FFCP PHASE1:Mm9::chr9:57613347..57613362,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=102414|HGNC=|UniProt=O35492|association_with_transcript=304bp_to_ENSMUST00000065330,NM_007713,uc009pvr.1,uc009pvs.1_5end|description=CAGE_peak_6_at_Clk3_5end|id=chr9:57613347..57613362,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!4.03e-17!86;UBERON:0000153!6.82e-16!94;UBERON:0002020!3.35e-13!34;UBERON:0001049!1.13e-12!52;UBERON:0005068!1.13e-12!52;UBERON:0006241!1.13e-12!52;UBERON:0007135!1.13e-12!52;UBERON:0000955!1.80e-12!50;UBERON:0006238!1.80e-12!50;UBERON:0001017!2.06e-12!73;UBERON:0005743!2.06e-12!73;UBERON:0002616!5.92e-12!49;UBERON:0000073!7.03e-12!75;UBERON:0001016!7.03e-12!75;UBERON:0002791!7.63e-12!29;UBERON:0003528!7.63e-12!29;UBERON:0001893!7.63e-12!29;UBERON:0000064!5.19e-11!99;UBERON:0000033!1.39e-10!63;UBERON:0003080!2.89e-10!40;UBERON:0002780!9.26e-10!39;UBERON:0001890!9.26e-10!39;UBERON:0006240!9.26e-10!39;UBERON:0002346!7.84e-09!71;UBERON:0003075!7.84e-09!71;UBERON:0007284!7.84e-09!71;UBERON:0003056!9.34e-09!49;UBERON:0000956!9.59e-09!21;UBERON:0001869!9.59e-09!21;UBERON:0000203!9.59e-09!21;UBERON:0004121!4.00e-08!102;UBERON:0000924!4.00e-08!102;UBERON:0006601!4.00e-08!102;UBERON:0000477!1.37e-07!154;UBERON:0002619!1.99e-07!17;UBERON:0000072!2.08e-07!27;UBERON:0006562!7.47e-07!24;UBERON:0001557!7.47e-07!24;UBERON:0001042!7.47e-07!24;UBERON:0008814!7.47e-07!24;UBERON:0009145!7.47e-07!24;UBERON:0002370!8.01e-07!23;UBERON:0000974!8.01e-07!23;UBERON:0004807!8.01e-07!23;UBERON:0005058!8.01e-07!23;UBERON:0003351!8.01e-07!23;UBERON:0009113!8.01e-07!23;UBERON:0003295!8.01e-07!23;UBERON:0009722!8.01e-07!23;UBERON:0005562!8.01e-07!23;UBERON:0007690!8.01e-07!23;UBERON:0000063!8.29e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.09e-13,23;UBERON:0000974,1.09e-13,23;UBERON:0004807,1.09e-13,23;UBERON:0005058,1.09e-13,23;UBERON:0003351,1.09e-13,23;UBERON:0009113,1.09e-13,23;UBERON:0003295,1.09e-13,23;UBERON:0009722,1.09e-13,23;UBERON:0005562,1.09e-13,23;UBERON:0007690,1.09e-13,23;UBERON:0006562,5.40e-13,24;UBERON:0003408,5.40e-13,24;UBERON:0001557,5.40e-13,24;UBERON:0001042,5.40e-13,24;UBERON:0008814,5.40e-13,24;UBERON:0009145,5.40e-13,24;UBERON:0003080,4.23e-12,40;UBERON:0003528,7.16e-12,29;UBERON:0002791,7.16e-12,29;UBERON:0001893,7.16e-12,29;UBERON:0000072,3.22e-11,27;UBERON:0000955,4.87e-11,47;UBERON:0006238,4.87e-11,47;UBERON:0002780,5.99e-11,39;UBERON:0001890,5.99e-11,39;UBERON:0006240,5.99e-11,39;UBERON:0001017,2.04e-10,73;UBERON:0004177,3.06e-10,29;UBERON:0005057,3.06e-10,29;UBERON:0002616,5.36e-10,46;UBERON:0001016,5.40e-10,75;UBERON:0002020,1.18e-09,34;UBERON:0002619,2.08e-09,17;UBERON:0000073,3.57e-09,54;UBERON:0003056,3.83e-09,49;UBERON:0000956,4.65e-09,21;UBERON:0001869,4.65e-09,21;UBERON:0000203,4.65e-09,21;UBERON:0001049,2.17e-08,52;UBERON:0005068,2.17e-08,52;UBERON:0006241,2.17e-08,52;UBERON:0007135,2.17e-08,52;UBERON:0002021,3.80e-08,10;UBERON:0000411,3.80e-08,10;UBERON:0001950,3.80e-08,10;UBERON:0000077,5.45e-08,35;UBERON:0011216,9.07e-08,194;UBERON:0007811,1.09e-07,36;UBERON:0002346,5.42e-07,64;UBERON:0003075,5.42e-07,64;UBERON:0007284,5.42e-07,64;UBERON:0004121,8.75e-07,95;UBERON:0000924,8.75e-07,95;UBERON:0006601,8.75e-07,95|phase1_expression=0.480446541314382,0.697950815278722,0,0.30246421130683,0.500895729946347,0.33575854382378,0.700837921786577,0.903863264091034,1.12630977721333,1.17032263160997,0.171217968225505,0.0797721589953364,1.71200729931206,0.874204024189974,0,0.202475267389826,0,0,0.274228867211478,0,0.510259740906419,0.198581902401771,0,0.95995453676044,0,0,0,0.430942465371778,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0.588231488031014,0,0,0,0.101376931219515,0.183546752161682,0.782391344348039,0,1.09843091367236,0.58328969722285,0.55994568650145,1.43752564364972,0.335565212115473,2.90144856804538,1.00828139742739,0.514518872071894,0.573066879877513,0.515672092277442,0.404632921719196,1.05798195854407,0,0.677689064138264,0,0.449949858640699,0,0.7104801149461,0.299600110518405,1.15265491596466,0.622137673850866,0.675029691658453,0.630974884054146,0.856952953211411,0.883474163806454,0.489963196859816,0.862609239164127,0,2.20231761998777,0.383062014255563,0.768032666281217,0.527545150920775,0.731901148819277,1.04182674111352,1.11673199600552,0.56276261003168,1.06958773443767,0.589257170947335,0.427115042397309,0.931997229126503,0.227178579999552,0.151143120213571,0.289864488701678,0,0.679971333707751,0,0,0.448026887097336,0.140444420131752,0.511290967734173,0,0,0.422530259330042,1.28326477414318,0,0,0.865964164044856,0.506719730950197,0.505524445014783,0.5709193985953,0,0.445326417194474,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0.970601099684455,0.441683036920787,0,0,0.585561594023094,0.628340120440365,0,0.359445373517761,0.599902730993408,0.508280908292259,1.3481157546434,0.915001205637253,2.01046963380583,1.91206752211504,3.3243009452943,0.6233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| ||
|EntrezGene=102414 | |||
|HGNC= | |||
|UniProt=O35492 | |||
|association_with_transcript=304bp_to_ENSMUST00000065330,NM_007713,uc009pvr.1,uc009pvs.1_5end | |||
|description=CAGE_peak_6_at_Clk3_5end | |||
|id=chr9:57613347..57613362,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!4.03e-17!86;UBERON:0000153!6.82e-16!94;UBERON:0002020!3.35e-13!34;UBERON:0001049!1.13e-12!52;UBERON:0005068!1.13e-12!52;UBERON:0006241!1.13e-12!52;UBERON:0007135!1.13e-12!52;UBERON:0000955!1.80e-12!50;UBERON:0006238!1.80e-12!50;UBERON:0001017!2.06e-12!73;UBERON:0005743!2.06e-12!73;UBERON:0002616!5.92e-12!49;UBERON:0000073!7.03e-12!75;UBERON:0001016!7.03e-12!75;UBERON:0002791!7.63e-12!29;UBERON:0003528!7.63e-12!29;UBERON:0001893!7.63e-12!29;UBERON:0000064!5.19e-11!99;UBERON:0000033!1.39e-10!63;UBERON:0003080!2.89e-10!40;UBERON:0002780!9.26e-10!39;UBERON:0001890!9.26e-10!39;UBERON:0006240!9.26e-10!39;UBERON:0002346!7.84e-09!71;UBERON:0003075!7.84e-09!71;UBERON:0007284!7.84e-09!71;UBERON:0003056!9.34e-09!49;UBERON:0000956!9.59e-09!21;UBERON:0001869!9.59e-09!21;UBERON:0000203!9.59e-09!21;UBERON:0004121!4.00e-08!102;UBERON:0000924!4.00e-08!102;UBERON:0006601!4.00e-08!102;UBERON:0000477!1.37e-07!154;UBERON:0002619!1.99e-07!17;UBERON:0000072!2.08e-07!27;UBERON:0006562!7.47e-07!24;UBERON:0001557!7.47e-07!24;UBERON:0001042!7.47e-07!24;UBERON:0008814!7.47e-07!24;UBERON:0009145!7.47e-07!24;UBERON:0002370!8.01e-07!23;UBERON:0000974!8.01e-07!23;UBERON:0004807!8.01e-07!23;UBERON:0005058!8.01e-07!23;UBERON:0003351!8.01e-07!23;UBERON:0009113!8.01e-07!23;UBERON:0003295!8.01e-07!23;UBERON:0009722!8.01e-07!23;UBERON:0005562!8.01e-07!23;UBERON:0007690!8.01e-07!23;UBERON:0000063!8.29e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.09e-13,23;UBERON:0000974,1.09e-13,23;UBERON:0004807,1.09e-13,23;UBERON:0005058,1.09e-13,23;UBERON:0003351,1.09e-13,23;UBERON:0009113,1.09e-13,23;UBERON:0003295,1.09e-13,23;UBERON:0009722,1.09e-13,23;UBERON:0005562,1.09e-13,23;UBERON:0007690,1.09e-13,23;UBERON:0006562,5.40e-13,24;UBERON:0003408,5.40e-13,24;UBERON:0001557,5.40e-13,24;UBERON:0001042,5.40e-13,24;UBERON:0008814,5.40e-13,24;UBERON:0009145,5.40e-13,24;UBERON:0003080,4.23e-12,40;UBERON:0003528,7.16e-12,29;UBERON:0002791,7.16e-12,29;UBERON:0001893,7.16e-12,29;UBERON:0000072,3.22e-11,27;UBERON:0000955,4.87e-11,47;UBERON:0006238,4.87e-11,47;UBERON:0002780,5.99e-11,39;UBERON:0001890,5.99e-11,39;UBERON:0006240,5.99e-11,39;UBERON:0001017,2.04e-10,73;UBERON:0004177,3.06e-10,29;UBERON:0005057,3.06e-10,29;UBERON:0002616,5.36e-10,46;UBERON:0001016,5.40e-10,75;UBERON:0002020,1.18e-09,34;UBERON:0002619,2.08e-09,17;UBERON:0000073,3.57e-09,54;UBERON:0003056,3.83e-09,49;UBERON:0000956,4.65e-09,21;UBERON:0001869,4.65e-09,21;UBERON:0000203,4.65e-09,21;UBERON:0001049,2.17e-08,52;UBERON:0005068,2.17e-08,52;UBERON:0006241,2.17e-08,52;UBERON:0007135,2.17e-08,52;UBERON:0002021,3.80e-08,10;UBERON:0000411,3.80e-08,10;UBERON:0001950,3.80e-08,10;UBERON:0000077,5.45e-08,35;UBERON:0011216,9.07e-08,194;UBERON:0007811,1.09e-07,36;UBERON:0002346,5.42e-07,64;UBERON:0003075,5.42e-07,64;UBERON:0007284,5.42e-07,64;UBERON:0004121,8.75e-07,95;UBERON:0000924,8.75e-07,95;UBERON:0006601,8.75e-07,95 | |||
|phase1_expression=0.480446541314382,0.697950815278722,0,0.30246421130683,0.500895729946347,0.33575854382378,0.700837921786577,0.903863264091034,1.12630977721333,1.17032263160997,0.171217968225505,0.0797721589953364,1.71200729931206,0.874204024189974,0,0.202475267389826,0,0,0.274228867211478,0,0.510259740906419,0.198581902401771,0,0.95995453676044,0,0,0,0.430942465371778,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0.588231488031014,0,0,0,0.101376931219515,0.183546752161682,0.782391344348039,0,1.09843091367236,0.58328969722285,0.55994568650145,1.43752564364972,0.335565212115473,2.90144856804538,1.00828139742739,0.514518872071894,0.573066879877513,0.515672092277442,0.404632921719196,1.05798195854407,0,0.677689064138264,0,0.449949858640699,0,0.7104801149461,0.299600110518405,1.15265491596466,0.622137673850866,0.675029691658453,0.630974884054146,0.856952953211411,0.883474163806454,0.489963196859816,0.862609239164127,0,2.20231761998777,0.383062014255563,0.768032666281217,0.527545150920775,0.731901148819277,1.04182674111352,1.11673199600552,0.56276261003168,1.06958773443767,0.589257170947335,0.427115042397309,0.931997229126503,0.227178579999552,0.151143120213571,0.289864488701678,0,0.679971333707751,0,0,0.448026887097336,0.140444420131752,0.511290967734173,0,0,0.422530259330042,1.28326477414318,0,0,0.865964164044856,0.506719730950197,0.505524445014783,0.5709193985953,0,0.445326417194474,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0.970601099684455,0.441683036920787,0,0,0.585561594023094,0.628340120440365,0,0.359445373517761,0.599902730993408,0.508280908292259,1.3481157546434,0.915001205637253,2.01046963380583,1.91206752211504,3.3243009452943,0.62336413367868,1.78465389374533,0.203678727700633,0.124406970610093,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0.180062129805349,0.60281927134286,0.476255494059295,0,0.468508622798644,0.258703370739016,0.215567992932842,0.378212160335639,0.351902248327898,0.43839146485515,0.278047249225598,0,0.61734640922383,0.398068533636986,0,0.51469581422943,0.284163499395593,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0,0.350296027101508,0.329119699826961,0.32833492815819,0.324275238183423,0.292399974850665,0,0.402619256281115,1.05144974282064,2.46971069710283,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0,0.667134131534611,0.570676878337677,0.474529061544512,0.494096864172033,0.502670417600539,0,0.58489226135736,0,0,0.398282546508734,0,0.228497025219458,0,0,0,0.420814919341911,0.442655759869801,0.442830443938806,0,0.370191491765402,0.889357881261447,0.166845105716094,0,0.224862112384854,0.608580364165509,0.482354319504834,0,0,0.324270453550071,0,1.43768206527355,0,0.312037673114561,0,0,0.482443521363367,0.184753190166605,0,0.162964976442026,0,0.234690248288502,0.502518772325447,0,0.585400943573396,0,0.8858587585951,0.318909537314974,0.655453258862952,0.518054945597687,0.723245292907558,0,0,0,0.551873492609465,0.80275294993896,0.703270119553219,0.491804836130026,0.757412781613119,0,1.17131623288992,0,0.238968797952552,0.668396022247182,0,0,0,0.395287777946524,1.28528526568723,0,0.534196811001766,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0.363533729477506,0,0,0,1.03135543248187,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0.329098041204242,2.13125464380219,0.23467170806371,0.21183207086382,0.220528398054962,0,0.322928853391811,0.301564624640779,0.238744688006273,0.328281799490123,0.291480836629851,0.556275906031529,0.170870880797853,0,0.185194527369712,0,0,0.686334519619568,0.509935289981566,2.09927178485487,0.552799895217695,0,0.316335993581135,0.609958401380546,0.324016022465404,0.209088296014469,0.436725127492355,0.269728692769641,0.330613822901344,0.26175594198403,0,0,0,0.598066184175915,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0.39061315453185,0.314578033277133,0,0,2.21207784439725,0.202725215290164,0.513554785824136,0.909445760844565,0.716106782669926,0.993406773906324,2.52410443991935,1.62458479892035,1.9183625490148,2.13379058634,1.20991422164209,1.55932609183604,1.6356013078856,3.3894301632655,0.453460767230423,0,0,0.167884616364078,0.579568782096571,0,0.183151624267265,0.214368379079066,0,1.6942555278512,1.84130094602871,2.86447756719698,3.26521046453006,0.685082519770642,0.755393897389701,0.675022500231806,2.2516060161211,0.906284817968409,2.07104124700728,0.103787347584177,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.320125762024346,0.459483751644906,0.952587382566147,0.231768651889711,0.964546102318525,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.338458431566706,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.394017929502254,0.818462086339379,0.154936841185966,0.385813221962283,0.999242311751784,0.233931608445408,0.8594842161931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| |||
|short_description=p6@Clk3 | |||
}} |
Revision as of 18:20, 14 September 2013
Short description: | p6@Clk3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Clk3_5end |
Coexpression cluster: | NA |
Association with transcript: | 304bp_to_ENSMUST00000065330, NM_007713, uc009pvr.1, uc009pvs.1_5end |
EntrezGene: | Clk3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.