FFCP PHASE1:Hg19::chr1:51434707..51434717,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1031 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1789 | |||
|TSSclassifier=strong | |||
|UniProt=P42773,Q6ICV4 | |||
|association_with_transcript=340bp_to_ENST00000396148,NM_001262_5end | |||
|description=CAGE_peak_11_at_CDKN2C_5end | |||
|id=chr1:51434707..51434717,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000817;2.54e-09;1!CL:0000785;2.54e-09;1!CL:0000819;2.54e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,1.36e-11,3;CL:0002032,1.02e-09,161;CL:0000837,1.02e-09,161;CL:0000819,1.12e-09,1;CL:0000037,3.41e-09,168;CL:0000988,1.39e-08,177;CL:0000763,5.85e-07,108;CL:0000049,5.85e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.54e-09;1!UBERON:0005425;2.54e-09;1 | |||
|ontology_enrichment_disease=DOID:2531!1.56e-15!51;DOID:0060083!1.56e-15!51;DOID:162!6.83e-13!235;DOID:14566!5.76e-12!239;DOID:1240!1.20e-11!39;DOID:8692!3.12e-10!31;DOID:0050686!6.43e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.99e-28;31!DOID:2531;4.09e-22;51!DOID:0060083;4.09e-22;51!DOID:1240;7.87e-21;39!DOID:0060073;2.54e-09;1!DOID:8675;2.54e-09;1!DOID:9119;2.54e-09;1!DOID:8552;2.54e-09;1!DOID:0060058;7.49e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.23e-37,51;DOID:0060083,4.23e-37,51;DOID:1240,5.79e-32,39;DOID:8692,5.34e-29,31;DOID:0050686,6.54e-12,137;DOID:0060073,1.12e-09,1;DOID:8675,1.12e-09,1;DOID:9119,1.21e-09,1;DOID:8552,1.84e-09,1;DOID:0060058,5.46e-08,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;2.54e-09;1!UBERON:0000941;2.54e-09;1!UBERON:0001785;2.54e-09;1!UBERON:0002464;2.54e-09;1!UBERON:0004904;2.54e-09;1!UBERON:0001021;2.54e-09;1!UBERON:0001567;2.54e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,1.32e-09,1;UBERON:0001567,1.32e-09,1;UBERON:0008801,1.32e-09,1;UBERON:0000941,2.16e-09,1;UBERON:0001785,2.16e-09,1;UBERON:0002464,2.16e-09,1;UBERON:0004904,2.16e-09,1;UBERON:0001021,2.16e-09,1;UBERON:0003902,2.16e-09,1;UBERON:0005425,2.16e-09,1 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.273748850145768,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0.786728553697808,0,0,0,0,0,1.47187681102573,0.568676929949686,0,0,0,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0.336985893439485,0.300353785683013,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.493313713811028,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0.144846518960824,0.795285947051099,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0.476981248610684,0.571994910780128,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0.490385709340376,0.151357427644931,0,0,0,0,0,0,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0.292311015483596,0,0,0.161646056818812,0,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0.721879481669586,0.709840800239063,0.674338760312407,0.964044119533928,0.220587945464788,0.217879444092406,0.237270619111097,0.808987848960987,0.784885860501384,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445893486866185,0,0,0,0,0,0,0,0.352193736052904,0.621984346622316,0.864719720501769,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0.784596007954691,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0,0,0.54941678891006,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715624433709956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0,1.00988449083511,0.497992903438899,0,0.199579371432817,0,0.846694330895531,1.29848776109822,0.842391534340376,0.684704037099577,0.156679895773023,0,0.338583555603207,0.802940375518498,1.21079824314629,1.27753871307098,1.03051603426729,1.53620382154229,1.11838053946208,1.50164227540718,0,0.278406173895242,0,1.08182271390393,1.6653598399891,0,0,0.146508179271894,0.36408156524854,0.222886768554957,0,0,0,0,0,0.140669416410513,0.333926115068718,0,0.211125408127993,0.19924798825107,0.276283915531148,0.251932747854276,0.409074730008619,0,0,0.0898683511473268,0,1.02314474045374,0.0986434056369336,4.7896618469388,0,0,0.278304294485554,0,0.260427761085233,0.0874599999961957,0,0,0,0.236387681767936,0.689486746482929,0,0.868124974666461,0,0.241192877250816,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0.139423744278603,0,0,0,0,0,0,0,0,3.06579894587209,0,1.49590513710141,0.225595660617181,0,0,0,0.476809736941136,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,1.82454789215666,0,0,0,0,0.30607276163049,0.31593289814244,0.300646838828985,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0.34823682632161,0,0.343972064943233,0.0967563312890851,0.146178634172371,0.656923656425674,0.0969890164884194,0,0,0.274083849293502,0,0.0633107959558787,0.586654148204409,0.0801588202515337,0.213452994739353,0.39961921916426,0,0.229073192331831,0.343189995723929,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0,0.295282444544246,0.169346664131569,0,0,0,0,0,0.449947783103001,0.77380195455795,0.0607495566580247,0,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.574647645245373,0,0.226624183040251,0,0,0.258565912723101,0.13223260174269,0.171086837884329,0,0.213574825135389,0,0,0,1.18566979138767,3.53198535304598,0,1.08803560673895,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.110929051536852,0.124192805882767,0,0.249960815924213,0.151649117541648,0,0,0.936669811613763,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0.428883182749851,0,0.453411851024545,0.231522474323834,0.244736704506468,0.358177682162975,0,0.219284049578707,0,0.192914038270915,0,0,0.345430341731199,0,0.414775308455192,0,0,0.1635653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| |||
|short_description=p11@CDKN2C | |||
}} |
Revision as of 18:29, 10 January 2014
Short description: | p11@CDKN2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CDKN2C_5end |
Coexpression cluster: | NA |
Association with transcript: | 340bp_to_ENST00000396148, NM_001262_5end |
EntrezGene: | CDKN2C |
HGNC: | 1789 |
UniProt: | P42773Q6ICV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 1.36e-11 | 3 |
hematopoietic oligopotent progenitor cell | 1.02e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-09 | 161 |
B-1 B cell | 1.12e-09 | 1 |
hematopoietic stem cell | 3.41e-09 | 168 |
hematopoietic cell | 1.39e-08 | 177 |
myeloid cell | 5.85e-07 | 108 |
common myeloid progenitor | 5.85e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 1.32e-09 | 1 |
cheek | 1.32e-09 | 1 |
parotid gland primordium | 1.32e-09 | 1 |
cranial nerve II | 2.16e-09 | 1 |
cranial nerve | 2.16e-09 | 1 |
nerve trunk | 2.16e-09 | 1 |
nerve connecting eye with brain | 2.16e-09 | 1 |
nerve | 2.16e-09 | 1 |
retinal neural layer | 2.16e-09 | 1 |
presumptive neural retina | 2.16e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.23e-37 | 51 |
immune system cancer | 4.23e-37 | 51 |
leukemia | 5.79e-32 | 39 |
myeloid leukemia | 5.34e-29 | 31 |
organ system cancer | 6.54e-12 | 137 |
lymphatic system cancer | 1.12e-09 | 1 |
lymphosarcoma | 1.12e-09 | 1 |
acute myeloid leukemia | 1.21e-09 | 1 |
chronic myeloid leukemia | 1.84e-09 | 1 |
lymphoma | 5.46e-08 | 10 |