FFCP PHASE1:Hg19::chr1:68512275..68512291,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:68512275..68512291,- | |||
|id=chr1:68512275..68512291,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;4.58e-23;1!CL:0002593;1.96e-12;2!CL:0002521;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,5.13e-23,1;CL:0002593,2.32e-12,2;CL:0002521,1.30e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.17e-14!14;DOID:193!5.93e-09!29;DOID:120!4.82e-08!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.23e-25;14!DOID:120;1.56e-13;27!DOID:193;1.25e-12;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.27e-25,14;DOID:120,1.59e-13,27;DOID:193,1.27e-12,29 | |||
|ontology_enrichment_uberon=UBERON:0000992!3.15e-12!13;UBERON:0002308!2.14e-09!9;UBERON:0000125!2.14e-09!9;UBERON:0002118!4.85e-09!5;UBERON:0004532!4.85e-09!5;UBERON:0010188!2.47e-08!3;UBERON:0002539!2.47e-08!3;UBERON:0008816!2.47e-08!3;UBERON:0001896!1.06e-07!3;UBERON:0005290!1.06e-07!3;UBERON:0010096!1.06e-07!3;UBERON:0002298!3.04e-07!8;UBERON:0000991!5.57e-07!21;UBERON:0009196!5.57e-07!21;UBERON:0009117!5.57e-07!21;UBERON:0005564!5.57e-07!21;UBERON:0002119!7.21e-07!4;UBERON:0004531!7.21e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;8.28e-19;5!UBERON:0000992;4.42e-16;13!UBERON:0002456;1.96e-12;2!UBERON:0000078;3.06e-12;2!UBERON:0002012;3.06e-12;2!UBERON:0008886;3.06e-12;2!UBERON:0000991;3.25e-10;21!UBERON:0002190;1.35e-08;3!UBERON:0003134;5.59e-07;33!UBERON:0002119;7.48e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,7.24e-19,5;UBERON:0000992,4.20e-16,13;UBERON:0002456,2.32e-12,2;UBERON:0000078,3.24e-12,2;UBERON:0007497,3.24e-12,2;UBERON:0003643,3.24e-12,2;UBERON:0003504,3.24e-12,2;UBERON:0003469,3.24e-12,2;UBERON:0003496,3.24e-12,2;UBERON:0002012,3.24e-12,2;UBERON:0008886,3.24e-12,2;UBERON:0007303,3.24e-12,2;UBERON:0002061,3.24e-12,2;UBERON:0005432,3.24e-12,2;UBERON:0004363,3.24e-12,2;UBERON:0000991,3.15e-10,21;UBERON:0009196,3.15e-10,21;UBERON:0009117,3.15e-10,21;UBERON:0005564,3.15e-10,21;UBERON:0004176,8.59e-10,22;UBERON:0002190,1.30e-08,3;UBERON:0004145,1.40e-08,3;UBERON:0002119,7.70e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,2.37600571456411,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0.600182192168805,0,0,0.18611685633159,0,0.68205903612839,0,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.602878754119172,0,1.79951384127703,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462145851343933,0.460511024178389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,2.11300293513511,0.136499911407986,0,1.13008116620243,0,0.66343897524122,0,0,0,0,0,0.845086807596724,0.286822704408103,0,0,0,0,0,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0.313808538937,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0.466311601748341,0.147855149989634,0.63718706865481,0,2.32894435314389,0.414706207840855,1.06336685823198,0,0,0.380805212168795,5.69619026486526,0.181848659202559,2.57785336901972,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0.785577949580009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr1:68512275..68512291,- | |||
}} |
Revision as of 19:01, 10 January 2014
Short description: | p@chr1:68512275..68512291, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:68512275..68512291, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 5.13e-23 | 1 |
smooth muscle cell of the internal thoracic artery | 2.32e-12 | 2 |
subcutaneous fat cell | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
right ovary | 7.24e-19 | 5 |
female gonad | 4.20e-16 | 13 |
internal thoracic artery | 2.32e-12 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 3.24e-12 | 2 |
developing epithelial placode | 3.24e-12 | 2 |
respiratory system arterial blood vessel | 3.24e-12 | 2 |
respiratory system blood vessel | 3.24e-12 | 2 |
respiratory system artery | 3.24e-12 | 2 |
head blood vessel | 3.24e-12 | 2 |
pulmonary artery | 3.24e-12 | 2 |
pulmonary vascular system | 3.24e-12 | 2 |
pharyngeal vasculature | 3.24e-12 | 2 |
truncus arteriosus | 3.24e-12 | 2 |
aortic sac | 3.24e-12 | 2 |
pharyngeal arch artery | 3.24e-12 | 2 |
gonad | 3.15e-10 | 21 |
indifferent external genitalia | 3.15e-10 | 21 |
indifferent gonad | 3.15e-10 | 21 |
gonad primordium | 3.15e-10 | 21 |
external genitalia | 8.59e-10 | 22 |
subcutaneous adipose tissue | 1.30e-08 | 3 |
outflow tract | 1.40e-08 | 3 |
left ovary | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.27e-25 | 14 |
female reproductive organ cancer | 1.59e-13 | 27 |
reproductive organ cancer | 1.27e-12 | 29 |