Personal tools

FFCP PHASE1:Mm9::chr8:73919693..73919720,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=234395|HGNC=|MCL_coexpression_id=94|UniProt=Q8R370|association_with_transcript=0bp_to_ENSMUST00000049184,NM_181418,uc009mcz.2,uc012gfr.1_5end|description=CAGE_peak_1_at_Ushbp1_5end|id=chr8:73919693..73919720,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!4.30e-13!85;UBERON:0009569!3.59e-12!66;UBERON:0000468!7.40e-10!333;UBERON:0005172!3.98e-08!49;UBERON:0005173!3.98e-08!49;UBERON:0002417!3.98e-08!49;UBERON:0000916!3.98e-08!49;UBERON:0005153!4.15e-08!17;UBERON:0002048!4.72e-08!14;UBERON:0000117!4.72e-08!14;UBERON:0000171!4.72e-08!14;UBERON:0000170!4.72e-08!14;UBERON:0005597!4.72e-08!14;UBERON:0000118!4.72e-08!14;UBERON:0002100!6.88e-08!98;UBERON:0000466!4.74e-07!79;UBERON:0000479!5.04e-07!349;UBERON:0005157!8.25e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.90e-14,79;UBERON:0009569,2.70e-12,66;UBERON:0002100,2.70e-09,90;UBERON:0005172,3.57e-08,49;UBERON:0005173,3.57e-08,49;UBERON:0002417,3.57e-08,49;UBERON:0000916,3.57e-08,49;UBERON:0005153,3.87e-08,17;UBERON:0002048,4.40e-08,14;UBERON:0000117,4.40e-08,14;UBERON:0000171,4.40e-08,14;UBERON:0000170,4.40e-08,14;UBERON:0005597,4.40e-08,14;UBERON:0000118,4.40e-08,14|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,1.21485160433896,0,0.157731082679119,0,0.42438965179803,19.2197835741418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,1.71920063963254,1.54701627683233,1.61853168687678,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0,3.21437798156281,3.10513658162888,2.94454945891935,4.85606673486466,3.09215957332259,2.32732518508413,1.43768206527355,1.83843757322004,2.20231761998777,3.83062014255563,3.68655679814984,2.1101806036831,3.56801810049398,4.16730696445408,3.90856198601933,2.8138130501584,4.12555268997387,3.53554302568401,2.84743361598206,3.54158947068071,0.530083353332288,0.0755715601067855,98.2640616698688,46.4628893569949,0,1.61910957491345,13.6453047664011,6.2723764193627,9.55022056895913,0,0,0,0.14084341977668,0,0,0,0,0,0,8.90634261808668,9.32176381129818,17.9614988268438,6.59244241711316,9.13396434936424,8.99400439298628,8.89263579260473,12.2292255421133,16.7136566468468,6.92145909656247,36.4390379438177,6.19227386364912,14.235482795372,16.1214308476087,16.4857586065976,3.72783522436244,3.22058876712702,3.35114730901528,3.0654846625031,0,0,0,6.5907881338122,4.11750542536764,1.63350657746724,3.47648640384553,3.83573185995496,4.36354893575076,5.02947915510049,6.00852246716866,16.9193480029727,1.0108910337347,5.05060454127538,4.29397461776922,0.689706313300419,1.98068342785884,3.76762044589288,4.08218994907967,4.22775276940004,3.37326208415024,6.98499100995342,1.29340795759705,2.64748512234947,4.57472922826267,4.82230611340665,8.06337022754234,8.00979983000983,9.87754254758129,6.96619933864726,0,0,0,2.89976081549703,1.87620847984877,6.12211008967451,9.70653415899362,14.3637889175605,17.123649530499,24.1835302540424,19.8522317035718,15.7633212195679,19.9117418395311,63.5328085986099,66.881767875331,64.7665944294222,48.5205754793222,74.8871816682874,3.78521907415429,3.2929475961371,0.660837565967596,2.3800550999719,4.05247676016945,5.34144345279009,5.67016829817211,5.64713868945359,5.78182913996663,7.03834816616469,3.32170343081158,3.62337700392824,9.80207314321051,9.54991065797524,6.04388670069272,8.98819408654222,3.6743468478698,6.96994456390285,3.41402221715547,9.71112357182695,13.5249282807697,16.4957575554705,17.6496763322539,14.4479788974056,26.6858186664366,23.1747932327975,23.3928104483648,20.6073263749407,10.9687472022245,3.00321190288969,3.53806191203765,3.14806957338795,2.84004169943904,6.02942899381042,9.42115651591253,10.9324532231308,11.5116011010275,9.06052663520669,31.629005436018,21.2120340171047,20.2824487524464,15.6598904327209,11.1226396383586,13.9908621195376,66.1416420796445,3.22135400009824,9.61493361007953,13.2401166904647,22.9996443322732,30.3186325969687,30.2315423925237,25.3673742215138,47.2905432318573,57.3593546190327,47.6769758285886,72.0998584749247,70.1101026375536,75.217510462386,0,0,17.2117495556663,17.1080782708934,6.74312477948726,6.32943107597897,0,31.811336827751,0,0,0,0,0,0,0,0,0,4.17717711348349,11.639086987078,6.58842733568844,6.67836533349662,12.3727592229402,5.30980553359851,5.34117399540959,5.44182402536552,7.54420319023592,5.31543407185391,11.0676653259814,8.78656196771952,13.4507479906677,14.9728898921583,10.7452497698177,7.37930260024991,9.28219889233682,5.7874732978144,3.78128297465751,5.56242340265844,6.64444808597936,8.86701168211368,8.56170324489939,10.86023535974,4.56697423671899,13.6109590676952,6.14313005505079,1.32317038832977,10.3878339353132,10.333723308538,7.90099316558842,7.5204576721976,9.52017218521355,10.2018292820448,5.37733375830478,1.87957968877638,13.8279201535359,12.9636169158798,6.40452753815949,4.23752105935178,4.57556346413045,0,0,0,6.68269432610579,4.4287039101359,6.30290348093231,5.50827238191186,8.36353184057875,8.51613998610093,6.74321731924104,10.9102561557443,5.75863072364865,4.66613903850454,3.72803587852155,0,5.23307911153926,2.64733584731356,6.02798683866548,2.97067593998782,4.89972763923257,4.10750335260139,3.1249052362548,2.09718688851422,1.69108884578204,7.20075015644664,1.58005560314089,2.02725215290164,5.23825881540619,3.11809975146708,3.04345382634718,1.98681354781265,1.80293174279953,3.10148007066612,3.73575864808146,2.66723823292499,2.82313318383153,1.65678397257579,2.02044867444692,2.45441494581295,15.1909357022192,0,0,0,11.204996453867,13.8885031833875,10.9890974560359,6.00231461421384,3.00943262421218,2.82375921308533,5.9842280745933,3.43737308063638,6.53042092906013,0.685082519770642,4.5323633843382,2.02506750069542,1.80128481289688,1.81256963593682,1.55328093525546,1.97195960409936,3.99024873401031,3.24393850932855,7.53630822911712,3.98265008993166,3.8607136774503,11.1123363900808,10.7138229764225,10.5903339165299,14.4037410705365,12.1670063947315,10.7517014590063,15.2635657175908,12.0367286521154,10.9701745705221,11.4310485907938,12.3996228760995,8.87382414133043,9.89006161927936,11.0399190100798,16.1148548621145,13.133209655791,12.3986818772607,14.6799880798652,10.3520318456864,12.2691181442931,11.1586063452391,8.15516105457313,12.3581743599734,7.85599180320834,8.42308628681636,9.45643030805409,11.0492381655816,12.0850736125053,10.2240503820005,7.24450676020043,14.0358965067245,11.1732948105115,19.511409871022,21.838550492832,26.432933260728|short_description=p1@Ushbp1}}
|EntrezGene=234395
|HGNC=
|MCL_coexpression_id=94
|UniProt=Q8R370
|association_with_transcript=0bp_to_ENSMUST00000049184,NM_181418,uc009mcz.2,uc012gfr.1_5end
|description=CAGE_peak_1_at_Ushbp1_5end
|id=chr8:73919693..73919720,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005177!4.30e-13!85;UBERON:0009569!3.59e-12!66;UBERON:0000468!7.40e-10!333;UBERON:0005172!3.98e-08!49;UBERON:0005173!3.98e-08!49;UBERON:0002417!3.98e-08!49;UBERON:0000916!3.98e-08!49;UBERON:0005153!4.15e-08!17;UBERON:0002048!4.72e-08!14;UBERON:0000117!4.72e-08!14;UBERON:0000171!4.72e-08!14;UBERON:0000170!4.72e-08!14;UBERON:0005597!4.72e-08!14;UBERON:0000118!4.72e-08!14;UBERON:0002100!6.88e-08!98;UBERON:0000466!4.74e-07!79;UBERON:0000479!5.04e-07!349;UBERON:0005157!8.25e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.90e-14,79;UBERON:0009569,2.70e-12,66;UBERON:0002100,2.70e-09,90;UBERON:0005172,3.57e-08,49;UBERON:0005173,3.57e-08,49;UBERON:0002417,3.57e-08,49;UBERON:0000916,3.57e-08,49;UBERON:0005153,3.87e-08,17;UBERON:0002048,4.40e-08,14;UBERON:0000117,4.40e-08,14;UBERON:0000171,4.40e-08,14;UBERON:0000170,4.40e-08,14;UBERON:0005597,4.40e-08,14;UBERON:0000118,4.40e-08,14
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,1.21485160433896,0,0.157731082679119,0,0.42438965179803,19.2197835741418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,1.71920063963254,1.54701627683233,1.61853168687678,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0,3.21437798156281,3.10513658162888,2.94454945891935,4.85606673486466,3.09215957332259,2.32732518508413,1.43768206527355,1.83843757322004,2.20231761998777,3.83062014255563,3.68655679814984,2.1101806036831,3.56801810049398,4.16730696445408,3.90856198601933,2.8138130501584,4.12555268997387,3.53554302568401,2.84743361598206,3.54158947068071,0.530083353332288,0.0755715601067855,98.2640616698688,46.4628893569949,0,1.61910957491345,13.6453047664011,6.2723764193627,9.55022056895913,0,0,0,0.14084341977668,0,0,0,0,0,0,8.90634261808668,9.32176381129818,17.9614988268438,6.59244241711316,9.13396434936424,8.99400439298628,8.89263579260473,12.2292255421133,16.7136566468468,6.92145909656247,36.4390379438177,6.19227386364912,14.235482795372,16.1214308476087,16.4857586065976,3.72783522436244,3.22058876712702,3.35114730901528,3.0654846625031,0,0,0,6.5907881338122,4.11750542536764,1.63350657746724,3.47648640384553,3.83573185995496,4.36354893575076,5.02947915510049,6.00852246716866,16.9193480029727,1.0108910337347,5.05060454127538,4.29397461776922,0.689706313300419,1.98068342785884,3.76762044589288,4.08218994907967,4.22775276940004,3.37326208415024,6.98499100995342,1.29340795759705,2.64748512234947,4.57472922826267,4.82230611340665,8.06337022754234,8.00979983000983,9.87754254758129,6.96619933864726,0,0,0,2.89976081549703,1.87620847984877,6.12211008967451,9.70653415899362,14.3637889175605,17.123649530499,24.1835302540424,19.8522317035718,15.7633212195679,19.9117418395311,63.5328085986099,66.881767875331,64.7665944294222,48.5205754793222,74.8871816682874,3.78521907415429,3.2929475961371,0.660837565967596,2.3800550999719,4.05247676016945,5.34144345279009,5.67016829817211,5.64713868945359,5.78182913996663,7.03834816616469,3.32170343081158,3.62337700392824,9.80207314321051,9.54991065797524,6.04388670069272,8.98819408654222,3.6743468478698,6.96994456390285,3.41402221715547,9.71112357182695,13.5249282807697,16.4957575554705,17.6496763322539,14.4479788974056,26.6858186664366,23.1747932327975,23.3928104483648,20.6073263749407,10.9687472022245,3.00321190288969,3.53806191203765,3.14806957338795,2.84004169943904,6.02942899381042,9.42115651591253,10.9324532231308,11.5116011010275,9.06052663520669,31.629005436018,21.2120340171047,20.2824487524464,15.6598904327209,11.1226396383586,13.9908621195376,66.1416420796445,3.22135400009824,9.61493361007953,13.2401166904647,22.9996443322732,30.3186325969687,30.2315423925237,25.3673742215138,47.2905432318573,57.3593546190327,47.6769758285886,72.0998584749247,70.1101026375536,75.217510462386,0,0,17.2117495556663,17.1080782708934,6.74312477948726,6.32943107597897,0,31.811336827751,0,0,0,0,0,0,0,0,0,4.17717711348349,11.639086987078,6.58842733568844,6.67836533349662,12.3727592229402,5.30980553359851,5.34117399540959,5.44182402536552,7.54420319023592,5.31543407185391,11.0676653259814,8.78656196771952,13.4507479906677,14.9728898921583,10.7452497698177,7.37930260024991,9.28219889233682,5.7874732978144,3.78128297465751,5.56242340265844,6.64444808597936,8.86701168211368,8.56170324489939,10.86023535974,4.56697423671899,13.6109590676952,6.14313005505079,1.32317038832977,10.3878339353132,10.333723308538,7.90099316558842,7.5204576721976,9.52017218521355,10.2018292820448,5.37733375830478,1.87957968877638,13.8279201535359,12.9636169158798,6.40452753815949,4.23752105935178,4.57556346413045,0,0,0,6.68269432610579,4.4287039101359,6.30290348093231,5.50827238191186,8.36353184057875,8.51613998610093,6.74321731924104,10.9102561557443,5.75863072364865,4.66613903850454,3.72803587852155,0,5.23307911153926,2.64733584731356,6.02798683866548,2.97067593998782,4.89972763923257,4.10750335260139,3.1249052362548,2.09718688851422,1.69108884578204,7.20075015644664,1.58005560314089,2.02725215290164,5.23825881540619,3.11809975146708,3.04345382634718,1.98681354781265,1.80293174279953,3.10148007066612,3.73575864808146,2.66723823292499,2.82313318383153,1.65678397257579,2.02044867444692,2.45441494581295,15.1909357022192,0,0,0,11.204996453867,13.8885031833875,10.9890974560359,6.00231461421384,3.00943262421218,2.82375921308533,5.9842280745933,3.43737308063638,6.53042092906013,0.685082519770642,4.5323633843382,2.02506750069542,1.80128481289688,1.81256963593682,1.55328093525546,1.97195960409936,3.99024873401031,3.24393850932855,7.53630822911712,3.98265008993166,3.8607136774503,11.1123363900808,10.7138229764225,10.5903339165299,14.4037410705365,12.1670063947315,10.7517014590063,15.2635657175908,12.0367286521154,10.9701745705221,11.4310485907938,12.3996228760995,8.87382414133043,9.89006161927936,11.0399190100798,16.1148548621145,13.133209655791,12.3986818772607,14.6799880798652,10.3520318456864,12.2691181442931,11.1586063452391,8.15516105457313,12.3581743599734,7.85599180320834,8.42308628681636,9.45643030805409,11.0492381655816,12.0850736125053,10.2240503820005,7.24450676020043,14.0358965067245,11.1732948105115,19.511409871022,21.838550492832,26.432933260728
|short_description=p1@Ushbp1
}}

Revision as of 16:01, 14 September 2013

Short description:p1@Ushbp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ushbp1_5end
Coexpression cluster:MCL_coexpression_mm9:94
Association with transcript: 0bp_to_ENSMUST00000049184, NM_181418, uc009mcz.2, uc012gfr.1_5end
EntrezGene:Ushbp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ushbp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.22
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G398.26
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F746.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.91
accessory axillary lymph node, adult.CNhs10475.1063-29H99.32
adrenal gland, adult.CNhs10508.49-24D717.96
adrenal gland, embryo E14.CNhs11038.406-44C56.59
adrenal gland, embryo E16.CNhs11004.1254-43D69.13
adrenal gland, embryo E17.CNhs11043.1263-45I18.99
adrenal gland, embryo E18.CNhs11026.1262-18F58.89
adrenal gland, neonate N00.CNhs11191.1311-23C112.23
adrenal gland, neonate N25.CNhs11223.1377-27I316.71
amnion, adult pregnant day17.5.CNhs10488.583-22A86.92
aorta, adult.CNhs10498.46-23H136.44
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F514.24
bone (os femoris), neonate N16.CNhs11225.1525-43A616.12
bone (os femoris), neonate N20.CNhs11195.1350-25C316.49
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.59
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B25.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.01
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.92
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C64.29
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C64.08
eyeball, neonate N01.CNhs11140.1532-43E74.23
eyeball, neonate N02.CNhs11205.1551-44G83.37
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E24.57
forelimb, embryo E14.CNhs10577.413-26A84.82
forelimb, embryo E15.CNhs11007.437-20E78.06
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B59.88
gonad, embryo E13.CNhs11044.1564-45I66.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I96.12
heart, embryo E14.CNhs10597.403-26D49.71
heart, embryo E15.CNhs11017.431-16C814.36
heart, embryo E16.CNhs11021.457-17C617.12
heart, embryo E17.CNhs11025.479-18E524.18
heart, embryo E18.CNhs11030.1283-20G319.85
heart, neonate N00.CNhs11213.639-21E315.76
heart, neonate N03.CNhs11221.1349-25I219.91
heart, neonate N10.CNhs11118.749-24G163.53
heart, neonate N16.CNhs11209.782-15G166.88
heart, neonate N20.CNhs11127.821-26I664.77
heart, neonate N25.CNhs11196.1351-25D348.52
heart, neonate N30.CNhs11202.1390-42D274.89
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G13.29
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D85.67
intestine, embryo E16.CNhs10585.463-22H45.65
intestine, embryo E17.CNhs10582.482-18D35.78
intestine, embryo E18.CNhs10526.1289-20F77.04
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E93.62
intestine, neonate N06.CNhs11102.688-20B89.80
intestine, neonate N07.CNhs11095.720-20F29.55
intestine, neonate N10.CNhs11098.755-23A56.04
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E33.67
intestine, neonate N30.CNhs11131.1384-42G16.97
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F89.71
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I216.50
kidney, embryo E18.CNhs11001.1288-20C717.65
kidney, neonate N00.CNhs11214.646-21G714.45
kidney, neonate N10.CNhs11206.758-6D526.69
kidney, neonate N20.CNhs11113.832-19I123.17
kidney, neonate N25.CNhs11122.1353-25F323.39
kidney, neonate N30.CNhs11203.1385-42H120.61
liver, adult pregnant day01.CNhs10466.508-5B210.97
liver, embryo E12.CNhs10601.355-15F83.00
liver, embryo E13.CNhs10524.378-3H63.54
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F56.03
liver, embryo E17.CNhs10510.481-18A39.42
liver, embryo E18.CNhs10579.499-43G410.93
liver, neonate N00.CNhs11117.641-24F411.51
liver, neonate N03.CNhs11123.1345-25G29.06
liver, neonate N06.CNhs11101.684-20A831.63
liver, neonate N07.CNhs11103.716-20H221.21
liver, neonate N10.CNhs11115.751-24B920.28
liver, neonate N20.CNhs11220.823-25A315.66
liver, neonate N25.CNhs11198.1368-26H111.12
liver, neonate N30.CNhs11106.1382-42D113.99
lung, adult.CNhs10474.28-22B166.14
lung, embryo E12.CNhs10522.354-16G23.22
lung, embryo E14.CNhs10604.404-26F89.61
lung, embryo E15.CNhs11020.432-17C513.24
lung, embryo E16.CNhs10998.458-17B623.00
lung, embryo E17.CNhs10605.480-44A630.32
lung, embryo E18.CNhs10583.1287-20I630.23
lung, neonate N00.CNhs11224.640-42C625.37
lung, neonate N06.CNhs11212.683-20E547.29
lung, neonate N07.CNhs11111.715-19A357.36
lung, neonate N10.CNhs11219.750-23E647.68
lung, neonate N20.CNhs11109.822-18A472.10
lung, neonate N25.CNhs11119.1359-25C770.11
lung, neonate N30.CNhs11133.1394-42H275.22
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B617.21
mammary gland, adult pregnant day19.CNhs10476.588-5H217.11
medulla oblongata, adult.CNhs10477.17-12C26.74
medulla oblongata, neonate N30.CNhs11200.1396-42A36.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C231.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I711.64
ovary, embryo E18.CNhs11040.505-44H76.59
ovary, neonate N00.CNhs11217.1299-22I46.68
oviduct, adult pregnant day01.CNhs10500.988-6G612.37
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F45.34
pancreas, embryo E15.CNhs11042.1556-45F25.44
pancreas, embryo E16.CNhs11003.460-26E57.54
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I711.07
pancreas, neonate N00.CNhs11105.645-26G98.79
pancreas, neonate N01.CNhs11138.1531-43D713.45
pancreas, neonate N02.CNhs11139.1539-43D814.97
pancreas, neonate N16.CNhs11136.787-43B610.75
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C75.56
pituitary gland, embryo E14.CNhs11037.398-44A56.64
pituitary gland, embryo E15.CNhs10592.427-16B98.87
pituitary gland, embryo E16.CNhs11036.449-43F68.56
pituitary gland, embryo E17.CNhs11039.1265-44F510.86
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I713.61
placenta, adult pregnant day17.CNhs10464.577-18G36.14
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C310.39
skin, neonate N00.CNhs11124.650-25G410.33
skin, neonate N03.CNhs11215.662-22H37.90
skin, neonate N06.CNhs11097.693-20I57.52
skin, neonate N10.CNhs11108.762-6C49.52
small intestine, neonate N16.CNhs11114.790-21I110.20
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C113.83
spleen, embryo E18.CNhs11011.1271-21F212.96
spleen, neonate N10.CNhs11116.752-24D16.40
spleen, neonate N20.CNhs11112.824-19H14.24
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G86.30
stomach, embryo E16.CNhs11022.459-17D45.51
stomach, embryo E17.CNhs11006.1035-18D58.36
stomach, embryo E18.CNhs10999.1286-20C68.52
stomach, neonate N03.CNhs11193.1340-24B86.74
stomach, neonate N07.CNhs11210.718-18A910.91
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I14.67
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F55.23
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G56.03
testis, embryo E17.CNhs11029.486-18I52.97
testis, embryo E18.CNhs11027.503-18G54.90
testis, neonate N00.CNhs11189.1300-22B74.11
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E27.20
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I25.24
thymus, embryo E16.CNhs11002.456-26C53.12
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C43.74
thymus, neonate N07.CNhs11211.713-19D32.67
thymus, neonate N10.CNhs11194.748-24E42.82
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G72.02
thymus, neonate N30.CNhs11132.1393-42G22.45
tongue, adult.CNhs10499.32-1B415.19
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E411.20
uterus, adult pregnant day19.CNhs10497.590-15F513.89
uterus, adult.CNhs10509.92-27E510.99
vagina, adult.CNhs10502.89-27D56.00
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D27.54
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.59
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.04
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.40
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.40
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.68
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.16
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.09
whole body, embryo E17.5.CNhs10513.490-9F910.22
whole body, embryo E17.CNhs10517.475-3I57.24
whole body, embryo E18.CNhs10516.493-3B314.04
whole body, neonate N00.CNhs10525.657-19C211.17
whole body, neonate N01.CNhs10576.659-23C619.51
whole body, neonate N06.CNhs10515.692-21D121.84
whole body, neonate N10.CNhs10518.761-6B426.43





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element2.90e-1479
subdivision of trunk2.70e-1266
trunk2.70e-0990
abdomen element3.57e-0849
abdominal segment element3.57e-0849
abdominal segment of trunk3.57e-0849
abdomen3.57e-0849
epithelial bud3.87e-0817
lung4.40e-0814
respiratory tube4.40e-0814
respiration organ4.40e-0814
pair of lungs4.40e-0814
lung primordium4.40e-0814
lung bud4.40e-0814







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:73919693..73919720,-&oldid=3055644"