FFCP PHASE1:Hg19::chr10:88729979..88729997,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:88729979..88729997,- | |||
|id=chr10:88729979..88729997,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002327;3.75e-10;4!CL:0000575;1.45e-09;2!CL:0002537;2.16e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,3.14e-10,4;CL:0000575,1.13e-09,2;CL:0002537,1.51e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.45e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!8.32e-08!95;UBERON:0007023!7.98e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;3.75e-10;4!UBERON:0000964;4.45e-10;4!UBERON:0010409;4.45e-10;4!UBERON:0005631;5.42e-07;10!UBERON:0000158;5.42e-07;10!UBERON:0010313;7.79e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,3.14e-10,4;UBERON:0005333,3.14e-10,4;UBERON:0008425,3.14e-10,4;UBERON:0005311,3.14e-10,4;UBERON:0000964,6.21e-10,4;UBERON:0010409,6.21e-10,4;UBERON:0004348,6.21e-10,4;UBERON:0005427,6.21e-10,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0.247532705920093,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.434539556882471,0,0,0,0,0,0.458426764241994,2.5500670180478,1.48313777113772,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0.573673241497627,0.709336764396714,0,1.06748995729705,0,0.311211035399766,0.134710672069688,0,0.605429710579726,0,0,0,0,0,0,0,0,0.408308342509787,0,0.619954687054593,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.600182192168805,0.309157587715317,0,0.37223371266318,0.168776332241266,0,0.504867548488229,0.460249493211497,1.13152239773168,0.355009592516614,0.403008392910561,0.339121184620975,1.15956511897978,0,0.860413786167011,0,0.132529768321485,0,0.518305275076852,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,1.1240175325762,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,0,0,0.144366447761074,0,0,0.790204397959275,0,0,0,0,0,0,0,1.88072897675981,3.19697332365358,1.15014803749563,0,0,2.07328115540772,1.58531948758658,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50051156317903,0,0.207970861530807,0.713715955188647,0,0.937131319941706,0,0,0,0,0.184369168541703,0.521301686808497,0.587403472388222,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0,0.256278298511402,0,0,0,0.308419387605311,0.177561725313127,0.821271560138091,0.519254429183621,0.697262270759755,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0.127612712494584,0,0,0.31481234683064,0,0,0.532306030317022,0.869932992075073,0.37064843820784,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0.404364963146632,1.58510321173008,0,0,0,1.05650146756755,0.136499911407986,0.282810863907425,1.13008116620243,0.551365343546124,0.66343897524122,1.31535265576129,0.578775534266688,0,0,0.30982349809975,1.40847801266121,0,0,0,1.41904425628239,1.47775344708365,0.329294892959902,0.379473173765715,0,0.192444225451024,0,0,0.847294206991012,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,2.69544237579135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.586032717087576,0,0,0.852408440419239,2.62618933211459,1.78178808499583,2.45728561679386,0,0,1.78093928036649,0,0,2.19172787076177,0,0,0,1.35393286007176,0,0,0,0,0.493217028184668,0,0,0,0,0,0.260427761085233,0,0.724999575434793,1.365521379426,0.508507300585533,0.472775363535873,1.03423011972439,0,0,0.885741385813839,0,0,0.110579259931225,0,0.438770794307945,0.10893846351899,0.41827123283581,1.23120413606075,0,0,0,0,1.27600463892768,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.176915129006678,0,0,0,0,0.269604531922708,0,0,0,0.586993856796269,0.242780379534093,0.394584402849391,0,0,1.26373159256976,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0,1.95984794828755,0,1.04836000945218,0.51595809741485,0,0,0,0.387956065953678,0,0.451961481561065,0.959293472527256,0.19871461170299,0.126621591911757,0.977756913674015,0,0.640358984218058,0.19980960958213,0,0,0,0,0.745515213392595,0.235694034616795,0.543616824294456,0.418411385249333,0.101998217636322,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.121499113316049,0,0,0.0524545881349981,0.105600336519406,0,0.383830394638891,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.533937062838473,0,0,0,0,0,0.638341257770182,2.72008901684737,0.5013797880454,3.36980134439808,1.96723578425883,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.372578417648301,0,0,0,0,1.41159491818903,0,0,0,0,1.66441758450784,0.378806010550178,0,0.889811221596536,0.686520205190771,0,0.621748802331122,0.295710299979268,0.159296767163702,0,0,0.829412415681711,0,0,0,0,0,0,0.322231671127465,0,0,0,0.343395705182793,0,0,0,0,0.260994291965212,0,0.231522474323834,0.244736704506468,0.179088841081487,0.308801447160972,0,0.706756583783524,0,0.337884881306145,0,0.345430341731199,0.303859956177382,0.138258436151731,0.584580926518165,0,0,0,0,0,0,0,0,0,0,0.839277046316667,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0,0,0.138314504928436,0,0,1.86480665151949,0,0.183428598521679,0,0,0,0,0.902523940191087,0,0.781514011233092,0,0,0.591424344868181,0,0,0.206686796501184,0.0634158101939068,0,0.548257766857182,0.496211178389294,0.351742488719241,0,0,0,0,0.455324382702595,0.975726071789027,0,0,0.135939465953663,0.0657727735628491,0,0.444925607568277,0.156986185701028,0,0,0,0,2.38875843943525,0.500335809236594,0,0,0,0,0.207216164163037,0.51215543128185,0.691259661814092,1.72090943528111,0,0,0.423387050190929,0.68732060563215,0,0,0,0.392600934460972,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,0,0.743990036333503,1.38652688589425,1.29787968637137,0,0,0.380095503034311,0,0.26721740526556,0.735159196278759,0,0.530450887527676,0.535928260312357,0,0,0,0.23806443146374,0,0,0.224263725161227,0.190941474834495,0,1.74173398317569,0,0.26940821205835,0.0717222053926763,0,0,0,0,0.538951212639521,0,0.855690109280065,0,0.665756774185513,1.00636896795513,0 | |||
|short_description=p@chr10:88729979..88729997,- | |||
}} |
Revision as of 03:57, 11 January 2014
Short description: | p@chr10:88729979..88729997, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:88729979..88729997, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 3.14e-10 | 4 |
corneal epithelial cell | 1.13e-09 | 2 |
amnion mesenchymal stem cell | 1.51e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 3.14e-10 | 4 |
mammary bud | 3.14e-10 | 4 |
mammary ridge | 3.14e-10 | 4 |
mammary placode | 3.14e-10 | 4 |
cornea | 6.21e-10 | 4 |
eye surface | 6.21e-10 | 4 |
optic eminence | 6.21e-10 | 4 |
corneal primordium | 6.21e-10 | 4 |