FFCP PHASE1:Hg19::chr10:54259346..54259353,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C234 | |||
|description=CAGE_peak_at_chr10:54259346..54259353,+ | |||
|id=chr10:54259346..54259353,+ | |||
|ontology_enrichment_celltype=CL:0002251!2.11e-10!21;CL:1000415!7.52e-08!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!7.08e-24!14;DOID:305!1.21e-16!106;DOID:3151!7.13e-15!1;DOID:3149!7.13e-15!1;DOID:0050687!5.60e-12!143;DOID:7!6.21e-12!39;DOID:162!1.68e-09!235;DOID:14566!2.87e-09!239;DOID:3451!4.38e-08!2;DOID:4159!4.38e-08!2;DOID:0060122!4.38e-08!2;DOID:4074!6.58e-08!2;DOID:4905!6.58e-08!2;DOID:3498!6.58e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3151;3.99e-50;1!DOID:3149;3.99e-50;1!DOID:3451;7.14e-26;2!DOID:4159;7.14e-26;2!DOID:0060122;7.14e-26;2!DOID:1749;3.17e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,6.58e-50,1;DOID:3149,6.58e-50,1;DOID:3451,9.18e-26,2;DOID:4159,9.18e-26,2;DOID:0060122,9.18e-26,2;DOID:1749,2.95e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0003343!1.16e-30!4;UBERON:0004785!1.16e-30!4;UBERON:0003729!1.11e-24!5;UBERON:0002294!1.74e-17!7;UBERON:0001173!1.74e-17!7;UBERON:0004912!1.74e-17!7;UBERON:0000997!1.41e-14!1;UBERON:0005056!1.41e-14!1;UBERON:0002394!3.85e-14!4;UBERON:0003928!3.85e-14!4;UBERON:0000974!1.13e-12!10;UBERON:0000344!1.17e-10!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;8.81e-14;4!UBERON:0004785;8.81e-14;4!UBERON:0000014;1.13e-13;4!UBERON:0000974;1.22e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,8.82e-14,4;UBERON:0004785,8.82e-14,4;UBERON:0000014,1.29e-13,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0.716084698702437,0,0,0,0,0,0,0,0,0,0,1.365521379426,0,0,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587954384486266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400794101257669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08515854706359,0.471878893390961,0,0.808679663052368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:54259346..54259353,+ | |||
}} |
Revision as of 02:51, 11 January 2014
Short description: | p@chr10:54259346..54259353, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:54259346..54259353, + |
Coexpression cluster: | C234_oral_epidermoid_malignant_cervical_ductal_lung_keratoacanthoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 8.82e-14 | 4 |
respiratory system mucosa | 8.82e-14 | 4 |
zone of skin | 1.29e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 6.58e-50 | 1 |
keratoacanthoma | 6.58e-50 | 1 |
skin carcinoma | 9.18e-26 | 2 |
skin cancer | 9.18e-26 | 2 |
integumentary system cancer | 9.18e-26 | 2 |
squamous cell carcinoma | 2.95e-15 | 14 |