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FFCP PHASE1:Mm9::chr9:7176970..7176997,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=110350|HGNC=|UniProt=D3Z025|association_with_transcript=-5bp_to_ENSMUST00000139115_5end|description=CAGE_peak_3_at_Dync2h1_5end|id=chr9:7176970..7176997,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.46e-10!63;UBERON:0003056!1.14e-08!49;UBERON:0002346!1.25e-08!71;UBERON:0003075!1.25e-08!71;UBERON:0007284!1.25e-08!71;UBERON:0000991!3.09e-08!18;UBERON:0005564!3.09e-08!18;UBERON:0004176!9.48e-08!17;UBERON:0009196!9.48e-08!17;UBERON:0009117!9.48e-08!17;UBERON:0003135!5.03e-07!15;UBERON:0003886!5.26e-07!38;UBERON:0002553!5.64e-07!39;UBERON:0000468!6.95e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000991,9.40e-09,18;UBERON:0005564,9.40e-09,18;UBERON:0004176,3.14e-08,17;UBERON:0009196,3.14e-08,17;UBERON:0009117,3.14e-08,17;UBERON:0003056,1.53e-07,49;UBERON:0003135,1.89e-07,15;UBERON:0002113,4.15e-07,14;UBERON:0003918,4.15e-07,14;UBERON:0011143,4.15e-07,14;UBERON:0005095,4.15e-07,14;UBERON:0007687,4.15e-07,14;UBERON:0000473,4.90e-07,14;UBERON:0003101,5.64e-07,16;UBERON:0000079,5.64e-07,16;UBERON:0003886,6.45e-07,38;UBERON:0002553,6.85e-07,39;UBERON:0002346,8.01e-07,64;UBERON:0003075,8.01e-07,64;UBERON:0007284,8.01e-07,64|phase1_expression=6.88640042550614,0,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0.387369970324729,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0,0,0.202475267389826,0,0,0.137114433605739,0,3.656861476496,0,0,0.159992422793407,0.45881856213434,0,0,0.430942465371778,0.190023419456374,0,0.886922042621219,1.27006134691926,0.61506478758457,0,0.866554859253824,0.332469290716985,2.04169356262369,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0,0.436050312760893,0.659058548203415,0.777719596297134,0.55994568650145,1.43752564364972,0,0,0.336093799142464,0.514518872071894,1.43266719969378,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,1.65903379693564,0.675029691658453,1.05162480675691,0.285650984403804,0.883474163806454,0.857435594504678,0.575072826109418,0.919218786610021,5.50579404996943,1.27687338085188,2.4577045320999,0.923204014111357,1.55528994124096,3.12548022334056,1.67509799400829,1.12552522006336,4.12555268997387,2.65165726926301,2.70506193518296,1.3047961207771,0.227178579999552,0.226714680320357,2.6087803983151,0.860423876981386,0,0,1.29955283489534,2.24013443548668,0.561777680527007,0,0,0,2.11265129665021,0,0,0,0,0,0,2.05530983494308,0.776813650941515,2.82040064223167,0.867426633830679,1.21786191324856,3.22861696158482,2.56228488939458,4.70354828542819,1.88499886994513,0,0.722996784599558,0.884610551949874,2.10296904931632,0.441683036920787,1.45462575940567,0,3.51336956413857,3.77004072264219,1.02182822083437,1.1981512450592,1.19980546198682,0.508280908292259,4.34392854273986,2.28750301409313,2.01046963380583,4.69325664519146,3.83573185995496,4.1557608911912,3.56930778749067,4.07357455401265,1.8661045591514,4.0435641349388,1.26265113531884,7.67710613479952,8.04657365517155,7.56260945182467,6.17889753126432,8.77670839052129,7.04625461566674,5.15359485078509,4.39795730256327,2.37124792226126,5.48407632486676,4.75068035242662,2.84954452155847,3.89266148915837,3.48252166522167,3.90986059175093,4.97585667046233,0,0,0,1.03562886267751,0.938104239924385,0.900310307305074,2.13070262026689,0.983821158737019,1.23413690309903,0.232533944750408,0.536546802799238,0.700592054203017,1.15191894939436,1.14917224855367,0.243206428637567,0.877199924551994,0.878200461164203,0.402619256281115,5.67782861123144,2.98423375899925,0,0,3.62590025909898,4.18026009348789,3.47942145569652,2.62188582010345,1.55664630691409,1.71203063501303,0.474529061544512,0.494096864172033,2.5133520880027,0.795825888164603,0.974820435595601,0,0.648414149624083,0.597423819763102,1.70701110857774,6.05517116831563,4.50830942692322,5.7022371796688,6.0125271021964,5.19005067188357,3.85742876457969,4.42830443938806,5.96595165797224,6.66344685177723,3.26097889795864,0.333690211432188,0.393117990226406,0.449724224769707,0.811440485554012,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,0.549122826376163,0,0.744281895337007,0.312037673114561,1.26289438973556,0.358794827043824,2.41221760681684,2.58654466233247,2.84237117655727,2.77040459951444,3.22515662972857,2.58159273117352,2.68010011906905,3.80869825417622,2.34160377429359,1.57635144106191,2.43611158613652,2.87018583583477,1.47476983244164,1.89953480052485,1.88043776155965,0,0,0.491764273019036,2.20749397043786,2.56880943980467,4.33683240391152,0,0.504941854408746,0.631016438832513,1.17131623288992,2.15423397732799,0.238968797952552,1.11399337041197,0.566153061577665,1.61924280669958,1.46127928955656,1.18586333383957,5.14114106274891,3.97432238583152,3.02711526234334,5.86393053672874,6.26886467295635,2.65490276679926,1.94224508923985,3.02323556964751,2.07465587731488,1.47650946440386,3.99665692327106,5.68542244970086,3.99887102425256,3.92147116223193,2.2122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|EntrezGene=110350
|HGNC=
|UniProt=D3Z025
|association_with_transcript=-5bp_to_ENSMUST00000139115_5end
|description=CAGE_peak_3_at_Dync2h1_5end
|id=chr9:7176970..7176997,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.46e-10!63;UBERON:0003056!1.14e-08!49;UBERON:0002346!1.25e-08!71;UBERON:0003075!1.25e-08!71;UBERON:0007284!1.25e-08!71;UBERON:0000991!3.09e-08!18;UBERON:0005564!3.09e-08!18;UBERON:0004176!9.48e-08!17;UBERON:0009196!9.48e-08!17;UBERON:0009117!9.48e-08!17;UBERON:0003135!5.03e-07!15;UBERON:0003886!5.26e-07!38;UBERON:0002553!5.64e-07!39;UBERON:0000468!6.95e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000991,9.40e-09,18;UBERON:0005564,9.40e-09,18;UBERON:0004176,3.14e-08,17;UBERON:0009196,3.14e-08,17;UBERON:0009117,3.14e-08,17;UBERON:0003056,1.53e-07,49;UBERON:0003135,1.89e-07,15;UBERON:0002113,4.15e-07,14;UBERON:0003918,4.15e-07,14;UBERON:0011143,4.15e-07,14;UBERON:0005095,4.15e-07,14;UBERON:0007687,4.15e-07,14;UBERON:0000473,4.90e-07,14;UBERON:0003101,5.64e-07,16;UBERON:0000079,5.64e-07,16;UBERON:0003886,6.45e-07,38;UBERON:0002553,6.85e-07,39;UBERON:0002346,8.01e-07,64;UBERON:0003075,8.01e-07,64;UBERON:0007284,8.01e-07,64
|phase1_expression=6.88640042550614,0,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0.387369970324729,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0,0,0.202475267389826,0,0,0.137114433605739,0,3.656861476496,0,0,0.159992422793407,0.45881856213434,0,0,0.430942465371778,0.190023419456374,0,0.886922042621219,1.27006134691926,0.61506478758457,0,0.866554859253824,0.332469290716985,2.04169356262369,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0,0.436050312760893,0.659058548203415,0.777719596297134,0.55994568650145,1.43752564364972,0,0,0.336093799142464,0.514518872071894,1.43266719969378,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,1.65903379693564,0.675029691658453,1.05162480675691,0.285650984403804,0.883474163806454,0.857435594504678,0.575072826109418,0.919218786610021,5.50579404996943,1.27687338085188,2.4577045320999,0.923204014111357,1.55528994124096,3.12548022334056,1.67509799400829,1.12552522006336,4.12555268997387,2.65165726926301,2.70506193518296,1.3047961207771,0.227178579999552,0.226714680320357,2.6087803983151,0.860423876981386,0,0,1.29955283489534,2.24013443548668,0.561777680527007,0,0,0,2.11265129665021,0,0,0,0,0,0,2.05530983494308,0.776813650941515,2.82040064223167,0.867426633830679,1.21786191324856,3.22861696158482,2.56228488939458,4.70354828542819,1.88499886994513,0,0.722996784599558,0.884610551949874,2.10296904931632,0.441683036920787,1.45462575940567,0,3.51336956413857,3.77004072264219,1.02182822083437,1.1981512450592,1.19980546198682,0.508280908292259,4.34392854273986,2.28750301409313,2.01046963380583,4.69325664519146,3.83573185995496,4.1557608911912,3.56930778749067,4.07357455401265,1.8661045591514,4.0435641349388,1.26265113531884,7.67710613479952,8.04657365517155,7.56260945182467,6.17889753126432,8.77670839052129,7.04625461566674,5.15359485078509,4.39795730256327,2.37124792226126,5.48407632486676,4.75068035242662,2.84954452155847,3.89266148915837,3.48252166522167,3.90986059175093,4.97585667046233,0,0,0,1.03562886267751,0.938104239924385,0.900310307305074,2.13070262026689,0.983821158737019,1.23413690309903,0.232533944750408,0.536546802799238,0.700592054203017,1.15191894939436,1.14917224855367,0.243206428637567,0.877199924551994,0.878200461164203,0.402619256281115,5.67782861123144,2.98423375899925,0,0,3.62590025909898,4.18026009348789,3.47942145569652,2.62188582010345,1.55664630691409,1.71203063501303,0.474529061544512,0.494096864172033,2.5133520880027,0.795825888164603,0.974820435595601,0,0.648414149624083,0.597423819763102,1.70701110857774,6.05517116831563,4.50830942692322,5.7022371796688,6.0125271021964,5.19005067188357,3.85742876457969,4.42830443938806,5.96595165797224,6.66344685177723,3.26097889795864,0.333690211432188,0.393117990226406,0.449724224769707,0.811440485554012,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,0.549122826376163,0,0.744281895337007,0.312037673114561,1.26289438973556,0.358794827043824,2.41221760681684,2.58654466233247,2.84237117655727,2.77040459951444,3.22515662972857,2.58159273117352,2.68010011906905,3.80869825417622,2.34160377429359,1.57635144106191,2.43611158613652,2.87018583583477,1.47476983244164,1.89953480052485,1.88043776155965,0,0,0.491764273019036,2.20749397043786,2.56880943980467,4.33683240391152,0,0.504941854408746,0.631016438832513,1.17131623288992,2.15423397732799,0.238968797952552,1.11399337041197,0.566153061577665,1.61924280669958,1.46127928955656,1.18586333383957,5.14114106274891,3.97432238583152,3.02711526234334,5.86393053672874,6.26886467295635,2.65490276679926,1.94224508923985,3.02323556964751,2.07465587731488,1.47650946440386,3.99665692327106,5.68542244970086,3.99887102425256,3.92147116223193,2.21225730555071,3.16255825724996,2.06271086496374,14.9793426531667,7.38250485528372,1.4229455216103,5.78709994585299,8.33499098118686,8.20496560969525,8.72109809191241,2.13125464380219,0.704015124191131,0,1.10264199027481,1.15420377059036,0.322928853391811,1.14594557363496,0.954978752025092,0.656563598980245,0.874442509889552,2.22510362412612,0.512612642393558,1.44470807574256,0.555583582109135,0.565105371014073,0.820165366326151,0,1.5298058699447,2.37917468950219,1.38199973804424,0.954670618015114,2.37251995185852,3.04979200690273,2.37611749807963,3.3454127362315,1.74690050996942,1.34864346384821,2.47960367176008,0.26175594198403,0.777689839750757,1.86401793926078,9.01908701894705,2.24274819065968,2.31641886639937,4.86127970860119,3.7456348808542,4.73077151374179,5.51579021635044,5.07797100891405,5.24296722128554,9.66336483304024,9.79302021276743,0.632022241256357,1.41907650703115,1.33524244314275,0.77952493786677,1.07416017400489,0.39736270956253,0.600977247599844,1.03382669022204,0.403865799792591,0.838274873204998,0.403304740547362,0.487289403698762,0.0962118416403295,0.701261413089414,2.26730383615211,0,0.0897138566094757,0.167884616364078,0.579568782096571,1.87682475451182,1.46521299413812,0.428736758158132,4.01257683228291,1.6942555278512,0.920650473014354,2.864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|short_description=p3@Dync2h1
}}

Revision as of 18:40, 14 September 2013

Short description:p3@Dync2h1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Dync2h1_5end
Coexpression cluster:NA
Association with transcript: -5bp_to_ENSMUST00000139115_5end
EntrezGene:Dync2h1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Dync2h1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C14.70
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A44.34
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.07
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C67.68
eyeball, embryo E14.CNhs10521.399-16E28.05
eyeball, embryo E15.CNhs10593.426-16C97.56
eyeball, embryo E17.CNhs11023.1261-18D46.18
eyeball, neonate N00.CNhs11207.633-15C68.78
eyeball, neonate N01.CNhs11140.1532-43E77.05
eyeball, neonate N02.CNhs11205.1551-44G85.15
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H25.48
forelimb, embryo E13.CNhs10589.384-1E24.75
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B53.91
gonad, embryo E13.CNhs11044.1564-45I64.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D83.48
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F86.06
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I25.70
kidney, embryo E18.CNhs11001.1288-20C76.01
kidney, neonate N00.CNhs11214.646-21G75.19
kidney, neonate N10.CNhs11206.758-6D53.86
kidney, neonate N20.CNhs11113.832-19I14.43
kidney, neonate N25.CNhs11122.1353-25F35.97
kidney, neonate N30.CNhs11203.1385-42H16.66
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I73.97
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I45.86
oviduct, adult pregnant day01.CNhs10500.988-6G66.27
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G814.98
pituitary gland, embryo E12.CNhs11018.346-16E67.38
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B98.33
pituitary gland, embryo E16.CNhs11036.449-43F68.20
pituitary gland, embryo E17.CNhs11039.1265-44F58.72
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D42.38
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A92.48
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G54.86
testis, embryo E17.CNhs11029.486-18I53.75
testis, embryo E18.CNhs11027.503-18G54.73
testis, neonate N00.CNhs11189.1300-22B75.52
testis, neonate N07.CNhs11222.726-26I45.08
testis, neonate N10.CNhs11204.763-44D95.24
testis, neonate N20.CNhs11110.839-18H39.66
testis, neonate N30.CNhs11130.1391-42E29.79
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I83.01
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gonad9.40e-0918
gonad primordium9.40e-0918
external genitalia3.14e-0817
indifferent external genitalia3.14e-0817
indifferent gonad3.14e-0817
pre-chordal neural plate1.53e-0749
male reproductive organ1.89e-0715
kidney4.15e-0714
kidney mesenchyme4.15e-0714
upper urinary tract4.15e-0714
kidney rudiment4.15e-0714
kidney field4.15e-0714
testis4.90e-0714
male organism5.64e-0716
male reproductive system5.64e-0716
body cavity precursor6.45e-0738
anatomical cavity6.85e-0739
neurectoderm8.01e-0764
neural plate8.01e-0764
presumptive neural plate8.01e-0764







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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