FFCP PHASE1:Mm9::chr8:127093745..127093767,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11606|HGNC=|MCL_coexpression_id=246|UniProt=Q3UTR7|association_with_transcript=-138bp_to_NM_007428,uc009nxe.1_5end|description=CAGE_peak_2_at_Agt_5end|id=chr8:127093745..127093767,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!5.01e-12!22;UBERON:0007499!5.01e-12!22;UBERON:0006925!5.01e-12!22;UBERON:0009497!5.01e-12!22;UBERON:0000015!5.01e-12!22;UBERON:0002423!5.01e-12!22;UBERON:0006235!5.01e-12!22;UBERON:0008835!5.01e-12!22;UBERON:0003894!5.01e-12!22;UBERON:0004161!5.01e-12!22;UBERON:0008836!5.01e-12!22;UBERON:0002365!3.12e-11!25;UBERON:0002330!3.12e-11!25;UBERON:0009854!4.54e-11!23;UBERON:0009856!4.54e-11!23;UBERON:0005172!3.26e-10!49;UBERON:0005173!3.26e-10!49;UBERON:0002417!3.26e-10!49;UBERON:0000916!3.26e-10!49|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.63e-20,22;UBERON:0007499,8.63e-20,22;UBERON:0006925,8.63e-20,22;UBERON:0009497,8.63e-20,22;UBERON:0000015,8.63e-20,22;UBERON:0002423,8.63e-20,22;UBERON:0006235,8.63e-20,22;UBERON:0008835,8.63e-20,22;UBERON:0003894,8.63e-20,22;UBERON:0004161,8.63e-20,22;UBERON:0008836,8.63e-20,22;UBERON:0009854,1.23e-18,23;UBERON:0009856,1.23e-18,23;UBERON:0002365,1.30e-16,25;UBERON:0002330,1.30e-16,25;UBERON:0005172,1.07e-11,49;UBERON:0005173,1.07e-11,49;UBERON:0002417,1.07e-11,49;UBERON:0000916,1.07e-11,49;UBERON:0005256,2.01e-09,45;UBERON:0005177,1.04e-08,79;UBERON:0003104,7.18e-08,61;UBERON:0009142,7.18e-08,61;UBERON:0000949,1.45e-07,72;UBERON:0009569,9.99e-07,66|phase1_expression=0.160148847104794,0,0,0,0,1.6787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,0.91763712426868,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0.866554859253824,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0,0,1.15945795480671,0,0,1.61910957491345,1.29955283489534,1.34408066129201,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,2.60227990149204,3.04465478312141,4.38169444786511,0.904335843315735,0.23517741427141,0.125666591329675,116.923219738359,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.766371165625774,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0.248813941220186,0.758168275301024,0,0,0,0,1.9591626318643,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.05780226665418,0.426576501070468,0.928946687441754,0.644337306610467,0.201683524623343,0,0.190225626112559,0.949058123089023,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,4.49409704327111,1.29682829924817,0.995706366271836,0.379335801906163,0.456994050438915,0,0,1.16371492300575,1.05203729835478,3.22506339333712,1.77132177575523,0.156998727841375,0.863780147452604,1.48226313543574,12.0128476115588,30.0735262523201,37.1022485435009,60.4523161737739,71.3884392867154,51.1797962080654,23.3033871335157,9.89024883327716,9.60964946158285,11.5014565221884,10.7920874823866,8.7370548472077,4.2938409251009,1.79397413521912,5.78932225636041,0,0.568474235311454,0.162964976442026,0.339490171550376,0,0,0,0,0.472905432318573,0.221464689648775,0,0,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0,0.252470927204373,0.631016438832513,0,0.646270193198397,1.43381278771531,0.668396022247182,0.283076530788832,0.809621403349789,0.292255857911312,0,0,0.567760340833074,0.534196811001766,0,0,0,3.64170954232472,1.81394134178851,1.13163047853539,1.18120757152309,1.22974059177571,0.775284879504663,5.08947221268508,2.13898427030833,0,0,0,0,0,0,0,0,0,0,0,0,8.47328283455281,0,0,0,0,0,0,2.91480836629851,0.18542530201051,0,0.619160603889667,0,0,0,0,0,0,0,1.90934123603023,0.316335993581135,2.03319467126849,0.432021363287205,0,0.436725127492355,0.674321731924103,1.32245529160537,1.04702376793612,0.388844919875379,0.621339313086926,0.56369293868419,0,0.330916980914195,0.194451188344048,0.645799117388655,0.337912250981556,0,0.5208175393758,0,0.483168241652012,0,0.316011120628178,0.608175645870493,0,0,0,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0.201652370273681,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,4.26834014385335,11.6691224192781,6.49800804146745,4.77993121970037,2.889207461421,3.5025959730612,4.49286893428541,2.27427490587418,1.2673964994512,2.64076877940507,1.40462261204824,2.30490548657529,2.46972516509137,5.23923060411381,1.27472758539341,1.54327376370964,1.64834360321323,1.91358596174717,3.08582327146874,2.48466128623072,1.66905332963125,2.32554266611726,2.35273451038327,2.62305284464197,4.39027134894654,3.6829759601298,2.8518863907631,3.92799590160417,2.37270036248348,2.56111654176465,2.04615521584845,2.16911577660352,2.50778594275484,0,0.935726433781634,1.50409737833809,0,0.220591419119515,0.231867835620421|short_description=p2@Agt}} | ||
|EntrezGene=11606 | |||
|HGNC= | |||
|MCL_coexpression_id=246 | |||
|UniProt=Q3UTR7 | |||
|association_with_transcript=-138bp_to_NM_007428,uc009nxe.1_5end | |||
|description=CAGE_peak_2_at_Agt_5end | |||
|id=chr8:127093745..127093767,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.01e-12!22;UBERON:0007499!5.01e-12!22;UBERON:0006925!5.01e-12!22;UBERON:0009497!5.01e-12!22;UBERON:0000015!5.01e-12!22;UBERON:0002423!5.01e-12!22;UBERON:0006235!5.01e-12!22;UBERON:0008835!5.01e-12!22;UBERON:0003894!5.01e-12!22;UBERON:0004161!5.01e-12!22;UBERON:0008836!5.01e-12!22;UBERON:0002365!3.12e-11!25;UBERON:0002330!3.12e-11!25;UBERON:0009854!4.54e-11!23;UBERON:0009856!4.54e-11!23;UBERON:0005172!3.26e-10!49;UBERON:0005173!3.26e-10!49;UBERON:0002417!3.26e-10!49;UBERON:0000916!3.26e-10!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.63e-20,22;UBERON:0007499,8.63e-20,22;UBERON:0006925,8.63e-20,22;UBERON:0009497,8.63e-20,22;UBERON:0000015,8.63e-20,22;UBERON:0002423,8.63e-20,22;UBERON:0006235,8.63e-20,22;UBERON:0008835,8.63e-20,22;UBERON:0003894,8.63e-20,22;UBERON:0004161,8.63e-20,22;UBERON:0008836,8.63e-20,22;UBERON:0009854,1.23e-18,23;UBERON:0009856,1.23e-18,23;UBERON:0002365,1.30e-16,25;UBERON:0002330,1.30e-16,25;UBERON:0005172,1.07e-11,49;UBERON:0005173,1.07e-11,49;UBERON:0002417,1.07e-11,49;UBERON:0000916,1.07e-11,49;UBERON:0005256,2.01e-09,45;UBERON:0005177,1.04e-08,79;UBERON:0003104,7.18e-08,61;UBERON:0009142,7.18e-08,61;UBERON:0000949,1.45e-07,72;UBERON:0009569,9.99e-07,66 | |||
|phase1_expression=0.160148847104794,0,0,0,0,1.6787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,0.91763712426868,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0.866554859253824,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0,0,1.15945795480671,0,0,1.61910957491345,1.29955283489534,1.34408066129201,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,2.60227990149204,3.04465478312141,4.38169444786511,0.904335843315735,0.23517741427141,0.125666591329675,116.923219738359,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.766371165625774,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0.248813941220186,0.758168275301024,0,0,0,0,1.9591626318643,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.05780226665418,0.426576501070468,0.928946687441754,0.644337306610467,0.201683524623343,0,0.190225626112559,0.949058123089023,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,4.49409704327111,1.29682829924817,0.995706366271836,0.379335801906163,0.456994050438915,0,0,1.16371492300575,1.05203729835478,3.22506339333712,1.77132177575523,0.156998727841375,0.863780147452604,1.48226313543574,12.0128476115588,30.0735262523201,37.1022485435009,60.4523161737739,71.3884392867154,51.1797962080654,23.3033871335157,9.89024883327716,9.60964946158285,11.5014565221884,10.7920874823866,8.7370548472077,4.2938409251009,1.79397413521912,5.78932225636041,0,0.568474235311454,0.162964976442026,0.339490171550376,0,0,0,0,0.472905432318573,0.221464689648775,0,0,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0,0.252470927204373,0.631016438832513,0,0.646270193198397,1.43381278771531,0.668396022247182,0.283076530788832,0.809621403349789,0.292255857911312,0,0,0.567760340833074,0.534196811001766,0,0,0,3.64170954232472,1.81394134178851,1.13163047853539,1.18120757152309,1.22974059177571,0.775284879504663,5.08947221268508,2.13898427030833,0,0,0,0,0,0,0,0,0,0,0,0,8.47328283455281,0,0,0,0,0,0,2.91480836629851,0.18542530201051,0,0.619160603889667,0,0,0,0,0,0,0,1.90934123603023,0.316335993581135,2.03319467126849,0.432021363287205,0,0.436725127492355,0.674321731924103,1.32245529160537,1.04702376793612,0.388844919875379,0.621339313086926,0.56369293868419,0,0.330916980914195,0.194451188344048,0.645799117388655,0.337912250981556,0,0.5208175393758,0,0.483168241652012,0,0.316011120628178,0.608175645870493,0,0,0,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0.201652370273681,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,4.26834014385335,11.6691224192781,6.49800804146745,4.77993121970037,2.889207461421,3.5025959730612,4.49286893428541,2.27427490587418,1.2673964994512,2.64076877940507,1.40462261204824,2.30490548657529,2.46972516509137,5.23923060411381,1.27472758539341,1.54327376370964,1.64834360321323,1.91358596174717,3.08582327146874,2.48466128623072,1.66905332963125,2.32554266611726,2.35273451038327,2.62305284464197,4.39027134894654,3.6829759601298,2.8518863907631,3.92799590160417,2.37270036248348,2.56111654176465,2.04615521584845,2.16911577660352,2.50778594275484,0,0.935726433781634,1.50409737833809,0,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Agt | |||
}} |
Revision as of 15:08, 14 September 2013
Short description: | p2@Agt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Agt_5end |
Coexpression cluster: | MCL_coexpression_mm9:246 |
Association with transcript: | -138bp_to_NM_007428, uc009nxe.1_5end |
EntrezGene: | Agt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 8.63e-20 | 22 |
epithelial sac | 8.63e-20 | 22 |
digestive gland | 8.63e-20 | 22 |
epithelium of foregut-midgut junction | 8.63e-20 | 22 |
anatomical boundary | 8.63e-20 | 22 |
hepatobiliary system | 8.63e-20 | 22 |
foregut-midgut junction | 8.63e-20 | 22 |
hepatic diverticulum | 8.63e-20 | 22 |
liver primordium | 8.63e-20 | 22 |
septum transversum | 8.63e-20 | 22 |
liver bud | 8.63e-20 | 22 |
digestive tract diverticulum | 1.23e-18 | 23 |
sac | 1.23e-18 | 23 |
exocrine gland | 1.30e-16 | 25 |
exocrine system | 1.30e-16 | 25 |
abdomen element | 1.07e-11 | 49 |
abdominal segment element | 1.07e-11 | 49 |
abdominal segment of trunk | 1.07e-11 | 49 |
abdomen | 1.07e-11 | 49 |
trunk mesenchyme | 2.01e-09 | 45 |
trunk region element | 1.04e-08 | 79 |
mesenchyme | 7.18e-08 | 61 |
entire embryonic mesenchyme | 7.18e-08 | 61 |
endocrine system | 1.45e-07 | 72 |
subdivision of trunk | 9.99e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.