FFCP PHASE1:Mm9::chr8:93340930..93340944,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=205|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:93340930..93340944,-|id=chr8:93340930..93340944,-|ontology_enrichment_celltype=CL:0002453!5.30e-10!8;CL:0000333!1.19e-07!10;CL:0000095!1.19e-07!10;CL:0000243!1.19e-07!10;CL:0000123!1.19e-07!10;CL:0000125!1.19e-07!10;CL:0000030!1.19e-07!10;CL:0000339!1.19e-07!10;CL:0000128!3.69e-07!6;CL:0000126!3.69e-07!6;CL:0000127!3.69e-07!6|ontology_enrichment_celltype_v019_2=CL:0002453,5.02e-54,8;CL:0000333,3.14e-43,10;CL:0000095,3.14e-43,10;CL:0000243,3.14e-43,10;CL:0000123,3.14e-43,10;CL:0000125,3.14e-43,10;CL:0000030,3.14e-43,10;CL:0000339,3.14e-43,10;CL:0000128,5.82e-37,6;CL:0000126,5.82e-37,6;CL:0000127,5.82e-37,6;CL:0002605,3.79e-19,2;CL:0002604,3.79e-19,2;CL:0000878,5.72e-19,2;CL:0000129,5.72e-19,2;CL:0002319,8.13e-13,43;CL:0000221,1.62e-12,44;CL:0000133,1.62e-12,44;CL:0002194,5.65e-10,4;CL:0000766,5.65e-10,4;CL:0000234,5.65e-10,4;CL:0000576,5.65e-10,4;CL:0000235,5.65e-10,4;CL:0000864,5.65e-10,4;CL:0002009,5.65e-10,4;CL:0000040,5.65e-10,4;CL:0000559,5.65e-10,4;CL:0000219,8.02e-08,54;CL:0002321,1.07e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.34e-11!73;UBERON:0005743!4.34e-11!73;UBERON:0000073!1.49e-10!75;UBERON:0001016!1.49e-10!75;UBERON:0001049!7.62e-10!52;UBERON:0005068!7.62e-10!52;UBERON:0006241!7.62e-10!52;UBERON:0007135!7.62e-10!52;UBERON:0000955!5.10e-09!50;UBERON:0006238!5.10e-09!50;UBERON:0002048!1.41e-08!14;UBERON:0000117!1.41e-08!14;UBERON:0000171!1.41e-08!14;UBERON:0000170!1.41e-08!14;UBERON:0005597!1.41e-08!14;UBERON:0000118!1.41e-08!14;UBERON:0002616!2.63e-08!49;UBERON:0003076!3.06e-08!12;UBERON:0003057!3.06e-08!12;UBERON:0005178!4.94e-08!17;UBERON:0005181!4.94e-08!17;UBERON:0002224!4.94e-08!17;UBERON:0000915!4.94e-08!17;UBERON:0008947!4.94e-08!17;UBERON:0003258!4.94e-08!17;UBERON:0002298!6.64e-08!6;UBERON:0000025!1.21e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.32e-07,73;UBERON:0001016,3.77e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05235218932625,21.7489320907127,9.13820525649132,1.67983705950435,5.75010257459886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.89080254192331,13.831858991576,0,0,0,1.14260393761521,0.662605622854841,0,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.45839474333043,0.294628585473668,0.569486723196412,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,0,0,0,0,0.167506257441816,0.476087281772027,0.585400943573396,0.157635144106191,0.44292937929755,0.318909537314974,0.655453258862952,0.690739927463582,1.15719246865209,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.824140228955577,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.309873682371932,0,0,0.233931608445408,0,0,0,0|short_description=p@chr8:93340930..93340944,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=205 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:93340930..93340944,- | |||
|id=chr8:93340930..93340944,- | |||
|ontology_enrichment_celltype=CL:0002453!5.30e-10!8;CL:0000333!1.19e-07!10;CL:0000095!1.19e-07!10;CL:0000243!1.19e-07!10;CL:0000123!1.19e-07!10;CL:0000125!1.19e-07!10;CL:0000030!1.19e-07!10;CL:0000339!1.19e-07!10;CL:0000128!3.69e-07!6;CL:0000126!3.69e-07!6;CL:0000127!3.69e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,5.02e-54,8;CL:0000333,3.14e-43,10;CL:0000095,3.14e-43,10;CL:0000243,3.14e-43,10;CL:0000123,3.14e-43,10;CL:0000125,3.14e-43,10;CL:0000030,3.14e-43,10;CL:0000339,3.14e-43,10;CL:0000128,5.82e-37,6;CL:0000126,5.82e-37,6;CL:0000127,5.82e-37,6;CL:0002605,3.79e-19,2;CL:0002604,3.79e-19,2;CL:0000878,5.72e-19,2;CL:0000129,5.72e-19,2;CL:0002319,8.13e-13,43;CL:0000221,1.62e-12,44;CL:0000133,1.62e-12,44;CL:0002194,5.65e-10,4;CL:0000766,5.65e-10,4;CL:0000234,5.65e-10,4;CL:0000576,5.65e-10,4;CL:0000235,5.65e-10,4;CL:0000864,5.65e-10,4;CL:0002009,5.65e-10,4;CL:0000040,5.65e-10,4;CL:0000559,5.65e-10,4;CL:0000219,8.02e-08,54;CL:0002321,1.07e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.34e-11!73;UBERON:0005743!4.34e-11!73;UBERON:0000073!1.49e-10!75;UBERON:0001016!1.49e-10!75;UBERON:0001049!7.62e-10!52;UBERON:0005068!7.62e-10!52;UBERON:0006241!7.62e-10!52;UBERON:0007135!7.62e-10!52;UBERON:0000955!5.10e-09!50;UBERON:0006238!5.10e-09!50;UBERON:0002048!1.41e-08!14;UBERON:0000117!1.41e-08!14;UBERON:0000171!1.41e-08!14;UBERON:0000170!1.41e-08!14;UBERON:0005597!1.41e-08!14;UBERON:0000118!1.41e-08!14;UBERON:0002616!2.63e-08!49;UBERON:0003076!3.06e-08!12;UBERON:0003057!3.06e-08!12;UBERON:0005178!4.94e-08!17;UBERON:0005181!4.94e-08!17;UBERON:0002224!4.94e-08!17;UBERON:0000915!4.94e-08!17;UBERON:0008947!4.94e-08!17;UBERON:0003258!4.94e-08!17;UBERON:0002298!6.64e-08!6;UBERON:0000025!1.21e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.32e-07,73;UBERON:0001016,3.77e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05235218932625,21.7489320907127,9.13820525649132,1.67983705950435,5.75010257459886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.89080254192331,13.831858991576,0,0,0,1.14260393761521,0.662605622854841,0,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.45839474333043,0.294628585473668,0.569486723196412,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,0,0,0,0,0.167506257441816,0.476087281772027,0.585400943573396,0.157635144106191,0.44292937929755,0.318909537314974,0.655453258862952,0.690739927463582,1.15719246865209,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.824140228955577,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.309873682371932,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr8:93340930..93340944,- | |||
}} |
Revision as of 16:25, 14 September 2013
Short description: | p@chr8:93340930..93340944, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:93340930..93340944, - |
Coexpression cluster: | MCL_coexpression_mm9:205 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 5.02e-54 | 8 |
migratory neural crest cell | 3.14e-43 | 10 |
neuron associated cell | 3.14e-43 | 10 |
glial cell (sensu Vertebrata) | 3.14e-43 | 10 |
neuron associated cell (sensu Vertebrata) | 3.14e-43 | 10 |
glial cell | 3.14e-43 | 10 |
glioblast | 3.14e-43 | 10 |
glioblast (sensu Vertebrata) | 3.14e-43 | 10 |
oligodendrocyte | 5.82e-37 | 6 |
macroglial cell | 5.82e-37 | 6 |
astrocyte | 5.82e-37 | 6 |
astrocyte of the cerebral cortex | 3.79e-19 | 2 |
astrocyte of the hippocampus | 3.79e-19 | 2 |
central nervous system macrophage | 5.72e-19 | 2 |
microglial cell | 5.72e-19 | 2 |
neural cell | 8.13e-13 | 43 |
ectodermal cell | 1.62e-12 | 44 |
neurectodermal cell | 1.62e-12 | 44 |
monopoietic cell | 5.65e-10 | 4 |
myeloid leukocyte | 5.65e-10 | 4 |
phagocyte | 5.65e-10 | 4 |
monocyte | 5.65e-10 | 4 |
macrophage | 5.65e-10 | 4 |
tissue-resident macrophage | 5.65e-10 | 4 |
macrophage dendritic cell progenitor | 5.65e-10 | 4 |
monoblast | 5.65e-10 | 4 |
promonocyte | 5.65e-10 | 4 |
motile cell | 8.02e-08 | 54 |
embryonic cell | 1.07e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.32e-07 | 73 |
nervous system | 3.77e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.