FFCP PHASE1:Hg19::chr1:63988911..63988938,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23421 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6157 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000489863_5end | |||
|description=CAGE_peak_2_at_ITGB3BP_5end | |||
|id=chr1:63988911..63988938,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.74e-07;82 | |||
|ontology_enrichment_disease=DOID:162!2.13e-11!235;DOID:14566!2.42e-11!239;DOID:0050687!1.09e-10!143;DOID:305!6.87e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.37e-09,143;DOID:162,2.24e-08,235;DOID:14566,4.36e-08,239;DOID:305,1.53e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-23!115;UBERON:0001049!2.17e-14!57;UBERON:0005068!2.17e-14!57;UBERON:0006241!2.17e-14!57;UBERON:0007135!2.17e-14!57;UBERON:0001017!1.27e-13!82;UBERON:0005743!1.69e-13!86;UBERON:0000073!1.73e-13!94;UBERON:0001016!1.73e-13!94;UBERON:0000955!6.45e-13!69;UBERON:0006238!6.45e-13!69;UBERON:0002616!1.75e-11!59;UBERON:0002346!2.67e-11!90;UBERON:0003080!5.22e-11!42;UBERON:0003075!8.85e-11!86;UBERON:0007284!8.85e-11!86;UBERON:0002780!1.35e-10!41;UBERON:0001890!1.35e-10!41;UBERON:0006240!1.35e-10!41;UBERON:0002020!7.33e-09!34;UBERON:0003528!7.33e-09!34;UBERON:0001893!2.42e-08!34;UBERON:0002791!4.73e-08!33;UBERON:0001869!1.00e-07!32;UBERON:0000924!4.03e-07!173;UBERON:0006601!4.03e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;9.83e-09;53!UBERON:0002616;9.83e-09;53!UBERON:0002780;1.43e-08;41!UBERON:0001890;1.43e-08;41!UBERON:0007023;2.96e-08;114!UBERON:0000125;3.75e-07;9!UBERON:0002308;3.75e-07;9!UBERON:0002791;5.19e-07;32!UBERON:0003528;5.37e-07;34!UBERON:0002020;5.37e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.20e-25,114;UBERON:0001049,6.15e-15,56;UBERON:0005068,6.15e-15,56;UBERON:0006241,6.15e-15,56;UBERON:0007135,6.15e-15,56;UBERON:0001017,1.67e-13,81;UBERON:0000073,2.03e-13,53;UBERON:0002616,2.03e-13,53;UBERON:0001016,5.14e-13,89;UBERON:0000955,1.38e-12,68;UBERON:0006238,1.38e-12,68;UBERON:0002346,6.23e-11,86;UBERON:0002780,1.41e-10,41;UBERON:0001890,1.41e-10,41;UBERON:0003080,1.41e-10,41;UBERON:0006240,1.41e-10,41;UBERON:0003075,2.34e-10,82;UBERON:0007284,2.34e-10,82;UBERON:0011216,5.20e-10,223;UBERON:0003528,2.23e-08,34;UBERON:0002020,2.23e-08,34;UBERON:0001893,7.64e-08,34;UBERON:0010371,9.31e-08,104;UBERON:0002791,2.11e-07,32;UBERON:0000125,3.33e-07,9;UBERON:0002308,3.33e-07,9;UBERON:0001869,3.56e-07,32 | |||
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| |||
|short_description=p2@ITGB3BP | |||
}} |
Revision as of 18:49, 10 January 2014
Short description: | p2@ITGB3BP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ITGB3BP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000489863_5end |
EntrezGene: | ITGB3BP |
HGNC: | 6157 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 9.20e-25 | 114 |
neural tube | 6.15e-15 | 56 |
neural rod | 6.15e-15 | 56 |
future spinal cord | 6.15e-15 | 56 |
neural keel | 6.15e-15 | 56 |
central nervous system | 1.67e-13 | 81 |
regional part of nervous system | 2.03e-13 | 53 |
regional part of brain | 2.03e-13 | 53 |
nervous system | 5.14e-13 | 89 |
brain | 1.38e-12 | 68 |
future brain | 1.38e-12 | 68 |
neurectoderm | 6.23e-11 | 86 |
regional part of forebrain | 1.41e-10 | 41 |
forebrain | 1.41e-10 | 41 |
anterior neural tube | 1.41e-10 | 41 |
future forebrain | 1.41e-10 | 41 |
neural plate | 2.34e-10 | 82 |
presumptive neural plate | 2.34e-10 | 82 |
organ system subdivision | 5.20e-10 | 223 |
brain grey matter | 2.23e-08 | 34 |
gray matter | 2.23e-08 | 34 |
telencephalon | 7.64e-08 | 34 |
ecto-epithelium | 9.31e-08 | 104 |
regional part of telencephalon | 2.11e-07 | 32 |
neural nucleus | 3.33e-07 | 9 |
nucleus of brain | 3.33e-07 | 9 |
cerebral hemisphere | 3.56e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.37e-09 | 143 |
cancer | 2.24e-08 | 235 |
disease of cellular proliferation | 4.36e-08 | 239 |
carcinoma | 1.53e-07 | 106 |