FFCP PHASE1:Hg19::chr10:24331232..24331243,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_at_chr10:24331232..24331243,+ | |||
|id=chr10:24331232..24331243,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.86e-07;4!CL:0002222;1.86e-07;4!CL:0002224;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,2.04e-07,4;CL:0002222,2.04e-07,4;CL:0002224,2.04e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.09e-49;2!UBERON:0000358;3.58e-26;1!UBERON:0005754;8.64e-26;1!UBERON:0003918;8.06e-11;10!UBERON:0007687;8.06e-11;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!4.03e-27!22;UBERON:0001893!8.67e-27!34;UBERON:0001950!5.46e-25!20;UBERON:0001869!6.98e-25!32;UBERON:0002791!4.71e-24!33;UBERON:0000956!1.04e-23!25;UBERON:0000203!1.04e-23!25;UBERON:0007023!4.91e-22!115;UBERON:0002780!8.96e-22!41;UBERON:0001890!8.96e-22!41;UBERON:0006240!8.96e-22!41;UBERON:0003080!3.43e-21!42;UBERON:0002020!4.86e-20!34;UBERON:0003528!4.86e-20!34;UBERON:0003056!7.33e-16!61;UBERON:0001049!7.23e-15!57;UBERON:0005068!7.23e-15!57;UBERON:0006241!7.23e-15!57;UBERON:0007135!7.23e-15!57;UBERON:0002616!2.90e-14!59;UBERON:0000955!2.65e-13!69;UBERON:0006238!2.65e-13!69;UBERON:0000200!1.34e-12!6;UBERON:0000341!1.73e-11!2;UBERON:0001017!1.03e-10!82;UBERON:0003075!2.60e-10!86;UBERON:0007284!2.60e-10!86;UBERON:0005743!4.49e-10!86;UBERON:0000153!5.61e-10!129;UBERON:0007811!5.61e-10!129;UBERON:0001871!8.43e-10!7;UBERON:0002346!1.04e-09!90;UBERON:0001872!7.32e-09!5;UBERON:0000073!7.88e-09!94;UBERON:0001016!7.88e-09!94;UBERON:0000033!3.46e-08!123;UBERON:0006947!7.46e-08!3;UBERON:0004054!7.46e-08!3;UBERON:0002771!2.34e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;1.88e-50;2!UBERON:0006947;1.50e-33;3!UBERON:0004054;1.50e-33;3!UBERON:0000998;8.64e-26;1!UBERON:0001301;8.64e-26;1!UBERON:0006868;8.64e-26;1!UBERON:0005904;1.84e-25;4!UBERON:0000974;1.33e-17;6!UBERON:0000058;8.06e-11;10!UBERON:0003135;6.34e-10;11!UBERON:0010077;1.86e-07;4!UBERON:0005389;1.86e-07;4!UBERON:0000484;1.86e-07;4!UBERON:0000965;1.86e-07;4!UBERON:0001803;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.88e-50,2;UBERON:0006947,1.08e-33,3;UBERON:0004054,1.08e-33,3;UBERON:0000998,5.93e-26,1;UBERON:0006868,5.93e-26,1;UBERON:0001301,7.62e-26,1;UBERON:0005904,1.43e-25,4;UBERON:0000080,5.83e-12,9;UBERON:0002120,5.83e-12,9;UBERON:0004875,5.83e-12,9;UBERON:0005721,5.83e-12,9;UBERON:0005754,5.83e-12,9;UBERON:0007297,5.83e-12,9;UBERON:0000974,5.69e-11,10;UBERON:0003135,5.79e-10,11;UBERON:0004876,5.79e-10,11;UBERON:0002113,3.25e-09,26;UBERON:0003918,3.25e-09,26;UBERON:0011143,3.25e-09,26;UBERON:0005095,3.25e-09,26;UBERON:0007687,3.25e-09,26;UBERON:0003887,3.27e-09,12;UBERON:0000489,7.90e-08,31;UBERON:0010077,2.04e-07,4;UBERON:0005389,2.04e-07,4;UBERON:0000484,2.04e-07,4;UBERON:0002546,2.04e-07,4;UBERON:0000965,2.04e-07,4;UBERON:0001803,2.04e-07,4;UBERON:0003073,2.04e-07,4;UBERON:0005426,2.04e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04337364477569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0,0,0.451961481561065,0,0,0.253243183823515,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.425246896606173,0,0.0788057072991982,1.10154635083496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0,0.983617892129413,0,0,0,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,2.77204176471275,2.14257988317366,0,0,0,0.572824424503484,18.392664195198,0,0,0,0,0.665320713092027,0,0,0,0,2.34640942403454,0.366724332548599,0,0,0,0 | |||
|short_description=p@chr10:24331232..24331243,+ | |||
}} |
Revision as of 02:11, 11 January 2014
Short description: | p@chr10:24331232..24331243, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr10:24331232..24331243, + |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.04e-07 | 4 |
vertebrate lens cell | 2.04e-07 | 4 |
lens epithelial cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
throat | 1.88e-50 | 2 |
male genital duct | 1.08e-33 | 3 |
internal male genitalia | 1.08e-33 | 3 |
seminal vesicle | 5.93e-26 | 1 |
seminal fluid secreting gland | 5.93e-26 | 1 |
epididymis | 7.62e-26 | 1 |
duct of male reproductive system | 1.43e-25 | 4 |
mesonephros | 5.83e-12 | 9 |
pronephros | 5.83e-12 | 9 |
nephrogenic cord | 5.83e-12 | 9 |
pronephric mesoderm | 5.83e-12 | 9 |
rostral part of nephrogenic cord | 5.83e-12 | 9 |
presumptive pronephric mesoderm | 5.83e-12 | 9 |
neck | 5.69e-11 | 10 |
male reproductive organ | 5.79e-10 | 11 |
urogenital ridge | 5.79e-10 | 11 |
kidney | 3.25e-09 | 26 |
kidney mesenchyme | 3.25e-09 | 26 |
upper urinary tract | 3.25e-09 | 26 |
kidney rudiment | 3.25e-09 | 26 |
kidney field | 3.25e-09 | 26 |
intraembryonic coelom | 3.27e-09 | 12 |
cavitated compound organ | 7.90e-08 | 31 |
cuboidal epithelium | 2.04e-07 | 4 |
transparent eye structure | 2.04e-07 | 4 |
simple cuboidal epithelium | 2.04e-07 | 4 |
cranial placode | 2.04e-07 | 4 |
lens of camera-type eye | 2.04e-07 | 4 |
epithelium of lens | 2.04e-07 | 4 |
lens placode | 2.04e-07 | 4 |
lens vesicle | 2.04e-07 | 4 |