FFCP PHASE1:Mm9::chr7:54087766..54087785,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=384622|HGNC=|MCL_coexpression_id=308|UniProt=E9Q0C7|association_with_transcript=-48bp_to_ENSMUST00000048361_5end|description=CAGE_peak_2_at_Gm5331_5end|id=chr7:54087766..54087785,+|ontology_enrichment_celltype=CL:0000063!6.81e-14!66;CL:0000066!7.62e-10!25;CL:0002076!3.90e-08!15;CL:0000223!1.01e-07!20;CL:0000144!5.76e-07!121;CL:0000012!5.76e-07!121|ontology_enrichment_celltype_v019_2=CL:0000066,1.03e-17,25;CL:0002076,4.39e-17,15;CL:0000223,2.76e-14,20;CL:0000049,7.16e-13,19;CL:0000034,8.85e-10,97;CL:0000763,6.05e-09,16;CL:0002320,1.48e-08,46;CL:0000134,1.48e-08,46;CL:0000219,1.73e-08,54;CL:0002563,7.13e-08,9;CL:0002251,7.13e-08,9;CL:0000988,1.04e-07,32;CL:0002032,1.04e-07,32;CL:0000037,1.04e-07,32;CL:0000837,1.04e-07,32;CL:0000839,4.35e-07,13;CL:0000723,8.91e-07,91;CL:0000048,8.91e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.14e-11,15;UBERON:0000485,6.01e-10,11;UBERON:0001242,1.34e-08,13;UBERON:0001262,1.34e-08,13;UBERON:0004786,1.34e-08,13;UBERON:0002384,1.48e-08,46;UBERON:0002204,1.87e-08,32;UBERON:0003350,7.13e-08,9;UBERON:0004808,7.13e-08,9;UBERON:0001277,7.13e-08,9;UBERON:0002371,3.11e-07,16;UBERON:0001474,5.49e-07,22;UBERON:0004765,5.49e-07,22;UBERON:0001434,5.49e-07,22|phase1_expression=1.28119077683835,1.39590163055744,1.36499771816861,0.30246421130683,0,2.35030980676646,9.1108929832255,0.258246646883153,0,0.468129052643987,0.856089841127525,0.558405112967355,0.171200729931206,0.262261207256992,0,4.656931149966,4.19737126876888,2.05050407482854,1.23402990245165,1.69755860719212,0,0,26.1199789138935,11.6794468639187,8.71755268055246,1.14846392823004,0.430761996159075,3.66301095566011,6.65081968097309,0.756090389279792,4.43461021310609,4.44521471421742,0,0,4.33277429626912,6.64938581433969,3.26670970019791,9.62622750694888,7.813353445238,9.94695113550217,5.29408339227913,2.73218193983378,7.76816564849846,0.755380907853464,0.405507724878058,0.550640256485045,0.782391344348039,0,0,0,0.279972843250725,0,0,0,0,1.02903774414379,0,0.515672092277442,0,0,0,0.338844532069132,0,0.899899717281399,0,0,0.599200221036809,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57469057332826,5.36558076758177,16.232411367294,25.8127163094416,0.679971333707751,0,0.649776417447669,0,0,0.681721290312231,16.6263042945836,31.8005617059306,1.12674735821344,17.9657068380045,10.1922095882658,7.11066703153331,12.123498296628,10.6411143499541,7.58286667522175,0,0.258937883647172,0.148442139064825,0.173485326766136,0,0,0,0.352766121407114,0.376999773989026,0,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0.510914110417183,5.51149572727233,14.3976655438418,7.62421362438388,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0,0.199034266818493,6.31991868581911,17.2423097766859,0.284163499395593,0.207125772535502,0,0,0.473489471170421,0,0,0,0.268273401399619,0,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0,0,0,0.528901133327089,0,0.232236671860439,0.257734922644187,1.00841762311671,0.444756087689741,0.380451252225118,0.949058123089023,0,0,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0.189667900953082,0.228497025219458,0,0.407302655690628,0,0.210407459670956,0,0,0.156998727841375,0.123397163921801,0.889357881261447,0,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0,0.287696137450811,0.324270453550071,0,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0.369506380333209,0.568474235311454,0,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0.518054945597687,0.289298117163023,40.7136466636035,38.0733978673097,0,0.275936746304732,0,0,0.983609672260053,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.162886959353576,0.494910368917606,0,0.485561272309963,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,0,0.36012218806262,0,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0,0.180938774784468,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0,0,4.75939603982795,4.05859211738608,5.94259887359022,0.954670618015114,0.316335993581135,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0.247960367176008,0,0.129614973291793,0.621339313086926,0,0,0.330916980914195,0,0.516639293910924,0.337912250981556,0.234714477291508,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0.302478555410522,0,0.0962118416403295,0.116876902181569,0,4.21773311410723,0,3.18980771091749,0.386379188064381,0,0.36630324853453,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0.103787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| ||
|EntrezGene=384622 | |||
|HGNC= | |||
|MCL_coexpression_id=308 | |||
|UniProt=E9Q0C7 | |||
|association_with_transcript=-48bp_to_ENSMUST00000048361_5end | |||
|description=CAGE_peak_2_at_Gm5331_5end | |||
|id=chr7:54087766..54087785,+ | |||
|ontology_enrichment_celltype=CL:0000063!6.81e-14!66;CL:0000066!7.62e-10!25;CL:0002076!3.90e-08!15;CL:0000223!1.01e-07!20;CL:0000144!5.76e-07!121;CL:0000012!5.76e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.03e-17,25;CL:0002076,4.39e-17,15;CL:0000223,2.76e-14,20;CL:0000049,7.16e-13,19;CL:0000034,8.85e-10,97;CL:0000763,6.05e-09,16;CL:0002320,1.48e-08,46;CL:0000134,1.48e-08,46;CL:0000219,1.73e-08,54;CL:0002563,7.13e-08,9;CL:0002251,7.13e-08,9;CL:0000988,1.04e-07,32;CL:0002032,1.04e-07,32;CL:0000037,1.04e-07,32;CL:0000837,1.04e-07,32;CL:0000839,4.35e-07,13;CL:0000723,8.91e-07,91;CL:0000048,8.91e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.14e-11,15;UBERON:0000485,6.01e-10,11;UBERON:0001242,1.34e-08,13;UBERON:0001262,1.34e-08,13;UBERON:0004786,1.34e-08,13;UBERON:0002384,1.48e-08,46;UBERON:0002204,1.87e-08,32;UBERON:0003350,7.13e-08,9;UBERON:0004808,7.13e-08,9;UBERON:0001277,7.13e-08,9;UBERON:0002371,3.11e-07,16;UBERON:0001474,5.49e-07,22;UBERON:0004765,5.49e-07,22;UBERON:0001434,5.49e-07,22 | |||
|phase1_expression=1.28119077683835,1.39590163055744,1.36499771816861,0.30246421130683,0,2.35030980676646,9.1108929832255,0.258246646883153,0,0.468129052643987,0.856089841127525,0.558405112967355,0.171200729931206,0.262261207256992,0,4.656931149966,4.19737126876888,2.05050407482854,1.23402990245165,1.69755860719212,0,0,26.1199789138935,11.6794468639187,8.71755268055246,1.14846392823004,0.430761996159075,3.66301095566011,6.65081968097309,0.756090389279792,4.43461021310609,4.44521471421742,0,0,4.33277429626912,6.64938581433969,3.26670970019791,9.62622750694888,7.813353445238,9.94695113550217,5.29408339227913,2.73218193983378,7.76816564849846,0.755380907853464,0.405507724878058,0.550640256485045,0.782391344348039,0,0,0,0.279972843250725,0,0,0,0,1.02903774414379,0,0.515672092277442,0,0,0,0.338844532069132,0,0.899899717281399,0,0,0.599200221036809,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57469057332826,5.36558076758177,16.232411367294,25.8127163094416,0.679971333707751,0,0.649776417447669,0,0,0.681721290312231,16.6263042945836,31.8005617059306,1.12674735821344,17.9657068380045,10.1922095882658,7.11066703153331,12.123498296628,10.6411143499541,7.58286667522175,0,0.258937883647172,0.148442139064825,0.173485326766136,0,0,0,0.352766121407114,0.376999773989026,0,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0.510914110417183,5.51149572727233,14.3976655438418,7.62421362438388,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0,0.199034266818493,6.31991868581911,17.2423097766859,0.284163499395593,0.207125772535502,0,0,0.473489471170421,0,0,0,0.268273401399619,0,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0,0,0,0.528901133327089,0,0.232236671860439,0.257734922644187,1.00841762311671,0.444756087689741,0.380451252225118,0.949058123089023,0,0,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0.189667900953082,0.228497025219458,0,0.407302655690628,0,0.210407459670956,0,0,0.156998727841375,0.123397163921801,0.889357881261447,0,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0,0.287696137450811,0.324270453550071,0,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0.369506380333209,0.568474235311454,0,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0.518054945597687,0.289298117163023,40.7136466636035,38.0733978673097,0,0.275936746304732,0,0,0.983609672260053,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.162886959353576,0.494910368917606,0,0.485561272309963,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,0,0.36012218806262,0,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0,0.180938774784468,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0,0,4.75939603982795,4.05859211738608,5.94259887359022,0.954670618015114,0.316335993581135,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0.247960367176008,0,0.129614973291793,0.621339313086926,0,0,0.330916980914195,0,0.516639293910924,0.337912250981556,0.234714477291508,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0.302478555410522,0,0.0962118416403295,0.116876902181569,0,4.21773311410723,0,3.18980771091749,0.386379188064381,0,0.36630324853453,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0.342869252385415,0,0,0,0,0.169229215783353,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p2@Gm5331 | |||
}} |
Revision as of 13:51, 14 September 2013
Short description: | p2@Gm5331 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm5331_5end |
Coexpression cluster: | MCL_coexpression_mm9:308 |
Association with transcript: | -48bp_to_ENSMUST00000048361_5end |
EntrezGene: | Gm5331 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.03e-17 | 25 |
endo-epithelial cell | 4.39e-17 | 15 |
endodermal cell | 2.76e-14 | 20 |
common myeloid progenitor | 7.16e-13 | 19 |
stem cell | 8.85e-10 | 97 |
myeloid cell | 6.05e-09 | 16 |
connective tissue cell | 1.48e-08 | 46 |
mesenchymal cell | 1.48e-08 | 46 |
motile cell | 1.73e-08 | 54 |
intestinal epithelial cell | 7.13e-08 | 9 |
epithelial cell of alimentary canal | 7.13e-08 | 9 |
hematopoietic cell | 1.04e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.04e-07 | 32 |
hematopoietic stem cell | 1.04e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.04e-07 | 32 |
myeloid lineage restricted progenitor cell | 4.35e-07 | 13 |
somatic stem cell | 8.91e-07 | 91 |
multi fate stem cell | 8.91e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.14e-11 | 15 |
simple columnar epithelium | 6.01e-10 | 11 |
intestinal mucosa | 1.34e-08 | 13 |
wall of intestine | 1.34e-08 | 13 |
gastrointestinal system mucosa | 1.34e-08 | 13 |
connective tissue | 1.48e-08 | 46 |
musculoskeletal system | 1.87e-08 | 32 |
epithelium of mucosa | 7.13e-08 | 9 |
gastrointestinal system epithelium | 7.13e-08 | 9 |
intestinal epithelium | 7.13e-08 | 9 |
bone marrow | 3.11e-07 | 16 |
bone element | 5.49e-07 | 22 |
skeletal element | 5.49e-07 | 22 |
skeletal system | 5.49e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.