FFCP PHASE1:Mm9::chr7:54087805..54087833,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=384622|HGNC=|MCL_coexpression_id=308|UniProt=E9Q0C7|association_with_transcript=0bp_to_ENSMUST00000048361_5end|description=CAGE_peak_1_at_Gm5331_5end|id=chr7:54087805..54087833,+|ontology_enrichment_celltype=CL:0000063!3.76e-12!66;CL:0000066!4.10e-07!25|ontology_enrichment_celltype_v019_2=CL:0002320,8.44e-13,46;CL:0000134,8.44e-13,46;CL:0000034,2.02e-11,97;CL:0000219,4.08e-11,54;CL:0000049,5.67e-11,19;CL:0000066,6.54e-11,25;CL:0000223,7.94e-11,20;CL:0002076,1.04e-10,15;CL:0000988,6.55e-10,32;CL:0002032,6.55e-10,32;CL:0000037,6.55e-10,32;CL:0000837,6.55e-10,32;CL:0000723,1.24e-09,91;CL:0000048,1.24e-09,91;CL:0000763,2.59e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,8.62e-07,3;DOID:4045,8.62e-07,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.44e-13,46;UBERON:0000344,1.31e-10,15;UBERON:0002371,5.86e-09,16;UBERON:0002204,9.41e-09,32;UBERON:0001242,4.42e-08,13;UBERON:0001262,4.42e-08,13;UBERON:0004786,4.42e-08,13;UBERON:0001474,3.56e-07,22;UBERON:0004765,3.56e-07,22;UBERON:0001434,3.56e-07,22|phase1_expression=2.40223270657191,1.04692622291808,0.454999239389536,0.30246421130683,0,1.00727563147134,4.67225281191051,0.129123323441576,0.703943610758334,1.40438715793196,1.02730780935303,1.51567102091139,0,0.0874204024189974,0,4.25198061518635,2.09868563438444,2.99689057090326,3.01651753932625,4.2438965179803,0,0,17.2391860831697,7.03966660290989,5.50582274561208,1.14846392823004,0.86152399231815,0.861884930743556,3.80046838912748,1.00812051903972,1.77384408524244,0,0,0,5.48818077527422,6.4831511689812,2.45003227514843,47.7126059040075,39.8481025707138,27.7467584306113,27.0586484494267,19.8083190637949,20.3914348273085,0.755380907853464,1.01376931219515,0.550640256485045,0,0.218025156380447,0,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0,2.1314403448383,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908714319998209,1.5870027622425,129.56942644965,112.715527884562,0,1.07940638327563,0,0,0.421333260395256,0.681721290312231,15.5871602761721,19.0803370235584,0.563373679106722,2.56652954828636,2.54805239706646,0,5.41227602528035,3.04031838570118,2.52762222507392,0.22836775943812,0.517875767294343,0.29688427812965,0,0,0,0,0.117588707135705,0,0,0.289198713839823,0,0.323533699894818,0,0,1.86391761218122,0,0,0.255457055208591,9.10594946244994,14.3976655438418,10.2926883929182,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0.219195732427575,0.834141747676794,0.348252166522167,0.61734640922383,0,3.51106593656617,11.5806558201622,0,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0,0.465067889500816,0,0,0.329119699826961,0.164167464079095,0.486412857275134,0,0.439100230582101,0.805238512562231,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,1.1858105083486,0,0,0,0,0.482354319504834,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,1.01031551178845,1.07638448113147,0.964887042726734,0.554259570499814,0,0,0,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,0.630540576424764,0.664394068946325,0.159454768657487,0.81931657357869,0.690739927463582,0.144649058581512,134.204242705952,126.186118645941,0,0,0,0,0.327869890753351,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0,0.425820255624806,0,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0,0.316036757935816,0,1.03135543248187,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0.120625849856312,0.358117032009409,0.164140899745061,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0.376736914009382,0.27338845544205,0.228778173206523,10.8786195196067,11.1961161858926,11.0559979043539,0,0,0.203319467126849,0.216010681643603,0.627264888043406,0.436725127492355,0.134864346384821,0.247960367176008,0,0,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0.405450430580328,0.616265742988964,0.129920822977795,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0.226730383615211,0.221985953374065,0,0.335769232728157,0.579568782096571,0.375364950902364,0,0.428736758158132,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0|short_description=p1@Gm5331}} | ||
|EntrezGene=384622 | |||
|HGNC= | |||
|MCL_coexpression_id=308 | |||
|UniProt=E9Q0C7 | |||
|association_with_transcript=0bp_to_ENSMUST00000048361_5end | |||
|description=CAGE_peak_1_at_Gm5331_5end | |||
|id=chr7:54087805..54087833,+ | |||
|ontology_enrichment_celltype=CL:0000063!3.76e-12!66;CL:0000066!4.10e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,8.44e-13,46;CL:0000134,8.44e-13,46;CL:0000034,2.02e-11,97;CL:0000219,4.08e-11,54;CL:0000049,5.67e-11,19;CL:0000066,6.54e-11,25;CL:0000223,7.94e-11,20;CL:0002076,1.04e-10,15;CL:0000988,6.55e-10,32;CL:0002032,6.55e-10,32;CL:0000037,6.55e-10,32;CL:0000837,6.55e-10,32;CL:0000723,1.24e-09,91;CL:0000048,1.24e-09,91;CL:0000763,2.59e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.62e-07,3;DOID:4045,8.62e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.44e-13,46;UBERON:0000344,1.31e-10,15;UBERON:0002371,5.86e-09,16;UBERON:0002204,9.41e-09,32;UBERON:0001242,4.42e-08,13;UBERON:0001262,4.42e-08,13;UBERON:0004786,4.42e-08,13;UBERON:0001474,3.56e-07,22;UBERON:0004765,3.56e-07,22;UBERON:0001434,3.56e-07,22 | |||
|phase1_expression=2.40223270657191,1.04692622291808,0.454999239389536,0.30246421130683,0,1.00727563147134,4.67225281191051,0.129123323441576,0.703943610758334,1.40438715793196,1.02730780935303,1.51567102091139,0,0.0874204024189974,0,4.25198061518635,2.09868563438444,2.99689057090326,3.01651753932625,4.2438965179803,0,0,17.2391860831697,7.03966660290989,5.50582274561208,1.14846392823004,0.86152399231815,0.861884930743556,3.80046838912748,1.00812051903972,1.77384408524244,0,0,0,5.48818077527422,6.4831511689812,2.45003227514843,47.7126059040075,39.8481025707138,27.7467584306113,27.0586484494267,19.8083190637949,20.3914348273085,0.755380907853464,1.01376931219515,0.550640256485045,0,0.218025156380447,0,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0,2.1314403448383,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908714319998209,1.5870027622425,129.56942644965,112.715527884562,0,1.07940638327563,0,0,0.421333260395256,0.681721290312231,15.5871602761721,19.0803370235584,0.563373679106722,2.56652954828636,2.54805239706646,0,5.41227602528035,3.04031838570118,2.52762222507392,0.22836775943812,0.517875767294343,0.29688427812965,0,0,0,0,0.117588707135705,0,0,0.289198713839823,0,0.323533699894818,0,0,1.86391761218122,0,0,0.255457055208591,9.10594946244994,14.3976655438418,10.2926883929182,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0.219195732427575,0.834141747676794,0.348252166522167,0.61734640922383,0,3.51106593656617,11.5806558201622,0,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0,0.465067889500816,0,0,0.329119699826961,0.164167464079095,0.486412857275134,0,0.439100230582101,0.805238512562231,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,1.1858105083486,0,0,0,0,0.482354319504834,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,1.01031551178845,1.07638448113147,0.964887042726734,0.554259570499814,0,0,0,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,0.630540576424764,0.664394068946325,0.159454768657487,0.81931657357869,0.690739927463582,0.144649058581512,134.204242705952,126.186118645941,0,0,0,0,0.327869890753351,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0,0.425820255624806,0,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0,0.316036757935816,0,1.03135543248187,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0.120625849856312,0.358117032009409,0.164140899745061,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0.376736914009382,0.27338845544205,0.228778173206523,10.8786195196067,11.1961161858926,11.0559979043539,0,0,0.203319467126849,0.216010681643603,0.627264888043406,0.436725127492355,0.134864346384821,0.247960367176008,0,0,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0.405450430580328,0.616265742988964,0.129920822977795,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0.226730383615211,0.221985953374065,0,0.335769232728157,0.579568782096571,0.375364950902364,0,0.428736758158132,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0 | |||
|short_description=p1@Gm5331 | |||
}} |
Revision as of 13:51, 14 September 2013
Short description: | p1@Gm5331 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm5331_5end |
Coexpression cluster: | MCL_coexpression_mm9:308 |
Association with transcript: | 0bp_to_ENSMUST00000048361_5end |
EntrezGene: | Gm5331 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 8.44e-13 | 46 |
mesenchymal cell | 8.44e-13 | 46 |
stem cell | 2.02e-11 | 97 |
motile cell | 4.08e-11 | 54 |
common myeloid progenitor | 5.67e-11 | 19 |
epithelial cell | 6.54e-11 | 25 |
endodermal cell | 7.94e-11 | 20 |
endo-epithelial cell | 1.04e-10 | 15 |
hematopoietic cell | 6.55e-10 | 32 |
hematopoietic oligopotent progenitor cell | 6.55e-10 | 32 |
hematopoietic stem cell | 6.55e-10 | 32 |
hematopoietic multipotent progenitor cell | 6.55e-10 | 32 |
somatic stem cell | 1.24e-09 | 91 |
multi fate stem cell | 1.24e-09 | 91 |
myeloid cell | 2.59e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.44e-13 | 46 |
mucosa | 1.31e-10 | 15 |
bone marrow | 5.86e-09 | 16 |
musculoskeletal system | 9.41e-09 | 32 |
intestinal mucosa | 4.42e-08 | 13 |
wall of intestine | 4.42e-08 | 13 |
gastrointestinal system mucosa | 4.42e-08 | 13 |
bone element | 3.56e-07 | 22 |
skeletal element | 3.56e-07 | 22 |
skeletal system | 3.56e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.62e-07 | 3 |
muscle cancer | 8.62e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.