FFCP PHASE1:Hg19::chr10:13389654..13389710,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22929 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19685 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-10bp_to_uc001imj.2_5end | |||
|description=CAGE_peak_3_at_SEPHS1_5end | |||
|id=chr10:13389654..13389710,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.04e-16!115;UBERON:0001017!6.08e-13!82;UBERON:0001049!9.89e-13!57;UBERON:0005068!9.89e-13!57;UBERON:0006241!9.89e-13!57;UBERON:0007135!9.89e-13!57;UBERON:0005743!1.04e-12!86;UBERON:0000073!2.41e-12!94;UBERON:0001016!2.41e-12!94;UBERON:0002346!5.26e-12!90;UBERON:0003075!7.72e-12!86;UBERON:0007284!7.72e-12!86;UBERON:0000955!1.03e-11!69;UBERON:0006238!1.03e-11!69;UBERON:0000924!1.18e-11!173;UBERON:0006601!1.18e-11!173;UBERON:0004121!2.11e-11!169;UBERON:0000153!2.26e-11!129;UBERON:0007811!2.26e-11!129;UBERON:0000033!3.39e-11!123;UBERON:0002616!3.12e-10!59;UBERON:0003080!8.70e-09!42;UBERON:0002780!2.44e-08!41;UBERON:0001890!2.44e-08!41;UBERON:0006240!2.44e-08!41;UBERON:0000064!4.37e-08!219;UBERON:0003056!1.15e-07!61;UBERON:0001893!2.22e-07!34;UBERON:0002020!2.60e-07!34;UBERON:0003528!2.60e-07!34;UBERON:0002791!3.38e-07!33;UBERON:0000481!3.68e-07!347;UBERON:0000477!4.50e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.07e-07;53!UBERON:0002616;3.07e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.39e-16,114;UBERON:0011216,7.05e-14,223;UBERON:0004121,1.06e-12,171;UBERON:0000924,1.06e-12,171;UBERON:0006601,1.06e-12,171;UBERON:0002346,1.07e-12,86;UBERON:0003075,1.50e-12,82;UBERON:0007284,1.50e-12,82;UBERON:0001017,1.57e-12,81;UBERON:0001049,3.25e-12,56;UBERON:0005068,3.25e-12,56;UBERON:0006241,3.25e-12,56;UBERON:0007135,3.25e-12,56;UBERON:0001016,3.95e-12,89;UBERON:0000955,3.06e-11,68;UBERON:0006238,3.06e-11,68;UBERON:0000073,8.79e-11,53;UBERON:0002616,8.79e-11,53;UBERON:0010314,3.65e-09,132;UBERON:0010371,9.77e-09,104;UBERON:0002780,2.72e-08,41;UBERON:0001890,2.72e-08,41;UBERON:0003080,2.72e-08,41;UBERON:0006240,2.72e-08,41;UBERON:0003056,1.78e-07,61;UBERON:0001893,2.50e-07,34;UBERON:0003528,2.93e-07,34;UBERON:0002020,2.93e-07,34;UBERON:0002791,8.49e-07,32 | |||
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| |||
|short_description=p3@SEPHS1 | |||
}} |
Revision as of 01:46, 11 January 2014
Short description: | p3@SEPHS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SEPHS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_uc001imj.2_5end |
EntrezGene: | SEPHS1 |
HGNC: | 19685 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.39e-16 | 114 |
organ system subdivision | 7.05e-14 | 223 |
ectoderm-derived structure | 1.06e-12 | 171 |
ectoderm | 1.06e-12 | 171 |
presumptive ectoderm | 1.06e-12 | 171 |
neurectoderm | 1.07e-12 | 86 |
neural plate | 1.50e-12 | 82 |
presumptive neural plate | 1.50e-12 | 82 |
central nervous system | 1.57e-12 | 81 |
neural tube | 3.25e-12 | 56 |
neural rod | 3.25e-12 | 56 |
future spinal cord | 3.25e-12 | 56 |
neural keel | 3.25e-12 | 56 |
nervous system | 3.95e-12 | 89 |
brain | 3.06e-11 | 68 |
future brain | 3.06e-11 | 68 |
regional part of nervous system | 8.79e-11 | 53 |
regional part of brain | 8.79e-11 | 53 |
structure with developmental contribution from neural crest | 3.65e-09 | 132 |
ecto-epithelium | 9.77e-09 | 104 |
regional part of forebrain | 2.72e-08 | 41 |
forebrain | 2.72e-08 | 41 |
anterior neural tube | 2.72e-08 | 41 |
future forebrain | 2.72e-08 | 41 |
pre-chordal neural plate | 1.78e-07 | 61 |
telencephalon | 2.50e-07 | 34 |
brain grey matter | 2.93e-07 | 34 |
gray matter | 2.93e-07 | 34 |
regional part of telencephalon | 8.49e-07 | 32 |