:p1@Tspan4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tspan4_5end
Coexpression cluster:MCL_coexpression_mm9:2462
Association with transcript: 26bp_to_ENSMUST00000026585, uc009kln.1_5end
EntrezGene:Tspan4
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Tspan4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.69
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.92
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.10
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3107.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6118.09
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9142.63
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8209.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9194.14
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3233.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7455.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C260.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8110.28
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3116.07
Mouse Astrocytes, donor2.CNhs12078.11552-120C4130.89
Mouse Astrocytes, donor3.CNhs12107.11633-122C476.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1293.02
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1283.38
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5290.32
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6381.20
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1365.50
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C784.59
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E788.01
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D290.94
Mouse Microglia, donor1.CNhs12629.11718-123C8171.07
Mouse Microglia, donor2.CNhs12634.11736-123E8119.49
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D9280.72
Mouse Schwann, donor2.CNhs12573.11746-123F9129.61
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G382.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F798.09
Mouse hepatocyte, donor1.CNhs13078.11714-123C4211.47
Mouse hepatocyte, donor3.CNhs12615.11637-122C827.52
Mouse hepatocyte, donor6.CNhs13090.11822-124F439.64
Mouse hepatocyte, donor8.CNhs13091.11824-124F6107.08
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A721.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7151.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3194.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8204.23
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1174.52
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8114.66
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6113.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G119.48
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G219.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.15
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B627.75
accessory axillary lymph node, adult.CNhs10475.1063-29H910.62
adrenal gland, adult.CNhs10508.49-24D743.05
adrenal gland, embryo E14.CNhs11038.406-44C530.19
adrenal gland, embryo E16.CNhs11004.1254-43D623.75
adrenal gland, embryo E17.CNhs11043.1263-45I123.75
adrenal gland, embryo E18.CNhs11026.1262-18F520.20
adrenal gland, neonate N00.CNhs11191.1311-23C125.87
adrenal gland, neonate N25.CNhs11223.1377-27I325.13
amnion, adult pregnant day17.5.CNhs10488.583-22A832.63
aorta, adult.CNhs10498.46-23H142.08
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F526.21
bone (os femoris), neonate N16.CNhs11225.1525-43A613.47
bone (os femoris), neonate N20.CNhs11195.1350-25C318.91
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.03
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.85
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B149.90
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A217.29
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C64.81
eyeball, embryo E14.CNhs10521.399-16E29.66
eyeball, embryo E15.CNhs10593.426-16C99.54
eyeball, embryo E17.CNhs11023.1261-18D48.29
eyeball, neonate N00.CNhs11207.633-15C66.06
eyeball, neonate N01.CNhs11140.1532-43E75.38
eyeball, neonate N02.CNhs11205.1551-44G86.93
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H27.94
forelimb, embryo E13.CNhs10589.384-1E215.84
forelimb, embryo E14.CNhs10577.413-26A830.69
forelimb, embryo E15.CNhs11007.437-20E714.18
forelimb, embryo E17.CNhs10598.1517-43C414.63
forelimb, embryo E18.CNhs11008.1520-43B513.79
gonad, embryo E13.CNhs11044.1564-45I631.45
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.55
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.82
heart, embryo E11.CNhs10586.331-24E913.46
heart, embryo E12.CNhs11015.353-12F514.31
heart, embryo E13.CNhs11013.376-3I914.04
heart, embryo E14.CNhs10597.403-26D410.65
heart, embryo E15.CNhs11017.431-16C88.07
heart, embryo E16.CNhs11021.457-17C612.80
heart, embryo E17.CNhs11025.479-18E512.56
heart, embryo E18.CNhs11030.1283-20G313.95
heart, neonate N00.CNhs11213.639-21E316.46
heart, neonate N03.CNhs11221.1349-25I211.52
heart, neonate N10.CNhs11118.749-24G18.70
heart, neonate N16.CNhs11209.782-15G18.51
heart, neonate N20.CNhs11127.821-26I68.63
heart, neonate N25.CNhs11196.1351-25D310.10
heart, neonate N30.CNhs11202.1390-42D27.92
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A36.61
intestine, embryo E12.CNhs11019.1251-16I521.33
intestine, embryo E13.CNhs11010.381-16D521.60
intestine, embryo E15.CNhs10602.976-16D815.85
intestine, embryo E16.CNhs10585.463-22H412.50
intestine, embryo E17.CNhs10582.482-18D310.90
intestine, embryo E18.CNhs10526.1289-20F715.79
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E917.46
intestine, neonate N06.CNhs11102.688-20B814.33
intestine, neonate N07.CNhs11095.720-20F27.16
intestine, neonate N10.CNhs11098.755-23A58.77
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I920.86
kidney, embryo E15.CNhs10997.434-16F817.82
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I220.77
kidney, embryo E18.CNhs11001.1288-20C719.01
kidney, neonate N00.CNhs11214.646-21G721.60
kidney, neonate N10.CNhs11206.758-6D514.42
kidney, neonate N20.CNhs11113.832-19I120.81
kidney, neonate N25.CNhs11122.1353-25F38.32
kidney, neonate N30.CNhs11203.1385-42H114.19
liver, adult pregnant day01.CNhs10466.508-5B2154.16
liver, embryo E12.CNhs10601.355-15F817.19
liver, embryo E13.CNhs10524.378-3H618.28
liver, embryo E14.CNhs10594.409-16E117.09
liver, embryo E15.CNhs10520.433-16D719.68
liver, embryo E16.CNhs10523.462-17F515.92
liver, embryo E17.CNhs10510.481-18A334.63
liver, embryo E18.CNhs10579.499-43G429.92
liver, neonate N00.CNhs11117.641-24F426.10
liver, neonate N03.CNhs11123.1345-25G235.97
liver, neonate N06.CNhs11101.684-20A833.07
liver, neonate N07.CNhs11103.716-20H227.54
liver, neonate N10.CNhs11115.751-24B933.70
liver, neonate N20.CNhs11220.823-25A329.80
liver, neonate N25.CNhs11198.1368-26H146.46
liver, neonate N30.CNhs11106.1382-42D153.55
lung, adult.CNhs10474.28-22B141.94
lung, embryo E12.CNhs10522.354-16G226.91
lung, embryo E14.CNhs10604.404-26F819.88
lung, embryo E15.CNhs11020.432-17C525.12
lung, embryo E16.CNhs10998.458-17B619.48
lung, embryo E17.CNhs10605.480-44A618.09
lung, embryo E18.CNhs10583.1287-20I620.23
lung, neonate N00.CNhs11224.640-42C624.00
lung, neonate N06.CNhs11212.683-20E511.51
lung, neonate N07.CNhs11111.715-19A311.96
lung, neonate N10.CNhs11219.750-23E614.35
lung, neonate N20.CNhs11109.822-18A455.88
lung, neonate N25.CNhs11119.1359-25C710.36
lung, neonate N30.CNhs11133.1394-42H28.68
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A133.17
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.16
mammary gland, adult lactating day02.CNhs10480.595-22B616.23
mammary gland, adult pregnant day19.CNhs10476.588-5H220.97
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C752.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.09
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E123.98
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E227.33
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.56
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D728.68
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D829.19
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D923.78
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D431.17
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D525.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D622.93
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I743.72
ovary, embryo E18.CNhs11040.505-44H735.08
ovary, neonate N00.CNhs11217.1299-22I436.00
oviduct, adult pregnant day01.CNhs10500.988-6G635.96
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F427.68
pancreas, embryo E15.CNhs11042.1556-45F222.98
pancreas, embryo E16.CNhs11003.460-26E513.01
pancreas, embryo E17.CNhs10599.1558-45G328.05
pancreas, embryo E18.CNhs10580.1535-43I727.67
pancreas, neonate N00.CNhs11105.645-26G928.17
pancreas, neonate N01.CNhs11138.1531-43D713.45
pancreas, neonate N02.CNhs11139.1539-43D814.26
pancreas, neonate N16.CNhs11136.787-43B613.91
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E69.36
pituitary gland, embryo E13.CNhs11009.370-44C710.35
pituitary gland, embryo E14.CNhs11037.398-44A513.50
pituitary gland, embryo E15.CNhs10592.427-16B912.95
pituitary gland, embryo E16.CNhs11036.449-43F614.80
pituitary gland, embryo E17.CNhs11039.1265-44F516.95
pituitary gland, neonate N00.CNhs11190.1308-22E923.75
placenta, adult pregnant day10.CNhs10472.539-13I752.10
placenta, adult pregnant day17.CNhs10464.577-18G324.57
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C310.39
skin, neonate N00.CNhs11124.650-25G48.56
skin, neonate N03.CNhs11215.662-22H36.33
skin, neonate N06.CNhs11097.693-20I56.21
skin, neonate N10.CNhs11108.762-6C45.25
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G212.13
spleen, embryo E16.CNhs11035.461-43C135.91
spleen, embryo E18.CNhs11011.1271-21F226.30
spleen, neonate N10.CNhs11116.752-24D19.80
spleen, neonate N20.CNhs11112.824-19H19.02
spleen, neonate N25.CNhs11099.1354-25G38.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E317.40
stomach, embryo E15.CNhs10603.1252-16G815.66
stomach, embryo E16.CNhs11022.459-17D415.34
stomach, embryo E17.CNhs11006.1035-18D513.17
stomach, embryo E18.CNhs10999.1286-20C615.72
stomach, neonate N03.CNhs11193.1340-24B816.86
stomach, neonate N07.CNhs11210.718-18A915.54
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I13.50
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F523.03
testis, embryo E15.CNhs11034.443-27C523.33
testis, embryo E16.CNhs11033.470-26G522.36
testis, embryo E17.CNhs11029.486-18I529.06
testis, embryo E18.CNhs11027.503-18G529.06
testis, neonate N00.CNhs11189.1300-22B738.49
testis, neonate N07.CNhs11222.726-26I419.01
testis, neonate N10.CNhs11204.763-44D911.85
testis, neonate N20.CNhs11110.839-18H310.87
testis, neonate N30.CNhs11130.1391-42E26.62
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I414.60
thymus, embryo E15.CNhs11005.430-45I27.09
thymus, embryo E16.CNhs11002.456-26C53.90
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F82.04
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C42.02
thymus, neonate N07.CNhs11211.713-19D31.22
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A21.56
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B48.62
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H356.38
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F745.22
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G563.80
urinary bladder, adult.CNhs10481.879-12E413.52
uterus, adult pregnant day19.CNhs10497.590-15F570.76
uterus, adult.CNhs10509.92-27E512.45
vagina, adult.CNhs10502.89-27D516.08
vesicular gland, adult.CNhs10491.51-27F89.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H215.88
whole body, embryo E14.5.CNhs10578.420-27D213.86
whole body, embryo E14.CNhs10519.395-14B18.38
whole body, embryo E16.CNhs10514.453-14F211.58
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.16
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.67
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.52
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.42
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.40
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.78
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.07
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.77
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.79
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.27
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.53
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.01
whole body, embryo E17.5.CNhs10513.490-9F916.98
whole body, embryo E17.CNhs10517.475-3I520.73
whole body, embryo E18.CNhs10516.493-3B314.74
whole body, neonate N00.CNhs10525.657-19C215.69
whole body, neonate N01.CNhs10576.659-23C637.11
whole body, neonate N06.CNhs10515.692-21D125.81
whole body, neonate N10.CNhs10518.761-6B414.84





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk6.32e-1390
trunk region element5.23e-1279
subdivision of trunk1.12e-1166
trunk mesenchyme6.72e-1045
abdomen element6.87e-1049
abdominal segment element6.87e-1049
abdominal segment of trunk6.87e-1049
abdomen6.87e-1049
mesenchyme7.20e-1061
entire embryonic mesenchyme7.20e-1061
epithelial tube3.92e-0947
liver2.17e-0822
epithelial sac2.17e-0822
digestive gland2.17e-0822
epithelium of foregut-midgut junction2.17e-0822
anatomical boundary2.17e-0822
hepatobiliary system2.17e-0822
foregut-midgut junction2.17e-0822
hepatic diverticulum2.17e-0822
liver primordium2.17e-0822
septum transversum2.17e-0822
liver bud2.17e-0822
exocrine gland6.08e-0825
exocrine system6.08e-0825
digestive tract diverticulum1.38e-0723
sac1.38e-0723







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