FFCP PHASE1:Mm9::chr8:117710565..117710568,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:117710565..117710568,+|id=chr8:117710565..117710568,+|ontology_enrichment_celltype=CL:0000239!5.15e-29!6;CL:0000677!5.15e-29!6;CL:0000212!5.15e-29!6;CL:0000584!5.15e-29!6;CL:0000075!6.87e-25!7;CL:0002563!2.22e-19!9;CL:0002251!2.22e-19!9;CL:0002076!1.23e-11!15;CL:0000066!1.14e-09!25;CL:0000223!1.03e-08!20|ontology_enrichment_celltype_v019_2=CL:0000239,6.66e-30,6;CL:0000677,6.66e-30,6;CL:0000584,6.66e-30,6;CL:0000075,7.57e-26,7;CL:0002563,1.98e-20,9;CL:0002251,1.98e-20,9;CL:0002076,8.25e-13,15;CL:0000223,6.23e-10,20;CL:0000066,3.41e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!8.58e-29!15;UBERON:0001242!9.72e-26!13;UBERON:0000060!9.72e-26!13;UBERON:0001262!9.72e-26!13;UBERON:0004786!9.72e-26!13;UBERON:0003350!2.22e-19!9;UBERON:0004808!2.22e-19!9;UBERON:0001277!2.22e-19!9;UBERON:0000160!3.19e-18!43;UBERON:0004923!8.83e-18!24;UBERON:0000485!7.25e-16!11;UBERON:0005409!5.39e-13!59;UBERON:0000331!3.30e-10!3;UBERON:0002116!3.30e-10!3;UBERON:0001204!3.30e-10!3;UBERON:0001168!3.30e-10!3;UBERON:0003199!6.57e-08!1|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.98e-20,9;UBERON:0004808,1.98e-20,9;UBERON:0001277,1.98e-20,9;UBERON:0000485,5.67e-17,11;UBERON:0001242,1.42e-14,13;UBERON:0001262,1.42e-14,13;UBERON:0004786,1.42e-14,13;UBERON:0000344,8.25e-13,15;UBERON:0004923,1.75e-08,24;UBERON:0000160,7.72e-07,31|phase1_expression=0,0.348975407639361,0.909998478779072,5.14189159221611,4.50806156951712,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0.215471232685889,0.380046838912748,0.756090389279792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:117710565..117710568,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:117710565..117710568,+ | |||
|id=chr8:117710565..117710568,+ | |||
|ontology_enrichment_celltype=CL:0000239!5.15e-29!6;CL:0000677!5.15e-29!6;CL:0000212!5.15e-29!6;CL:0000584!5.15e-29!6;CL:0000075!6.87e-25!7;CL:0002563!2.22e-19!9;CL:0002251!2.22e-19!9;CL:0002076!1.23e-11!15;CL:0000066!1.14e-09!25;CL:0000223!1.03e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.66e-30,6;CL:0000677,6.66e-30,6;CL:0000584,6.66e-30,6;CL:0000075,7.57e-26,7;CL:0002563,1.98e-20,9;CL:0002251,1.98e-20,9;CL:0002076,8.25e-13,15;CL:0000223,6.23e-10,20;CL:0000066,3.41e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.58e-29!15;UBERON:0001242!9.72e-26!13;UBERON:0000060!9.72e-26!13;UBERON:0001262!9.72e-26!13;UBERON:0004786!9.72e-26!13;UBERON:0003350!2.22e-19!9;UBERON:0004808!2.22e-19!9;UBERON:0001277!2.22e-19!9;UBERON:0000160!3.19e-18!43;UBERON:0004923!8.83e-18!24;UBERON:0000485!7.25e-16!11;UBERON:0005409!5.39e-13!59;UBERON:0000331!3.30e-10!3;UBERON:0002116!3.30e-10!3;UBERON:0001204!3.30e-10!3;UBERON:0001168!3.30e-10!3;UBERON:0003199!6.57e-08!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.98e-20,9;UBERON:0004808,1.98e-20,9;UBERON:0001277,1.98e-20,9;UBERON:0000485,5.67e-17,11;UBERON:0001242,1.42e-14,13;UBERON:0001262,1.42e-14,13;UBERON:0004786,1.42e-14,13;UBERON:0000344,8.25e-13,15;UBERON:0004923,1.75e-08,24;UBERON:0000160,7.72e-07,31 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,5.14189159221611,4.50806156951712,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0.215471232685889,0.380046838912748,0.756090389279792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:117710565..117710568,+ | |||
}} |
Revision as of 14:51, 14 September 2013
Short description: | p@chr8:117710565..117710568, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:117710565..117710568, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.66e-30 | 6 |
gut absorptive cell | 6.66e-30 | 6 |
enterocyte | 6.66e-30 | 6 |
columnar/cuboidal epithelial cell | 7.57e-26 | 7 |
intestinal epithelial cell | 1.98e-20 | 9 |
epithelial cell of alimentary canal | 1.98e-20 | 9 |
endo-epithelial cell | 8.25e-13 | 15 |
endodermal cell | 6.23e-10 | 20 |
epithelial cell | 3.41e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.98e-20 | 9 |
gastrointestinal system epithelium | 1.98e-20 | 9 |
intestinal epithelium | 1.98e-20 | 9 |
simple columnar epithelium | 5.67e-17 | 11 |
intestinal mucosa | 1.42e-14 | 13 |
wall of intestine | 1.42e-14 | 13 |
gastrointestinal system mucosa | 1.42e-14 | 13 |
mucosa | 8.25e-13 | 15 |
organ component layer | 1.75e-08 | 24 |
intestine | 7.72e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.