FFCP PHASE1:Hg19::chr10:74653522..74653535,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170392 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29953 | |||
|TSSclassifier=not | |||
|UniProt=Q8WWZ8,C9JXV7 | |||
|association_with_transcript=183bp_to_ENST00000334011,ENST00000415725,NM_152635,uc001jte.1,uc009xqs.1_5end | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_2_at_OIT3_5end | |||
|id=chr10:74653522..74653535,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.69e-09!12;CL:0000417!1.69e-09!12;CL:0000668!1.69e-09!12;CL:0000414!1.69e-09!12;CL:0000412!1.69e-09!12;CL:0000182!1.69e-09!12;CL:0002548!1.36e-08!6;CL:0002262!3.09e-07!2;CL:1000398!3.09e-07!2;CL:0002494!4.71e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.09e-19;12!CL:0002262;1.29e-13;2!CL:1000398;1.29e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.22e-19,12;CL:0002262,1.37e-13,2;CL:1000398,1.37e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.32e-10;11!UBERON:0009497;1.11e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!7.26e-22!26;UBERON:0002106!7.30e-17!3;UBERON:0004854!7.30e-17!3;UBERON:0009034!7.30e-17!3;UBERON:0002095!7.30e-17!3;UBERON:0004782!7.30e-17!3;UBERON:0003281!7.30e-17!3;UBERON:0009664!7.30e-17!3;UBERON:0002296!7.30e-17!3;UBERON:0005602!7.30e-17!3;UBERON:0001179!7.30e-17!3;UBERON:0006293!7.30e-17!3;UBERON:0002107!1.11e-15!19;UBERON:0006925!1.11e-15!19;UBERON:0008836!1.11e-15!19;UBERON:0008835!1.55e-13!22;UBERON:0003894!1.55e-13!22;UBERON:0007029!4.77e-13!1;UBERON:0009854!6.03e-13!23;UBERON:0002135!7.68e-13!1;UBERON:0000948!5.84e-12!24;UBERON:0005498!5.84e-12!24;UBERON:0004140!5.84e-12!24;UBERON:0009881!5.84e-12!24;UBERON:0004141!5.84e-12!24;UBERON:0003084!5.84e-12!24;UBERON:0007005!5.84e-12!24;UBERON:0004139!5.84e-12!24;UBERON:0004291!5.84e-12!24;UBERON:0007499!6.63e-12!25;UBERON:0009497!6.63e-12!25;UBERON:0000015!6.63e-12!25;UBERON:0002423!6.63e-12!25;UBERON:0006235!6.63e-12!25;UBERON:0004161!6.63e-12!25;UBERON:0002368!7.28e-12!35;UBERON:0009856!1.92e-11!26;UBERON:0007100!1.26e-10!27;UBERON:0001048!4.66e-10!168;UBERON:0005172!5.05e-10!55;UBERON:0005173!5.05e-10!55;UBERON:0002365!1.39e-09!31;UBERON:0002330!1.39e-09!31;UBERON:0000949!3.81e-09!45;UBERON:0002417!5.67e-09!61;UBERON:0000916!5.67e-09!61;UBERON:0003914!1.16e-08!118;UBERON:0004872!5.02e-08!84;UBERON:0004177!9.56e-08!7;UBERON:0003929!1.48e-07!54;UBERON:0002133!4.69e-07!2;UBERON:0000945!7.01e-07!8;UBERON:0010039!7.01e-07!8;UBERON:0002530!7.03e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.12e-32;19!UBERON:0006925;1.12e-32;19!UBERON:0002423;6.08e-25;25!UBERON:0002365;3.94e-20;31!UBERON:0002330;3.94e-20;31!UBERON:0002368;1.10e-16;33!UBERON:0001281;1.29e-13;2!UBERON:0003497;1.29e-13;2!UBERON:0003909;1.29e-13;2!UBERON:0003835;1.29e-13;2!UBERON:0002417;3.56e-12;58!UBERON:0000916;3.56e-12;58!UBERON:0000949;3.26e-11;43!UBERON:0005172;8.91e-11;52!UBERON:0005173;8.91e-11;52!UBERON:0002106;1.05e-09;3!UBERON:0001280;1.60e-09;3!UBERON:0004647;1.60e-09;3!UBERON:0001007;2.49e-07;81!UBERON:0002530;5.21e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.12e-32,19;UBERON:0006925,1.12e-32,19;UBERON:0008836,1.12e-32,19;UBERON:0008835,2.77e-28,22;UBERON:0003894,2.77e-28,22;UBERON:0009854,4.49e-27,23;UBERON:0007499,6.08e-25,25;UBERON:0009497,6.08e-25,25;UBERON:0000015,6.08e-25,25;UBERON:0002423,6.08e-25,25;UBERON:0006235,6.08e-25,25;UBERON:0004161,6.08e-25,25;UBERON:0009856,5.33e-24,26;UBERON:0002365,3.42e-20,31;UBERON:0002330,3.42e-20,31;UBERON:0002368,6.32e-18,35;UBERON:0005172,1.21e-16,54;UBERON:0005173,1.21e-16,54;UBERON:0002417,5.37e-15,60;UBERON:0000916,5.37e-15,60;UBERON:0000949,5.17e-14,45;UBERON:0001281,1.37e-13,2;UBERON:0003497,1.37e-13,2;UBERON:0003909,1.37e-13,2;UBERON:0003835,1.37e-13,2;UBERON:0003929,1.01e-11,54;UBERON:0002530,9.48e-11,59;UBERON:0001041,2.24e-10,87;UBERON:0002106,1.10e-09,3;UBERON:0004854,1.10e-09,3;UBERON:0009034,1.10e-09,3;UBERON:0002095,1.10e-09,3;UBERON:0004782,1.10e-09,3;UBERON:0003281,1.10e-09,3;UBERON:0009664,1.10e-09,3;UBERON:0002296,1.10e-09,3;UBERON:0005602,1.10e-09,3;UBERON:0001179,1.10e-09,3;UBERON:0006293,1.10e-09,3;UBERON:0001280,1.67e-09,3;UBERON:0004647,1.67e-09,3;UBERON:0005171,1.67e-09,3;UBERON:0005177,6.05e-09,101;UBERON:0009569,4.56e-08,112;UBERON:0005911,8.69e-08,82;UBERON:0004921,1.36e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69077727312324,0,0,0,1.26755034821831,0,6.49868897349544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81251743096572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14232723417828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.23279072171919,7.95041333473328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.751871343838829,9.08856220427438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@OIT3 | |||
}} |
Revision as of 03:28, 11 January 2014
Short description: | p2@OIT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OIT3_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | 183bp_to_ENST00000334011, ENST00000415725, NM_152635, uc001jte.1, uc009xqs.1_5end |
EntrezGene: | OIT3 |
HGNC: | 29953 |
UniProt: | Q8WWZ8C9JXV7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.22e-19 | 12 |
endothelial cell of sinusoid | 1.37e-13 | 2 |
endothelial cell of hepatic sinusoid | 1.37e-13 | 2 |